FC918250
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370 OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 3.361e-26 Identity = 86/253 (33.99%), Postives = 131/253 (51.78%), Query Frame = 1 Query: 124 GQIQRALQTLDCG-------AYGRLIQHFTDYRLPRQAKQLHARLI--FHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNR-DIVSWNSMIAGYSQGGFYEECKALFREM-LNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 G + A Q LD A+ +++ R Q +QLH+R+ F S D FLA KL+ Y K SL A VFD++ ++ F++N M+ AY + L L+ ++ + + + +LKA L RD R E+HS +++ G S+ F+VN L++ Y++ DD+++AR LFDG + D V WNS+++ YS G E LFREM + P P+ T+VS L AC S G E+H Sbjct: 62 GVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV---EGVPLGLSSFPALLKACAKL-RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPA--PNSYTIVSALTACDGFSYAKLGKEIH 307 HSP 2 Score: 95.9005 bits (237), Expect = 3.047e-19 Identity = 58/210 (27.62%), Postives = 108/210 (51.43%), Query Frame = 1 Query: 220 QLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +LHA +I H + + + LI+ YSK N F ++ K + S+ ++ Y+ +D + + L LF +A + ++ D + +L+A + + + KE+H ++LR GL ++ + N L+ Y +C ++ A +F+ + +D+VSW SMI+ + G E LFR M+ + L D V ++ +L A S + G E+H Sbjct: 407 ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK---KRMEIDEMILGSILRA-SSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG-LSADSVALLCILSAAASLSALNKGREIH 610 HSP 3 Score: 93.5893 bits (231), Expect = 1.512e-18 Identity = 63/245 (25.71%), Postives = 123/245 (50.20%), Query Frame = 1 Query: 118 NSGQIQRALQTLDCGAYGRLIQHFTDYRLPRQAKQLHARLIFHSV-APDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 NS I AL D +Y +L K++HA ++ S + + ++ + LI Y++ + QA + ++ + + ++N+++ Y + MY + L FS + ++ K D ++T ++ A +G + E+H+YV++ G DS+L + N LI YS+C+ F M ++D++SW ++IAGY+Q + E LFR++ + D + + S+L A ++ E+H Sbjct: 283 NSYTIVSALTACDGFSYAKL------------GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH---KSDEVSMTSIIAA-SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR-MEIDEMILGSILRASSVLKSMLIVKEIH 510 HSP 4 Score: 86.2705 bits (212), Expect = 2.415e-16 Identity = 49/201 (24.38%), Postives = 105/201 (52.24%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 K++H ++ + D + ++L++ Y K ++ A VF+ I K + S+ +M+ + +++ ++ + LF + + L D+ + C+L A L ++ +E+H Y+LR G + ++ Y+ C D+ SA+A+FD + + ++ + SMI Y G + LF +M + V PD ++ +++L+AC + Sbjct: 507 KEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVET---GLSADSVALLCILSAAASLSALNK-GREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV-SPDHISFLALLYACSHA 701
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49140 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.390e-26 Identity = 65/218 (29.82%), Postives = 122/218 (55.96%), Query Frame = 1 Query: 169 GRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSS 822 G+++ + D R R +H+R+I + ++ L KL+ Y+ + AR VFD+I +++ N M+ +Y + Y + +++F ++ +++PD++T CVLKA + +++H + GL S+LF+ NGL++ Y +C ++ AR + D MS RD+VSWNS++ GY+Q +++ + REM S + D T+ S+L A ++ Sbjct: 46 GQVLDTYPDIRTLRT---VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGC---NVRPDHYTFPCVLKACS-CSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM-ESVKISHDAGTMASLLPAVSNTT 255 HSP 2 Score: 90.1225 bits (222), Expect = 1.672e-17 Identity = 54/173 (31.21%), Postives = 94/173 (54.34%), Query Frame = 1 Query: 301 SNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 + +++ + +F K+ KS+ S+N M+ Y + M + + L+S + + +PD +IT VL A G K++H Y+ R L +L L N LI Y++C + AR +F+ M +RD+VSW +MI+ Y G + ALF ++ +S ++ PD + V+ L AC + Sbjct: 256 TENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD---GFEPDAVSITSVLPAC-GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLV-PDSIAFVTTLAACSHA 423
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.390e-26 Identity = 61/176 (34.66%), Postives = 102/176 (57.95%), Query Frame = 1 Query: 322 RHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 R VF+ + K + SYN ++ Y+ MY D LR+ + ++ DLKPD+FT++ VL + + D KE+H YV+R G+DS +++ + L+ Y++ + + +F + RD +SWNS++AGY Q G Y E LFR+M+ + V +P V SV+ AC + + G ++H Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTT---DLKPDSFTLSSVLPIFSE-YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV-KPGAVAFSSVIPACAHLATLHLGKQLH 366 HSP 2 Score: 115.161 bits (287), Expect = 4.854e-25 Identity = 64/208 (30.77%), Postives = 114/208 (54.81%), Query Frame = 1 Query: 187 FTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHAC 810 F++Y + K++H +I + D ++ S L++ Y+KS + + VF ++ + S+N+++ Y + Y + LRLF + ++ +KP + V+ A L K++H YVLR G S++F+ + L+ YS+C ++ +AR +FD M+ D VSW ++I G++ G E +LF EM V +P+ V V+VL AC Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTA---KVKPGAVAFSSVIPACAHL-ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV-KPNQVAFVAVLTAC 454
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP370_ARATH (Putative pentatricopeptide repeat-containing protein At5g08490 OS=Arabidopsis thaliana GN=PCMP-E32 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.489e-26 Identity = 65/215 (30.23%), Postives = 117/215 (54.42%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLI-QARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRD--SRFAKEVHSYVL-RCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 K +H+ +I + D + + L++ Y+K + A FD I K + S+NA++ +S ++M D R F + + +P+ TI VL + ++ R +++HSYV+ R L + +F+ N L++FY R + A +LF M ++D+VSWN +IAGY+ + + LF +++ + PD VT++S+L C Q +D+ G E+H Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLK---EPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIH 353 HSP 2 Score: 95.5153 bits (236), Expect = 3.980e-19 Identity = 63/216 (29.17%), Postives = 112/216 (51.85%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDN-FLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCG-LDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 R +Q+H+ ++ S + F+ + L++FY + + +A +F ++ SK + S+N ++ Y+ + + +LF +L + D+ PD+ TI +L L D KE+HSY+LR L + N LI+FY+R D ++A F MS +DI+SWN+++ ++ + L +LN + D VT++S+L C I EVH Sbjct: 244 RSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLV--HKGDVSPDSVTIISILPVCAQL-TDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITL-DSVTILSLLKFCINVQGIGKVKEVH 455 HSP 3 Score: 85.1149 bits (209), Expect = 5.379e-16 Identity = 51/182 (28.02%), Postives = 95/182 (52.20%), Query Frame = 1 Query: 268 LASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDV-ASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHAC 810 ++ ++N Y+K + + +F ++ S +N +L SV +T+R F ++ ++ + KP + T VL L DS K +HSY+++ GL+ + N L++ Y++ + A FDG++++D+VSWN++IAG+S+ + F ML P P+ T+ +VL C Sbjct: 58 VSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAM--HFADEPKPSSVTFAIVLPLCVRL-GDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPT-EPNYATIANVLPVC 234 HSP 4 Score: 82.4185 bits (202), Expect = 3.487e-15 Identity = 63/246 (25.61%), Postives = 117/246 (47.56%), Query Frame = 1 Query: 217 KQLHARLIFHS-VAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGL---DSSLFLVNGLITFYSRCDDVASARALFDGMS-NRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPV------------------------------LRPDGVTVVSVLHACGQSSDIVFGMEVH 849 K++H+ ++ HS + D + + LI+FY++ A F +++K I S+NA+L A++ L L L + + + D+ TI +LK + + KEVH Y ++ GL + L N L+ Y++C +V A +F G+S R +VS+NS+++GY G +++ + LF EM + + +RP+ VT++++L C Q + + + H Sbjct: 350 KEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLN---EAITLDSVTILSLLKFCINVQGIGK-VKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCH 591 HSP 5 Score: 69.707 bits (169), Expect = 2.339e-11 Identity = 49/210 (23.33%), Postives = 106/210 (50.48%), Query Frame = 1 Query: 226 HARLIFHSVAPDNFLAS--KLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +A IF ++ L S L++ Y S S A+ +F ++++ + +++ M+ Y+ + + +F + + + ++P+ TI +L L ++ H Y++R GL + L L+ Y++C + A ++F + RD+V + +M+AGY+ G +E ++ M S + +PD V + ++L AC + I G++++ Sbjct: 488 YAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQA---RGMRPNTVTIMNLLPVCAQL-ASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNI-KPDHVFITTMLTACCHAGLIQDGLQIY 691
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.489e-26 Identity = 69/214 (32.24%), Postives = 115/214 (53.74%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKS-IFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 Q Q+H+ +I D + + L+ Y+ + L ++F+ + + S+N +L A H+ + LRLF + S + +PD+ T+ +L+ + + +VH Y L+ GL F+ NGLI Y++C + AR +FD M NRD+VSW+++I GY+Q GF EE LF+EM S + P+ VT V VL AC + G++++ Sbjct: 389 QGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVS---ECEPDHITMGNLLRGCVEI-SSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEM-KSAGIEPNHVTFVGVLTACSHVGLVEEGLKLY 597 HSP 2 Score: 112.849 bits (281), Expect = 2.409e-24 Identity = 67/228 (29.39%), Postives = 116/228 (50.88%), Query Frame = 1 Query: 166 YGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 Y LI + R Q +++H ++ + D L + +++ Y K SL AR VFD + +++ SY +++ YS + + +RL+ + +DL PD F ++KA D K++H+ V++ S L N LI Y R + ++ A +F G+ +D++SW+S+IAG+SQ GF E + +EML+ V P+ S L AC +G ++H Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ---EDLVPDQFAFGSIIKACASS-SDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 293 HSP 3 Score: 83.5741 bits (205), Expect = 1.565e-15 Identity = 59/229 (25.76%), Postives = 107/229 (46.72%), Query Frame = 1 Query: 163 AYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 A+G +I+ KQLHA++I + + LI Y + N + A VF I K + S+++++ +S + L + S P+ + LKA + L R + ++H ++ L + L Y+RC + SAR +FD + D SWN +IAG + G+ +E ++F +M +S + PD +++ S+L A + + GM++H Sbjct: 170 AFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV--FHPNEYIFGSSLKACSSLLRPD-YGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI-PDAISLRSLLCAQTKPMALSQGMQIH 394
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP227_ARATH (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.780e-26 Identity = 65/198 (32.83%), Postives = 109/198 (55.05%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHAC 810 KQ+H ++ + F+ S L++ Y+K+ + +AR +F+ + + + S A++ Y+ + + L +F L +S+ + P+ T +L AL+GL K+ H +VLR L L N LI YS+C +++ AR LFD M R +SWN+M+ GYS+ G E LFR M + ++PD VT+++VL C Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL---HSEGMSPNYVTYASLLTALSGLALLDH-GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGC 366 HSP 2 Score: 112.849 bits (281), Expect = 2.409e-24 Identity = 76/253 (30.04%), Postives = 132/253 (52.17%), Query Frame = 1 Query: 118 NSGQIQRALQTL-----DCGAYG--RLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDS--RFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 ++G++Q AL + + G +G L+ D R R +++HA +I P +L ++L+ FY K + L AR V D++ K++ S+ AM+ YS ++ L +F+ + S D KP+ FT V LT R S K++H +++ DS +F+ + L+ Y++ + AR +F+ + RD+VS ++IAGY+Q G EE +F L+S + P+ VT S+L A + + G + H Sbjct: 32 SNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRS---DGKPNEFTFATV---LTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR-LHSEGMSPNYVTYASLLTALSGLALLDHGKQAH 277
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.780e-26 Identity = 62/241 (25.73%), Postives = 122/241 (50.62%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPV------------------------------LRPDGVTVVSVLHACGQSSDIVFGMEVH 849 K+++A +I H ++ +F+ +K+++F K + A +F+++++ ++F YN+++ AY+ + +Y D +R++ L + PD FT + K+ L K+VH ++ + G + N LI Y + DD+ A +FD M RD++SWNS+++GY++ G ++ K LF ML+ + + PD ++++SVL +C Q + G +H Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFE--LPDRFTFPFMFKSCASL-GSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 264 HSP 2 Score: 87.8113 bits (216), Expect = 8.299e-17 Identity = 63/231 (27.27%), Postives = 105/231 (45.45%), Query Frame = 1 Query: 217 KQLHARLI-----FHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYS-----------VHDMYTDTLRLFSSLASSYS-----------------QDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHAC 810 KQ+H L FH V + LI+ Y K + L+ A VFD++ + + S+N++L Y+ H M T+ ++++ S Y+ ++PD ++ VL + L K +H Y R G + N LI YS+C ++ A LF M +D++SW++MI+GY+ G F EM + V +P+G+T + +L AC Sbjct: 129 KQVHGHLCKFGPRFHVVTEN-----ALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQL-GSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKV-KPNGITFLGLLSAC 352
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.668e-25 Identity = 72/248 (29.03%), Postives = 129/248 (52.02%), Query Frame = 1 Query: 109 LRANSGQIQRALQTLDCGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSS-LASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 LR +S ++ + D Y L++ T ++L Q + +HA ++ D + + L+N Y+K SL +AR VF+K+ + ++ ++ YS HD D L F+ L YS P+ FT++ V+KA R ++H + ++CG DS++ + + L+ Y+R + A+ +FD + +R+ VSWN++IAG+++ E+ LF+ ML RP + S+ AC + + G VH Sbjct: 44 LRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS----PNEFTLSSVIKA-AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG-FRPSHFSYASLFGACSSTGFLEQGKWVH 285 HSP 2 Score: 92.4337 bits (228), Expect = 3.369e-18 Identity = 57/202 (28.22%), Postives = 102/202 (50.50%), Query Frame = 1 Query: 220 QLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKAL--TGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 QLH + + + S L++ Y++ + A+ VFD + S++ S+NA++ ++ L LF + +P +F+ + A TG ++ VH+Y+++ G F N L+ Y++ + AR +FD ++ RD+VSWNS++ Y+Q GF +E F EM + RP+ ++ +SVL AC S Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD---GFRPSHFSYASLFGACSSTGFLEQGKW---VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI-RPNEISFLSVLTACSHS 376
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP319_ARATH (Pentatricopeptide repeat-containing protein At4g18520 OS=Arabidopsis thaliana GN=PCMP-A2 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.846e-25 Identity = 65/211 (30.81%), Postives = 119/211 (56.40%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +Q+H ++ V + + S L+ FY++ L A FD + K + S+ A++ A S + +F + + + P+ FT+ +LKA + + RF ++VHS V++ + + +F+ L+ Y++C +++ R +FDGMSNR+ V+W S+IA +++ GF EE +LFR M ++ + +TVVS+L ACG ++ G E+H Sbjct: 204 RQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHW---FLPNEFTVCSILKACSEE-KALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI-ANNLTVVSILRACGSVGALLLGKELH 408 HSP 2 Score: 95.5153 bits (236), Expect = 3.980e-19 Identity = 51/214 (23.83%), Postives = 110/214 (51.40%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 R +Q+H+ ++ + D F+ + L++ Y+K + R VFD +++++ ++ +++ A++ + + LF + + L +N T+ +L+A G KE+H+ +++ ++ ++++ + L+ Y +C + A + + +RD+VSW +MI+G S G E +EM+ V P+ T S L AC S ++ G +H Sbjct: 301 RFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRH---LIANNLTVVSILRA-CGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGV-EPNPFTYSSALKACANSESLLIGRSIH 509 HSP 3 Score: 86.2705 bits (212), Expect = 2.415e-16 Identity = 57/219 (26.03%), Postives = 103/219 (47.03%), Query Frame = 1 Query: 157 CGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACG 813 CG+ G L+ K+LHA++I +S+ + ++ S L+ Y K A +V ++ S+ + S+ AM+ S ++ L + + ++P+ FT + LKA + +HS + S++F+ + LI Y++C V+ A +FD M +++VSW +MI GY++ GF E L M + D ++L CG Sbjct: 395 CGSVGALLL----------GKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQ---EGVEPNPFTYSSALKACANS-ESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRM-EAEGFEVDDYIFATILSTCG 598
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 6.339e-25 Identity = 72/214 (33.64%), Postives = 112/214 (52.34%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 + AK LHARL+ + +++KL+N Y ++ ARH FD I ++ ++++N M+ Y ++ +R FS S L PD T VLKA + ++ +H L+ G +++ LI YSR V +AR LFD M RD+ SWN+MI+GY Q G +E L++ + D VTVVS+L AC ++ D G+ +H Sbjct: 68 QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM--LSSGLTPDYRTFPSVLKACRTVIDGNK----IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIH 270 HSP 2 Score: 107.071 bits (266), Expect = 1.322e-22 Identity = 67/241 (27.80%), Postives = 125/241 (51.87%), Query Frame = 1 Query: 130 IQRALQTLDCGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCG-LDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 + L+ +D L+ T+ + +H+ I H + + F+++KLI+ Y++ L + VFD++ + + S+N+++ AY +++ + LF + S Q PD T+ + L+ L D R + V + LR G + + N ++ Y++ V SARA+F+ + N D++SWN++I+GY+Q GF E ++ M + + T VSVL AC Q+ + GM++H Sbjct: 238 LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ---PDCLTLISLASILSQL-GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474 HSP 3 Score: 73.559 bits (179), Expect = 1.620e-12 Identity = 49/189 (25.93%), Postives = 96/189 (50.79%), Query Frame = 1 Query: 259 DNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALT--GLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 D + + ++ Y+K + AR VF+ + + + S+N ++ Y+ + ++ + +++ + ++ + T VL A + G R ++H +L+ GL +F+V L Y +C + A +LF + + V WN++IA + G E+ LF+EML+ V +PD +T V++L AC S Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEE--GEIAANQGTWVSVLPACSQAGALRQGM---KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV-KPDHITFVTLLSACSHS 565 The following BLAST results are available for this feature:
BLAST of FC918250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >FC918250 ID=FC918250; Name=FC918250; organism=Citrus clementina; type=EST; length=849bpback to top |