FC918221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918221 vs. ExPASy Swiss-Prot
Match: COBW_PSEDE (Protein cobW OS=Pseudomonas denitrificans GN=cobW PE=3 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 1.973e-29 Identity = 77/185 (41.62%), Postives = 119/185 (64.32%), Query Frame = 1 Query: 364 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLV---AAKTTGAEDIVLLNNGCLCCTVRGDLVRMISELVSKKKGKFDHIVIETTGLANPAPIIQTFYAEDAIFNEVKLDGVVTLVD--AKHAGFHLDE--------VKPKGVVNEA------VEQIAYADRIIVNKTDL 861 +IPAT+ITGFLG+GKTT++ ++L GKRI +I NE+G++ +DG ++ A+ +DI+ L NGC+CCTV D + +++L+ +++ + DHI+IET+GLA P P+I F D I +EV +DGVVT+VD A AG D+ V+ + +E+ +Q+ AD I++NKTDL Sbjct: 10 KIPATVITGFLGAGKTTMIRNLLQNADGKRIGLIINEFGDLGVDGDVLKGCGAEACTEDDIIELTNGCICCTVADDFIPTMTKLL-ERENRPDHIIIETSGLALPQPLIAAFNWPD-IRSEVTVDGVVTVVDSAAVAAGRFADDHDKVDALRVEDDNLDHESPIEELFEDQLTAADLIVLNKTDL 192
BLAST of FC918221 vs. ExPASy Swiss-Prot
Match: P47K_PSECL (47 kDa protein OS=Pseudomonas chlororaphis PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.412e-27 Identity = 67/185 (36.22%), Postives = 111/185 (60.00%), Query Frame = 1 Query: 364 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTT---GAEDIVLLNNGCLCCTVRGDLVRMISELVSKKKGKFDHIVIETTGLANPAPIIQTFYAED----AIFNEVKLDGVVTLVDAKHAGFHLD------------EVKPKGVVNEAVEQIAYADRIIVNKTDL 861 R+P T+++GFLG+GKTTLLN IL G R+AVI N+ EV++D V + G ++++ ++NGC+CCT+R DL+ IS+L ++ +FD+++IE+TG++ P P+ +TF D ++ +LD +VT+VD L+ + + + +EQ+ YA+ I+VNK DL Sbjct: 9 RLPVTVLSGFLGAGKTTLLNAILRNRQGLRVAVIVNDMSEVNLDAESVQRDVSLHRGRDELIEMSNGCICCTLRADLLEQISDLA--RQQRFDYLLIESTGISEPMPVAETFAFLDTEGFSLSELARLDTLVTVVDGSQFQALLESTDTVARADTEAHTSTRHLADLLIEQVEYANVILVNKRDL 191
BLAST of FC918221 vs. ExPASy Swiss-Prot
Match: COBW_PSEAE (Protein cobW OS=Pseudomonas aeruginosa GN=cobW PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.150e-27 Identity = 74/189 (39.15%), Postives = 110/189 (58.20%), Query Frame = 1 Query: 364 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTTGAED------IVLLNNGCLCCTVRGDLVRMISELVSKKKGKFDHIVIETTGLANPAPIIQTFYAEDAIFNEVKLDGVVTLVDA------------------KHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTD 858 ++P TI+TGFLG+GKTTLL H+L G+RIAVI NE+GE+ IDG ++ + G + + L NGCLCCTV+ + ++ ELV+ ++G D I+IET+GLA P P++Q F + I N +D V+T+VD+ + +LD P + E +Q+A AD +I+NK D Sbjct: 31 KLPVTIVTGFLGAGKTTLLRHMLDNAEGRRIAVIVNEFGELGIDGEILKQCSIGCSEEEAQGRVFELANGCLCCTVQEEFFPVMRELVA-RRGDLDQILIETSGLALPKPLVQAFQWPE-IRNACTVDAVITVVDSPAVAAGTFAAHPEQVDQQRRQDPNLDHESPLHELFE--DQLASADLVILNKAD 215
BLAST of FC918221 vs. ExPASy Swiss-Prot
Match: YCIC_BACSU (Putative metal chaperone yciC OS=Bacillus subtilis GN=yciC PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.016e-27 Identity = 73/188 (38.83%), Postives = 115/188 (61.17%), Query Frame = 1 Query: 364 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAK---TTGAEDIVLLNNGCLCCTVRGDLVRMISELVSKKKGKFDHIVIETTGLANPAPIIQTF-YAEDAIFNEV----KLDGVVTLVDAKHAGFH--------------LDEVKPKGVVNEAVEQIAYADRIIVNKTDL 861 +IP T+++G+LG+GKTTLLN IL G +IAVI N+ EV+ID LV + + E +V ++NGC+CCT+R DL+ + +L K G+FD+IVIE+TG++ P P+ QTF Y ++ + ++ +LD +VT+VDA +H L E + + + ++QI + D +I+NK DL Sbjct: 3 KIPVTVLSGYLGAGKTTLLNSILQNREGLKIAVIVNDMSEVNIDAGLVKQEGGLSRTDEKLVEMSNGCICCTLREDLLIEVEKLA--KDGRFDYIVIESTGISEPIPVAQTFSYIDEEMGIDLTKFCQLDTMVTVVDANRF-WHDYQSGESLLDRKEALGEKDEREIADLLIDQIEFCDVLILNKCDL 187
BLAST of FC918221 vs. ExPASy Swiss-Prot
Match: Y4527_DICDI (COBW domain-containing protein DDB_G0274527 OS=Dictyostelium discoideum GN=DDB_G0274527 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.164e-27 Identity = 68/200 (34.00%), Postives = 117/200 (58.50%), Query Frame = 1 Query: 346 KIPPDNRIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLV----------AAKTTGAEDIVLLNNGCLCCTVRGDLVRMISELVSKKKGKFDHIVIETTGLANPAPIIQTFYAE-----DAIFNEVKLDGVVTLVDA-------------KHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTDL 861 K+ ++P ++++GFLGSGKTTLLN+IL + HG +IAVI N+ EV+ID L+ A E +V ++NGC+CCT+R DL+ +++L +K +FD+++IE++G++ P PI +TF E + + + KLD +VT+VD K + + +V+ ++Q+ +++ I++NK DL Sbjct: 36 KVRGFEKLPVSVLSGFLGSGKTTLLNYILNSNHGLKIAVIVNDMSEVNIDSKLILENEFKITRTKATEKQVEAVVEMSNGCICCTMREDLLVEVTKLAKEK--RFDYLIIESSGISEPLPIAETFTFEIDGSIENLKDYTKLDTMVTVVDCSTWLEQYQSGESLKDKDMQATDQDERSLVDLLLDQVEFSNVILLNKCDL 233
BLAST of FC918221 vs. ExPASy Swiss-Prot
Match: YEIR_ECOLI (Uncharacterized protein yeiR OS=Escherichia coli (strain K12) GN=yeiR PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.162e-13 Identity = 58/163 (35.58%), Postives = 89/163 (54.60%), Query Frame = 1 Query: 379 IITGFLGSGKTTLLNHILT-AEHGKRIAVIENEYGEVDIDGSLVAAKTTGAEDIVLLNNGCLCCTVRGDLVRMISELVSKKKGKFDHIVIETTGLANPAPIIQTFYAEDAIFNE-VKLDGVVTLVDAKHAGFHLDEVKPKGVVNEAV-EQIAYADRIIVNKTD 858 +ITGFLGSGKTT + H+L + ++ AV+ NE+GEV IDG+L+A ++I GC+CC L + ++GK D ++IE TGL +P I+ A ++ + L + ++D + LDE K NE +Q+A AD I+ NK+D Sbjct: 6 LITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEI---PGGCMCCV--NGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQILDLLTA--PVYEPWIDLRATLCILDPR---LLLDE---KSASNENFRDQLAAADIIVANKSD 155 The following BLAST results are available for this feature:
BLAST of FC918221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC918221 ID=FC918221; Name=FC918221; organism=Citrus clementina; type=EST; length=869bpback to top |