FC918250
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP115_ARATH (Pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Arabidopsis thaliana GN=PCMP-A3 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.012e-22 Identity = 66/213 (30.99%), Postives = 110/213 (51.64%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAML--IAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 KQ+H + + + + FL +KL++ Y+ S+ A+ VFD+ TS +++S+NA+L S Y D L F+ + DL ++++ V K+ G R + H+ ++ GL +S+FL L+ Y +C V AR +FD + RDIV W +MIAG + E LFR M++ + P+ V + ++L G + G EVH Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRE-LGVDLNV--YSLSNVFKSFAGASA-LRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVH 339 HSP 2 Score: 103.99 bits (258), Expect = 1.119e-21 Identity = 64/215 (29.77%), Postives = 111/215 (51.63%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRC-GLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 RQ + HA I + + FL + L++ Y K + AR VFD+I + I + AM+ + + + L LF ++ S + + P++ +T +L L G + + KEVH++VL+ F+ +GLI Y +C D+AS R +F G R+ +SW ++++GY+ G +++ + RPD VT+ +VL C + I G E+H Sbjct: 231 RQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISE--EKIYPNSVILTTILPVL-GDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSI-VWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIH 441 HSP 3 Score: 84.7297 bits (208), Expect = 7.025e-16 Identity = 62/220 (28.18%), Postives = 100/220 (45.45%), Query Frame = 1 Query: 193 DYRLPRQAKQLHARLI-FHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 D + + K++HA ++ + F+ S LI+ Y K + R VF ++ S+ A++ Y+ + + LR S+ + +PD TI VL L R + KE+H Y L+ ++ LV L+ YS+C LFD + R++ +W +MI Y + +FR ML S RPD VT+ VL C + G E+H Sbjct: 328 DVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALR---SIVWMQQEGFRPDVVTIATVLPVCAEL-RAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH-RPDSVTMGRVLTVCSDLKALKLGKELH 542 HSP 4 Score: 73.559 bits (179), Expect = 1.620e-12 Identity = 52/215 (24.19%), Postives = 101/215 (46.98%), Query Frame = 1 Query: 193 DYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLN------SPVLRPDGVTVVSVLHACGQS 819 + R +Q K++H + + P+ L + L+ YSK +FD++ +++ ++ AM+ Y + + +F + S +PD+ T+ VL + L + + KE+H ++L+ +S F+ +I Y +C D+ SA FD ++ + ++W ++I Y C LFR+ +N S P+ T +VL C Q+ Sbjct: 430 ELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH---RPDSVTMGRVLTVCSDL-KALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYG-------CNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQA 633
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP436_ARATH (Pentatricopeptide repeat-containing protein At5g59600 OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.322e-22 Identity = 67/219 (30.59%), Postives = 115/219 (52.51%), Query Frame = 1 Query: 130 IQRALQTLDCGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVT 786 + + + L G+Y LI+ RL + + LHA L+ +A +A+KL+ FY + ++ AR VFD++ + I M+ A + + Y ++L F + Y LK D F + +LKA L D F K +H VL+ +S F+V+ LI YS+ +V +AR +F + +D+V +N+MI+GY+ +E L ++M ++PD +T Sbjct: 7 VPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREM---YKDGLKLDAFIVPSLLKASRNLL-DREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM-KLLGIKPDVIT 220
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.322e-22 Identity = 73/271 (26.94%), Postives = 119/271 (43.91%), Query Frame = 1 Query: 214 AKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYS----------------------------QDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSW-------------------------------NSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 A+ +H R+I + +L + L+N YSK+ + AR +FD++ ++ FS+N +L AYS T F L S + ++P FT+T VL ++ R K+VHS++++ GL ++ + N L+ Y++C D A+ +FD M RDI SW NSMI+G++Q G+ +F +ML +L PD T+ SVL AC + G ++H Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAAT-RCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302 HSP 2 Score: 96.2857 bits (238), Expect = 2.333e-19 Identity = 57/178 (32.02%), Postives = 93/178 (52.25%), Query Frame = 1 Query: 280 LINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMS-NRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHAC 810 L++ Y K + QA+++F + + + ++ AM++ Y H Y + + LF S+ +P+++T+ +L + L S K++H ++ G S+ + N LIT Y++ ++ SA FD + RD VSW SMI +Q G EE LF ML LRPD +T V V AC Sbjct: 353 LLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ---RPNSYTLAAMLSVASSLASLSH-GKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG-LRPDHITYVGVFSAC 525 HSP 3 Score: 95.5153 bits (236), Expect = 3.980e-19 Identity = 71/279 (25.45%), Postives = 121/279 (43.37%), Query Frame = 1 Query: 199 RLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAY-----------SVHDMYTDTLRLFSSLASSYSQD------------------LKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASAR-----------------ALFDG----------------MSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 R K++H+ ++ + + +++ L+N Y+K + A+ VFD++ + I S+NAM+ + M + ++S+ S ++Q L PD FT+ VL A L K++HS+++ G D S ++N LI+ YSRC V +AR AL DG + +RD+V+W +MI GY Q G Y E LFR M+ RP+ T+ ++L + + G ++H Sbjct: 160 RCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANL-EKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG-QRPNSYTLAAMLSVASSLASLSHGKQIH 436
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP333_ARATH (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.726e-22 Identity = 63/232 (27.16%), Postives = 115/232 (49.57%), Query Frame = 1 Query: 154 DCGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 D + L+ + + KQ+H ++ HS++ D FL S LI+ Y K + A+++F + S + + AM+ Y + +Y D+L +F L + P+ T+ +L + G+ + +E+H ++++ G D+ + +I Y++C + A +F+ +S RDIVSWNSMI +Q +FR+M S + D V++ + L AC FG +H Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKV---KISPNEITLVSILPVI-GILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY-DCVSISAALSACANLPSESFGKAIH 565 HSP 2 Score: 93.9745 bits (232), Expect = 1.158e-18 Identity = 54/210 (25.71%), Postives = 107/210 (50.95%), Query Frame = 1 Query: 220 QLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 QLH ++ V + + + L++ YSK A +F ++ ++N M+ Y + ++L F + SS + PD T + +L +++ F + + K++H Y++R + +FL + LI Y +C V+ A+ +F ++ D+V + +MI+GY G Y + +FR ++ + P+ +T+VS+L G + G E+H Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS---GVLPDAITFSSLLPSVSK-FENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI-SPNEITLVSILPVIGILLALKLGRELH 464 HSP 3 Score: 92.4337 bits (228), Expect = 3.369e-18 Identity = 60/198 (30.30%), Postives = 95/198 (47.98%), Query Frame = 1 Query: 259 DNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTG-LFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 + F+AS LI Y + + +FD++ K +N ML Y+ ++ FS + + P+ T CVL L D ++H V+ G+D + N L++ YS+C A LF MS D V+WN MI+GY Q G EE F EM++S VL PD +T S+L + + ++ + ++H Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD---QISPNAVTFDCVLSVCASKLLID--LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL-PDAITFSSLLPSVSKFENLEYCKQIH 363 HSP 4 Score: 91.6633 bits (226), Expect = 5.747e-18 Identity = 53/208 (25.48%), Postives = 107/208 (51.44%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGM 840 ++LH +I + +I+ Y+K + A +F++++ + I S+N+M+ + D + + +F + S + D +I+ L A L +S F K +H ++++ L S ++ + LI Y++C ++ +A +F M ++IVSWNS+IA G ++ LF EM+ +RPD +T + ++ +C D+ G+ Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS---GICYDCVSISAALSACANLPSES-FGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGV 664 HSP 5 Score: 77.411 bits (189), Expect = 1.122e-13 Identity = 57/229 (24.89%), Postives = 108/229 (47.16%), Query Frame = 1 Query: 175 LIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSK--SIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGL--FRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 L+Q ++ L RQ KQ+HA LI +S++ D++ +++ Y+ S +F ++ + SI +N+++ ++ + + L + + + PD T C++KA L F+ F + S + G+D + F+ + LI Y + LFD + +D V WN M+ GY++ G + F ++ + P+ VT VL C I G+++H Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCF---GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSL---GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF-SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLH 262
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP111_ARATH (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.726e-22 Identity = 69/207 (33.33%), Postives = 112/207 (54.11%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFG 837 KQ+H +I V+ D F+ + LI+ YSKS S+ A VF++I +S+ ++N+ML +S + + + LF + SY L+ + T V++A + + + K VH ++ GL LF LI Y++C D+ +A +F MS+R IVSW+SMI Y G + F +M+ S +P+ V ++VL ACG S + G Sbjct: 425 KQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSY---LEMNEVTFLAVIQACSSIGSLEK-GKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGT-KPNEVVFMNVLSACGHSGSVEEG 624 HSP 2 Score: 102.834 bits (255), Expect = 2.493e-21 Identity = 63/217 (29.03%), Postives = 112/217 (51.61%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKA--LTGLFRDSRFAKEVHSYVLRCGLDSSL-FLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 R A+ +H ++ D L + L+ YSK L+ + +F+KI K+ S+ AM+ +Y+ + LR FS + S ++P+ T+ VL + L GL R+ K VH + +R LD + L L+ Y+ C ++ + +S+R+IV+WNS+I+ Y+ G + LFR+M+ + +PD T+ S + AC + + G ++H Sbjct: 219 RIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKS---GIEPNLVTLYSVLSSCGLIGLIRE---GKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRI-KPDAFTLASSISACENAGLVPLGKQIH 428 HSP 3 Score: 100.138 bits (248), Expect = 1.616e-20 Identity = 61/210 (29.05%), Postives = 109/210 (51.90%), Query Frame = 1 Query: 220 QLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 ++H R+I V D + + L+ Y ++ +L A VFD + + + +++ ++ + + LR+F + ++PD T+ V++ L R A+ VH + R D L N L+T YS+C D+ S+ +F+ ++ ++ VSW +MI+ Y++G F E+ F EM+ S + P+ VT+ SVL +CG I G VH Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDD---GVEPDAVTMISVVEGCAEL-GCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI-EPNLVTLYSVLSSCGLIGLIREGKSVH 326 HSP 4 Score: 96.6709 bits (239), Expect = 1.787e-19 Identity = 65/219 (29.68%), Postives = 111/219 (50.68%), Query Frame = 1 Query: 202 LPRQAKQLHARLIFHSVAPD-NFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKAL--TGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 L R+ K +H + + P+ L+ L+ Y++ L V ++ ++I ++N+++ Y+ M L LF + + Q +KPD FT+ + A GL K++H +V+R + S F+ N LI YS+ V SA +F+ + +R +V+WNSM+ G+SQ G E +LF M +S L + VT ++V+ AC + G VH Sbjct: 318 LIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVT---QRIKPDAFTLASSISACENAGLVP---LGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHS-YLEMNEVTFLAVIQACSSIGSLEKGKWVH 528 HSP 5 Score: 81.6481 bits (200), Expect = 5.947e-15 Identity = 55/215 (25.58%), Postives = 98/215 (45.58%), Query Frame = 1 Query: 208 RQAKQLHARLIFHS-VAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 R QLHA L+ + D +KLI Y+ S +R VF+ F Y ++ + + L+ L S +Q K F VL+A G +VH +++ G+D + L+ Y + +++ A +FDGM RD+V+W+++++ + G + +F+ M++ V PD VT++SV+ C + + VH Sbjct: 15 RLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISK---FVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGV-EPDAVTMISVVEGCAELGCLRIARSVH 225
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP108_ARATH (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.255e-22 Identity = 63/206 (30.58%), Postives = 111/206 (53.88%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKA---LTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 + KQ+HA +I + ++ S LI+ Y K L A+ VFD++ K++ S+ AM++ Y + +++F + S + PD++T+ + A ++ L S+F H + GL + + N L+T Y +C D+ + LF+ M+ RD VSW +M++ Y+Q G E LF +M+ L+PDGVT+ V+ AC ++ Sbjct: 288 EGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS---GIDPDHYTLGQAISACANVSSLEEGSQF----HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG-LKPDGVTLTGVISACSRA 485 HSP 2 Score: 84.7297 bits (208), Expect = 7.025e-16 Identity = 58/238 (24.37%), Postives = 101/238 (42.44%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYS---------------------------QDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 KQ+H ++I + S L+ Y+ + A+ VF + ++ YN+++ M D L+LF + Q LK D + VL A GL + K++H+ ++R +++ + LI Y +C + A+ +FD M +++VSW +M+ GY Q G EE +F +M S + PD T+ + AC S + G + H Sbjct: 159 KQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINE-GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGI-DPDHYTLGQAISACANVSSLEEGSQFH 394 HSP 3 Score: 78.5666 bits (192), Expect = 5.035e-14 Identity = 65/272 (23.90%), Postives = 113/272 (41.54%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLAS--SYSQDLKPDNFTIT----CVLKALTGLFRDSR----------------------FAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNR------------------------------DIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 R K +H +I P+ FL + +++ Y+ S AR VFD+I ++FS+N +L+AYS + ++ F L + ++ + ++++ +KA + RD K++H V++ G +S L + + L+ Y+ ++ A+ +F G+ +R D VSW +MI G +Q G +E FREM L+ D SVL ACG I G ++H Sbjct: 23 RYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM-KVQGLKMDQYPFGSVLPACGGLGAINEGKQIH 293
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP321_ARATH (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN=PCMP-E101 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.945e-22 Identity = 69/241 (28.63%), Postives = 123/241 (51.04%), Query Frame = 1 Query: 106 NLRANSGQIQRALQTLD------CGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHAC 810 N+ SG + A + LD ++ L+ + + L +A+ L + +V NF+ I+ Y+ + + +A+ VFD + + + S+NAM+ AY+ Y + L +F+ + ++ KPD FT+ VL A L S+ + VH Y+ + G++ FL L+ YS+C + A +F S RD+ +WNS+I+ S G ++ +F EM+ +P+G+T + VL AC Sbjct: 183 NVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFM----ISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTE--KPDGFTLVSVLSACASLGSLSQ-GEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEG-FKPNGITFIGVLSAC 415 HSP 2 Score: 86.2705 bits (212), Expect = 2.415e-16 Identity = 57/213 (26.76%), Postives = 91/213 (42.72%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 + +Q+H I + D F+ + L+N Y +S AR V D++ + S+N++L AY + + LF + + V S+ N +I+ Y+ V A+ +FD M RD+VSWN+M+ Y+ G Y E +F +ML+ +PDG T+VSVL AC + G VH Sbjct: 158 EGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEE------------------------------RNVESW-------------NFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVH 327 HSP 3 Score: 85.5001 bits (210), Expect = 4.119e-16 Identity = 54/183 (29.51%), Postives = 95/183 (51.91%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKS---NSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREM 750 + +Q HA ++ + D F ASKL+ F + + ++ A + ++I S + F++N+++ AY+ L +F + + PD ++ T VLKA F +++H ++ GL + +F+ N L+ Y R AR + D M RD VSWNS+++ Y + G +E +ALF EM Sbjct: 54 EIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLG---PVFPDKYSFTFVLKACAA-FCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEM 232
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP364_ARATH (Pentatricopeptide repeat-containing protein At5g04780 OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 3.846e-22 Identity = 65/213 (30.52%), Postives = 115/213 (53.99%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +AK H ++I + D L + LIN YSK + AR VFD + +S+ S+N M+ Y+ + M ++ L +F + + + K FTI+ VL A G+ D+ K++H ++ +D +L++ L+ Y++C + A +F+ M ++ V+W+SM+AGY Q YEE L+R L + T+ SV+ AC + ++ G ++H Sbjct: 79 EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRN---EGFKFSEFTISSVLSAC-GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMS-LEQNQFTLSSVICACSNLAALIEGKQMH 286 HSP 2 Score: 81.2629 bits (199), Expect = 7.767e-15 Identity = 45/203 (22.17%), Postives = 105/203 (51.72%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 + K+LH + + + ++ + L++ Y+K + A VF+ + KS ++++M+ Y + Y + L L+ + L+ + FT++ V+ A + L K++H+ + + G S++F+ + + Y++C + + +F + +++ WN++I+G+++ +E LF E + + P+ VT S+L CG + Sbjct: 180 ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR---AQRMSLEQNQFTLSSVICACSNLAALIE-GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILF-EKMQQDGMHPNEVTFSSLLSVCGHT 377
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP184_ARATH (Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana GN=PCMP-E23 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 5.023e-22 Identity = 68/209 (32.54%), Postives = 104/209 (49.76%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFG 837 Q +Q+ A+++ HSV NFL K + + S +F + +S+N M+ + + + D S LKPD FT V A L + + VHS + + GL+ + + + LI Y++C V AR LFD ++ RD VSWNSMI+GYS+ G+ ++ LFR+M PD T+VS+L AC D+ G Sbjct: 52 QLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSF----LFSVTEEPNHYSFNYMIRGLT--NTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKL-EEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKM-EEEGFEPDERTLVSMLGACSHLGDLRTG 252 HSP 2 Score: 99.7525 bits (247), Expect = 2.110e-20 Identity = 66/210 (31.43%), Postives = 105/210 (50.00%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 + +H+ L + D + LI Y+K + AR +FD+IT + S+N+M+ YS D + LF + + +PD T+ +L A + L D R + + + + S FL + LI+ Y +C D+ SAR +F+ M +D V+W +MI YSQ G E LF EM + V PD T+ +VL ACG + G ++ Sbjct: 152 RSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEE---EGFEPDERTLVSMLGACSHL-GDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV-SPDAGTLSTVLSACGSVGALELGKQI 356 HSP 3 Score: 93.5893 bits (231), Expect = 1.512e-18 Identity = 56/201 (27.86%), Postives = 95/201 (47.26%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHAC 810 R + L I + FL SKLI+ Y K L AR VF+++ K ++ AM+ YS + ++ +LF + + + PD T++ VL A G K++ ++ L ++++ GL+ Y +C V A +F+ M ++ +WN+MI Y+ G +E LF M + P +T + VL AC Sbjct: 250 RTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKT---GVSPDAGTLSTVLSAC-GSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM----SVPPSDITFIGVLSAC 442
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP337_ARATH (Pentatricopeptide repeat-containing protein At4g25270, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E53 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.560e-22 Identity = 57/180 (31.67%), Postives = 100/180 (55.56%), Query Frame = 1 Query: 268 LASKLINFYSKSNSLIQARHVFDKITSK--SIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVL 801 ++SKL+ Y+ A VFD+++ + S F++N+++ Y+ Y D + L+ +A +KPD FT VLKA G+ + + +H +++ G ++++N L+ Y++C D+ AR +FD + ++D VSWNSM+ GY G E +FR M+ + + PD V + SVL Sbjct: 129 ISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAED---GVKPDRFTFPRVLKACGGI-GSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGI-EPDKVAISSVL 303 HSP 2 Score: 102.449 bits (254), Expect = 3.256e-21 Identity = 59/205 (28.78%), Postives = 105/205 (51.22%), Query Frame = 1 Query: 223 LHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFG 837 +H L+ D ++ + L+ Y+K +++AR+VFD I K S+N+ML Y H + + L +F + + ++PD I+ VL + + +++H +V+R G++ L + N LI YS+ + A +FD M RD VSWN++I+ +S+ + E ++ +PDG+T VSVL C + + G Sbjct: 217 IHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQN---GIEPDKVAISSVLARVLSF----KHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSK----NSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDG 410 The following BLAST results are available for this feature:
BLAST of FC918250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC918250 ID=FC918250; Name=FC918250; organism=Citrus clementina; type=EST; length=849bpback to top |