FC918250
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP192_ARATH (Pentatricopeptide repeat-containing protein At2g37320 OS=Arabidopsis thaliana GN=PCMP-E50 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.339e-25 Identity = 66/201 (32.84%), Postives = 103/201 (51.24%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHAC 810 R H + D +L S L+ Y S + A VF+++ +++ S+ AM+ ++ L+L+S + S S P+++T T +L A TG + + VH L GL S L + N LI+ Y +C D+ A +FD SN+D+VSWNSMIAGY+Q G + LF M+ +PD +T + VL +C Sbjct: 137 RTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD---PNDYTFTALLSACTGSGALGQ-GRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP182_ARATH (Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana GN=PCMP-H6 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.339e-25 Identity = 66/225 (29.33%), Postives = 113/225 (50.22%), Query Frame = 1 Query: 175 LIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +I+ D R K +H + D ++ + L+ FYSK + AR VFD++ KSI ++N+++ + + + + +++F + S +PD+ T +L A S VH Y++ GLD ++ L LI YSRC DV AR +FD M ++ +W +MI+ Y G+ ++ LF +M + P+ VT V+VL AC + + G V+ Sbjct: 113 VIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRES---GFEPDSATFVSLLSACAQTGAVS-LGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVY 333 HSP 2 Score: 108.612 bits (270), Expect = 4.543e-23 Identity = 67/218 (30.73%), Postives = 107/218 (49.08%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSY----SQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +Q +Q+HA LI L +KLI + ++ +F + F +N+++ + T LRL + Y S ++ P N+T T V+K+ L R K VH + + G ++ L+TFYS+C D+ AR +FD M + IV+WNS+++G+ Q G +E +F +M S PD T VS+L AC Q+ + G VH Sbjct: 23 KQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKS-------TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADL-SALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESG-FEPDSATFVSLLSACAQTGAVSLGSWVH 231
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.280e-25 Identity = 64/200 (32.00%), Postives = 113/200 (56.50%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHAC 810 + K++HA L + ++ + L++ Y++ + A +VF + +++ S++AM+ Y+ + + LR F + ++D P++ T+ VL+A L + K +H Y+LR GLDS L +++ L+T Y RC + + +FD M +RD+VSWNS+I+ Y G+ ++ +F EML + P VT VSVL AC Sbjct: 200 KGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE-TKDSSPNSVTMVSVLQACASLAALEQ-GKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGA-SPTPVTFVSVLGAC 396 HSP 2 Score: 107.457 bits (267), Expect = 1.012e-22 Identity = 71/216 (32.87%), Postives = 114/216 (52.78%), Query Frame = 1 Query: 214 AKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTG---LFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREML-NSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 A ++H ++ + D FLA+KLI YS S+ AR VFDK ++I+ +NA+ A ++ + L L+ + ++ D FT T VLKA KE+H+++ R G S ++++ L+ Y+R V A +F GM R++VSW++MIA Y++ G E FREM+ + P+ VT+VSVL AC + + G +H Sbjct: 96 ALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRI---GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIH 308
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP146_ARATH (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.412e-24 Identity = 69/229 (30.13%), Postives = 114/229 (49.78%), Query Frame = 1 Query: 166 YGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGL-DSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 YG LI T Q K H L+ + + L + L++ Y K + AR VF++ + + + AM++ Y+ + + L LF + ++KP+ TI VL GL + + VH ++ G+ D+++ N L+ Y++C A+ +F+ S +DIV+WNS+I+G+SQ G E LF M NS + P+GVTV S+ AC + G +H Sbjct: 245 YGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV---EIKPNCVTIASVLSGC-GLIENLELGRSVHGLSIKVGIWDTNV--ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTPNGVTVASLFSACASLGSLAVGSSLH 466 HSP 2 Score: 103.219 bits (256), Expect = 1.909e-21 Identity = 61/228 (26.75%), Postives = 123/228 (53.95%), Query Frame = 1 Query: 166 YGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 + + ++ T+ + K++H +L+ + DN + + L++ Y+K + A VF+ IT +++ + +M+ Y +D+ + L LF+ + + ++ + +T ++ A T L + K H +++ G++ S LV L+ Y +C D+++AR +F+ S+ D+V W +MI GY+ G E +LF++M ++P+ VT+ SVL CG ++ G VH Sbjct: 145 FSKALKACTELQDLDNGKKIHCQLV-KVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMREN---NVLGNEYTYGTLIMACTKLSALHQ-GKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM-KGVEIKPNCVTIASVLSGCGLIENLELGRSVH 366 HSP 3 Score: 88.5817 bits (218), Expect = 4.865e-17 Identity = 53/189 (28.04%), Postives = 98/189 (51.85%), Query Frame = 1 Query: 259 DNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGL--DSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 D +A+ L++ Y+K A++VF+ + K I ++N+++ +S + + L LF + S + + P+ T+ + A L +H+Y ++ G SS+ + L+ FY++C D SAR +FD + ++ ++W++MI GY + G LF EML +P+ T S+L ACG + Sbjct: 376 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNS---ESVTPNGVTVASLFSACASL-GSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQ-QKPNESTFTSILSACGHT 559 HSP 4 Score: 82.0333 bits (201), Expect = 4.554e-15 Identity = 58/211 (27.49%), Postives = 104/211 (49.29%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +Q H L + + D +A+KL++ Y AR VFD+I + + ML Y ++ + ++L+ L + D+ + LKA T L +D K++H +++ ++ L GL+ Y++C ++ SA +F+ ++ R++V W SMIAGY + EE LF M + VL + T +++ AC + S + G H Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLL---MKHGFRYDDIVFSKALKACTEL-QDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNE-YTYGTLIMACTKLSALHQGKWFH 265
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PPR8_ARATH (Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.845e-24 Identity = 67/214 (31.31%), Postives = 111/214 (51.87%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 R + H +I H ++F++S L Y + + AR VFD++ + + A+L A+S +D+Y + L LF A + L PD T VL A G R + KE+H ++ G+ S++ + + L+ Y +C V AR +F+GMS ++ VSW++++ GY Q G +E+ +FREM D +VL AC + + G E+H Sbjct: 180 RLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLF--YAMHRGKGLVPDGSTFGTVLTAC-GNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK-----DLYCFGTVLKACAGLAAVRLGKEIH 385 HSP 2 Score: 105.145 bits (261), Expect = 5.023e-22 Identity = 59/222 (26.58%), Postives = 117/222 (52.70%), Query Frame = 1 Query: 154 DCGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 D +G ++ + R +Q K++H +LI + + + + S L++ Y K S+ +AR VF+ ++ K+ S++A+L Y + + + +F + D + VLKA GL R KE+H +R G ++ + + LI Y + + SA ++ MS R++++WN+M++ +Q G EE + F +M+ + +PD ++ +++L ACG + Sbjct: 264 DGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK-------DLYCFGTVLKACAGLAA-VRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGI-KPDYISFIAILTACGHT 476
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP405_ARATH (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.146e-24 Identity = 68/228 (29.82%), Postives = 111/228 (48.68%), Query Frame = 1 Query: 166 YGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 Y L+ HF + + K LH +I + L++ + Y+ + AR +F+++ S+ SYN ++ Y +Y D + +F + S + + PD +T V KA G + + VH +LR ++ N L+ Y V AR +FD M NRD++SWN+MI+GY + G+ + +F M+N V D T+VS+L CG D+ G VH Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVT-YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCV-PDGYTYPFVAKA-AGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESV-DLDHATIVSMLPVCGHLKDLEMGRNVH 241 HSP 2 Score: 97.8265 bits (242), Expect = 8.019e-20 Identity = 59/209 (28.23%), Postives = 103/209 (49.28%), Query Frame = 1 Query: 223 LHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +H R++ D ++ + L+ Y + AR VFD + ++ + S+N M+ Y + D L +F + + S DL D+ TI +L + G +D + VH V L + + N L+ Y +C + AR +FD M RD+++W MI GY++ G E L R ++ +RP+ VT+ S++ CG + + G +H Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNE-SVDL--DHATIVSMLP-VCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCR-LMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLH 342 HSP 3 Score: 91.2781 bits (225), Expect = 7.506e-18 Identity = 60/212 (28.30%), Postives = 104/212 (49.06%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGM----SNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGM 840 K LH + V D + + LI+ Y+K + VF + ++A++ +++ +D L LF + +D++P+ T+ +L A L D R A +H Y+ + G SSL GL+ YS+C + SA +F+G+ ++D+V W ++I+GY G +F EM+ S V P+ +T S L+AC S + G+ Sbjct: 339 KCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRR---EDVEPNIATLNSLLPAYAAL-ADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGV-TPNEITFTSALNACSHSGLVEEGL 545
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana GN=PCMP-E19 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.146e-24 Identity = 65/211 (30.81%), Postives = 113/211 (53.55%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +Q+H I + + L++ L+ YSK SL +A +FD ++ +++AM+ YS + + ++LFS + +S +KP +TI VL A + + K++HS++L+ G + LF L+ Y++ +A AR FD + RD+ W S+I+GY Q EE L+R M + ++ P+ T+ SVL AC + + G +VH Sbjct: 241 RQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM---FSAGIKPSEYTIVGVLNACSDICYLEE-GKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII-PNDPTMASVLKACSSLATLELGKQVH 446 HSP 2 Score: 97.8265 bits (242), Expect = 8.019e-20 Identity = 59/209 (28.23%), Postives = 106/209 (50.72%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFG 837 + KQLH+ L+ F + L++ Y+K+ L AR FD + + + + +++ Y + + L L+ + ++ + P++ T+ VLKA + L K+VH + ++ G + + + L T YS+C + +F N+D+VSWN+MI+G S G +E LF EML + + PD VT V+++ AC + G Sbjct: 340 EGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTA---GIIPNDPTMASVLKACSSL-ATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEML-AEGMEPDDVTFVNIISACSHKGFVERG 543 HSP 3 Score: 80.4925 bits (197), Expect = 1.325e-14 Identity = 50/225 (22.22%), Postives = 105/225 (46.67%), Query Frame = 1 Query: 178 IQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTV-VSVLHACGQSSDIVFGMEVH 849 + H + R + +H ++I + A+ L+NFY+K L +A +F+ I K + S+N+++ YS + + + + +QD+ P+ +T+ + KA + L + S ++ H+ V++ +++ L+ Y + V +F M R+ +W++M++GY+ G EE +F L D V +VL + + + G ++H Sbjct: 21 LTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL-QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIH 244 HSP 4 Score: 70.4774 bits (171), Expect = 1.371e-11 Identity = 44/142 (30.99%), Postives = 70/142 (49.30%), Query Frame = 1 Query: 439 SSYSQDLKPDNFTITCVLKALT--GLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEE---CKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 S++ +L P T+ LK LT R+ + VH ++R G + + N L+ FY++C +A A ++F+ + +D+VSWNS+I GYSQ G LFREM +L P+ T+ + A G + H Sbjct: 4 STFQTELNPHTSTL---LKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDIL-PNAYTLAGIFKAESSLQSSTVGRQAH 141
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980 OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.109e-24 Identity = 69/217 (31.80%), Postives = 119/217 (54.84%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKS---NSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 R+ Q+ A I + +F+A KLINF ++S +S+ ARH+F+ ++ I +N+M YS +T+ L +FS + PDN+T +LKA + + +++H ++ GLD ++++ LI Y+ C+DV SAR +FD + +V +N+MI GY++ E +LFREM L+P+ +T++SVL +C + G +H Sbjct: 43 RELMQIQAYAIKSHIEDVSFVA-KLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYS---RFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA-VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM-QGKYLKPNEITLLSVLSSCALLGSLDLGKWIH 253 HSP 2 Score: 92.8189 bits (229), Expect = 2.580e-18 Identity = 55/209 (26.32%), Postives = 102/209 (48.80%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFG 837 + +QLH + + + ++ LIN Y++ + AR VFD+I + YNAM+ Y+ + + L LF + Y LKP+ T+ VL + L K +H Y + + + LI +++C + A ++F+ M +D +W++MI Y+ G E+ +F E + S ++PD +T + +L+AC + + G Sbjct: 147 EGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKY---LKPNEITLLSVLSSCA-LLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMF-ERMRSENVQPDEITFLGLLNACSHTGRVEEG 350
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 5.367e-24 Identity = 68/204 (33.33%), Postives = 110/204 (53.92%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLR-CGLDSSLFLV--NGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNS-PVLRPDGVTVVSVLHAC 810 + KQ+H +++ H D ++ + LI+ Y L AR VFD++ +S+ S+N+M+ A Y L+LF + S+ +PD +T+ VL A GL S H+++LR C +D ++ ++ N LI Y +C + A +F GM RD+ SWN+MI G++ G EE F M++ +RP+ VT V +L AC Sbjct: 169 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSF----EPDGYTMQSVLSACAGLGSLS-LGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIAC 367 HSP 2 Score: 103.219 bits (256), Expect = 1.909e-21 Identity = 73/216 (33.80%), Postives = 100/216 (46.30%), Query Frame = 1 Query: 211 QAKQLHA---RLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 Q KQLHA R + FL K++ S + + A VFD I + S F +N ++ A + HD+ + PD T VLKA +F S K+VH +++ G +++ NGLI Y C + AR +FD M R +VSWNSMI + G Y+ LFREM S PDG T+ SVL AC + G H Sbjct: 63 QLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACA-HDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSE-GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS--FEPDGYTMQSVLSACAGLGSLSLGTWAH 274
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP267_ARATH (Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.154e-24 Identity = 65/207 (31.40%), Postives = 102/207 (49.28%), Query Frame = 1 Query: 220 QLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGM 840 Q+H ++ D+ L + L++ YS + A VFD+I + S+N + Y + D L LF + + +KPD T L+A L F K+VH ++ GL +L L N L++ YSRC + A +F GM R++VSW ++I+G + GF +E F EML + P+ T+ +L AC S + GM Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALD-FGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGI-SPEEQTLTGLLSACSHSGLVAEGM 338 HSP 2 Score: 77.7962 bits (190), Expect = 8.588e-14 Identity = 57/218 (26.15%), Postives = 101/218 (46.33%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKS---NSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKP--DNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSP--VLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +Q+HA L+ S+ ++ + ++ + S + + VF + + ++ N M+ A+S+ + RLF SL + S P +F + C +K+ D ++H + G S L+ L+ YS C++ A +FD + RD VSWN + + Y + + LF +M N ++PDGVT + L AC + FG +VH Sbjct: 28 RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS-----GDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVH 240 The following BLAST results are available for this feature:
BLAST of FC918250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >FC918250 ID=FC918250; Name=FC918250; organism=Citrus clementina; type=EST; length=849bpback to top |