FC918250
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP303_ARATH (Pentatricopeptide repeat-containing protein At4g04370 OS=Arabidopsis thaliana GN=PCMP-E99 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.560e-22 Identity = 63/210 (30.00%), Postives = 111/210 (52.86%), Query Frame = 1 Query: 223 LHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGY-SQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +H +++ + + D +++S L+N Y+K L AR VF+++ + + + AM+ YS + + L + + Q +KP T+ L+ L+G+ ++ + +H + + G D + ++N ++ Y +CD V A+ LFD M RD+VSWN+MI+GY S G E K L+R + LRPD T + L G D+ G +H Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRF---QGIKPGPVTL---LEMLSGVLEITQL-QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYR--MRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLH 268 HSP 2 Score: 92.4337 bits (228), Expect = 3.369e-18 Identity = 65/213 (30.52%), Postives = 98/213 (46.01%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKA--LFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 + LH +++ D L + LI Y K + V + I +K + + M+ L +FS + S S DL + A G F VH YVLR G +N LIT Y++C + + +F+ M+ RD+VSWN++I+GY+Q + CKA LF EM V + D TVVS+L AC + + G +H Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGS-DLSSEAIASVVASCAQLGSFD---LGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQN--VDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIH 471 HSP 3 Score: 84.3445 bits (207), Expect = 9.175e-16 Identity = 53/213 (24.88%), Postives = 100/213 (46.95%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 Q + LH + + D + + ++N Y K + + A+ +FD++ + + S+N M+ Y+ ++ L+L + L+PD T L +++G D + +H +++ G D + L LIT Y +C ++ + + + N+D+V W MI+G + G E+ +F EML S + SV+ +C Q G VH Sbjct: 162 QLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGD---GLRPDQQTFGASL-SVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSG-SDLSSEAIASVVASCAQLGSFDLGASVH 369 HSP 4 Score: 83.5741 bits (205), Expect = 1.565e-15 Identity = 52/208 (25.00%), Postives = 104/208 (50.00%), Query Frame = 1 Query: 223 LHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 +H ++ H D + LI Y+K L ++ +F+++ + + S+NA++ Y+ + L LF + Q + D+FT+ +L+A + K +H V+R + + L+ YS+C + +A+ FD +S +D+VSW +IAGY G + ++ E L+S + P+ V ++VL +C + + G+++ Sbjct: 368 VHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQV--DSFTVVSLLQACSSAGA-LPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSG-MEPNHVIFLAVLSSCSHNGMVQQGLKI 571 HSP 5 Score: 74.3294 bits (181), Expect = 9.495e-13 Identity = 48/146 (32.88%), Postives = 75/146 (51.37%), Query Frame = 1 Query: 364 YNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVL 801 +N+ + S H + L FSS+ ++ L PD FT +LKA L R S F +H VL G S ++ + L+ Y++ +A AR +F+ M RD+V W +MI YS+ G E +L EM ++P VT++ +L Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLAN---KLLPDTFTFPSLLKACASLQRLS-FGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEM-RFQGIKPGPVTLLEML 154
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP255_ARATH (Putative pentatricopeptide repeat-containing protein At3g25970 OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 6.560e-22 Identity = 63/241 (26.14%), Postives = 122/241 (50.62%), Query Frame = 1 Query: 136 RALQTLDCGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKIT-SKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSR--CDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +A T+D G + L+ D KQ+HA+++ + + + + +I+ Y+ S+ A+ VFD + SK + S+N+M+ +S H++ LF + + ++ D +T T +L A +G F K +H V++ GL+ N LI+ Y + + A +LF+ + ++D++SWNS+I G++Q G E+ F L S ++ D ++L +C + + G ++H Sbjct: 196 KAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW---VETDIYTYTGLLSACSGE-EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFF-SYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIH 431 HSP 2 Score: 98.9821 bits (245), Expect = 3.600e-20 Identity = 66/243 (27.16%), Postives = 125/243 (51.44%), Query Frame = 1 Query: 127 QIQRALQTLDCGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSK--SNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNR-DIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 Q+QR D Y L+ + K LH +I + + LI+ Y + + ++ A +F+ + SK + S+N+++ ++ + D ++ FS L SS ++K D++ + +L++ + L + +++H+ + G S+ F+++ LI YS+C + SAR F +S++ V+WN+MI GY+Q G + LF +M N V + D VT ++L AC + I G+E+ Sbjct: 295 QMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSS---EIKVDDYAFSALLRSCSDL-ATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNV-KLDHVTFTAILTACSHTGLIQEGLEL 532 HSP 3 Score: 89.7373 bits (221), Expect = 2.184e-17 Identity = 65/245 (26.53%), Postives = 117/245 (47.76%), Query Frame = 1 Query: 130 IQRALQTLDCGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAY-SVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFA---KEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGM-SNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 ++R+ +D ++ RL++ + +Q+H +I + ++ S L++ Y+K + A F +I+ + S+NA++ + V D+ T L + + + F L L D F K+VH+ VL+ GL + + N +I+ Y+ C V+ A+ +FDG+ ++D++SWNSMIAG+S+ E LF +M V D T +L AC +FG +H Sbjct: 92 MKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKT-AFWLLGLMEMKAAVTMDAGTFA------PLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV-ETDIYTYTGLLSACSGEEHQIFGKSLH 328 HSP 4 Score: 68.9366 bits (167), Expect = 3.989e-11 Identity = 39/150 (26.00%), Postives = 81/150 (54.00%), Query Frame = 1 Query: 259 DNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQ 708 D ++++++++ Y K L A +FD++ + S+N M+ Y+ D LF+ + S S D ++ + +LK + + R ++VH V++ G + ++++ + L+ Y++C+ V A F +S + VSWN++IAG+ Q Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSD---VDGYSFSRLLKGIASVKRFD-LGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQ 179
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PPR52_ARATH (Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.568e-22 Identity = 58/195 (29.74%), Postives = 104/195 (53.33%), Query Frame = 1 Query: 166 YGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREM 750 Y +L++ D + LHAR + PD F+ +KL++ Y+K + AR VFD + +++F+++AM+ AYS + + + +LF + + PD+F +L+ D K +HS V++ G+ S L + N ++ Y++C ++ A F M RD+++WNS++ Y Q G +EE L +EM Sbjct: 84 YLKLLESCIDSGSIHLGRILHARFGLFT-EPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD---GVLPDDFLFPKILQGCANC-GDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEM 273 HSP 2 Score: 81.2629 bits (199), Expect = 7.767e-15 Identity = 57/217 (26.27%), Postives = 108/217 (49.77%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKI-----TSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 +A +L R+ ++ P+ + +I+ Y K+ +A +F ++ ++ ++N ++ Y + + L LF + S P++ TI +L A L ++ +E+H VLR LD+ + N L Y++ D+ +R +F GM +DI++WNS+I GY G Y ALF +M + + P+ T+ S++ A G ++ G +V Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSR---FMPNSVTILSLLPACANLL-GAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQM-KTQGITPNRGTLSSIILAHGLMGNVDEGKKV 647 HSP 3 Score: 74.7146 bits (182), Expect = 7.270e-13 Identity = 54/221 (24.43%), Postives = 102/221 (46.15%), Query Frame = 1 Query: 136 RALQTLDCGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITS----KSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVT 786 R ++ D A+ ++ + +A +L + ++P + LI Y++ A + K+ + +F++ AM+ + M L +F + + + P+ TI + A + L + EVHS ++ G + + N L+ YS+C + AR +FD + N+D+ +WNSMI GY Q G+ + LF M ++ LRP+ +T Sbjct: 240 RRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM---FLAGVVPNAVTIMSAVSACSCL-KVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDAN-LRPNIIT 455
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP350_ARATH (Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.568e-22 Identity = 64/211 (30.33%), Postives = 106/211 (50.24%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGME 843 + + +H + P L + LI+ Y + L A +FD++ K++ S+N+++ AY + L LF L + L PD+ TI +L A S +E+H+Y+++ S+ ++N L+ Y+ C D+ AR F+ + +D+VSWNS+I Y+ GF LF EM+ S V P+ T S+L AC S + G E Sbjct: 348 EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL---WDSSLVPDSTTIASILPAYAESLSLSE-GREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV-NPNKSTFASLLAACSISGMVDEGWE 553 HSP 2 Score: 103.99 bits (258), Expect = 1.119e-21 Identity = 61/216 (28.24%), Postives = 107/216 (49.54%), Query Frame = 1 Query: 205 PRQAKQLHARLIFHSVAP-DNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 P+ K++H + + D + + +++ YSK + A +F+ + ++I ++N M+ Y+ + TD F + S L+PD T +L A L + +H Y +R G + L LI Y C + SA +FD M+ ++++SWNS+IA Y Q G LF+E+ +S ++ PD T+ S+L A +S + G E+H Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKM--SEQNGLQPDVITSINLLPASAILE-----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV-PDSTTIASILPAYAESLSLSEGREIH 454 HSP 3 Score: 94.7449 bits (234), Expect = 6.789e-19 Identity = 58/214 (27.10%), Postives = 110/214 (51.40%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDS-SLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 + K++HA +I D ++ + LI+ Y K A VF+++ + I S+N+M+ Y +L LF + KPD F+ L A + ++ + KE+H + +R +++ + ++ ++ YS+ +V+ A +F+GM R+IV+WN MI Y++ G + F++M L+PD +T +++L A S I+ G +H Sbjct: 148 EGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKC---GFKPDRFSTMSALGACSHVY-SPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIH 353 HSP 4 Score: 93.9745 bits (232), Expect = 1.158e-18 Identity = 55/192 (28.65%), Postives = 98/192 (51.04%), Query Frame = 1 Query: 274 SKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 ++ + ++ S + A +FD++ F +N M+ ++ +Y + ++ +S + + +K D FT V+K++ G+ K++H+ V++ G S +++ N LI+ Y + A +F+ M RDIVSWNSMI+GY G LF+EML +PD + +S L AC G E+H Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA---GVKADTFTYPFVIKSVAGI-SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHVYSPKMGKEIH 254
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP205_ARATH (Putative pentatricopeptide repeat-containing protein At3g01580 OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 8.568e-22 Identity = 58/190 (30.53%), Postives = 106/190 (55.79%), Query Frame = 1 Query: 283 INFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLR-CGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 + F K +S + AR +F ++T +S++ +N +L + S + + L FS + + + KPDNFT+ LKA G R+ + + +H +V + L S L++ + LI Y +C + A +FD + DIV+W+SM++G+ + G + FR M+ + + PD VT+++++ AC + S+ G VH Sbjct: 1 MGFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHM---FRDEEKPDNFTLPVALKAC-GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVH 186 HSP 2 Score: 96.6709 bits (239), Expect = 1.787e-19 Identity = 61/213 (28.64%), Postives = 112/213 (52.58%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGL-FRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 Q ++ H I + + +++ L++ Y K S +A VF +I K + S+ A++ ++++ M ++ FS + + +PD + VL + + L F + AK HSYV++ G DS+ F+ L+ YSRC + +A +F+G++ +D V W S+I GY G + F M+ S ++P+ VT +S+L AC + I G+ + Sbjct: 282 QGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIML--LENNTRPDAILMVKVLGSCSELGFLEQ--AKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 490 HSP 3 Score: 90.8929 bits (224), Expect = 9.803e-18 Identity = 54/214 (25.23%), Postives = 103/214 (48.13%), Query Frame = 1 Query: 175 LIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQ 816 L+ T R + +H +I + D L + L+N Y+KS + +A ++F I K + S++ ++ Y + + L +F+ + ++ P+ T+ CVL+A D ++ H +R GL++ + + L+ Y +C A A+F + +D+VSW ++I+G++ G F ML RPD + +V VL +C + Sbjct: 169 LVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE---PNVATVLCVLQACAAA-HDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSE 378
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein At4g37380, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.119e-21 Identity = 61/201 (30.35%), Postives = 100/201 (49.75%), Query Frame = 1 Query: 256 PDNFLASK--LINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALT--GLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 P+ L S +I Y+K ++ AR +FD + + I S+N M+ Y+ H D L LF L + KPD T+ L A + G R+ +H +V + ++ + GLI YS+C + A +F+ +DIV+WN+MIAGY+ G+ ++ LF EM L+P +T + L AC + + G+ + Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKP--KPDEITVVAALSACSQIGALETGRW---IHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRI 383 HSP 2 Score: 98.2117 bits (243), Expect = 6.140e-20 Identity = 68/244 (27.87%), Postives = 113/244 (46.31%), Query Frame = 1 Query: 220 QLHARLIFHSVAPDN---FLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASA-------------------------------RALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 Q+HA ++ H++ L KL Y+ + + +F + +F + A + S++ + L+ L SS ++ P+ FT + +LK+ + ++ K +H++VL+ GL ++ GL+ Y++ DV SA RALFD M RDIVSWN MI GY+Q GF + LF+++L +PD +TVV+ L AC Q + G +H Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSS---EINPNEFTFSSLLKSCS-----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIH 282
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP223_ARATH (Putative pentatricopeptide repeat-containing protein At3g11460 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.119e-21 Identity = 66/210 (31.43%), Postives = 106/210 (50.48%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 + LH + + + + + + I Y K S+ R +FD++ K + ++NA++ YS + + D L L+ + SS + PD FT+ VL + L + EV V G ++F+ N I+ Y+RC ++A ARA+FD M + +VSW +MI Y G E LF +M+ + RPDG V VL AC S G+E+ Sbjct: 176 RSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSS---GVCPDPFTLVSVLSSCAHLGA-KKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGI-RPDGAVFVMVLSACSHSGLTDKGLEL 380 HSP 2 Score: 103.605 bits (257), Expect = 1.461e-21 Identity = 72/258 (27.91%), Postives = 124/258 (48.06%), Query Frame = 1 Query: 79 ANSLSLNIQNLRANSGQIQRALQTLDCGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFS--YNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 + S+SL LR+ S D ++ +++ LP +QLH + + F+ + LI+ Y K + AR VF++ S S YNA++ Y+ + TD +F + + + D+ T+ ++ T + + +H ++ GLDS + ++N IT Y +C V + R LFD M + +++WN++I+GYSQ G + L+ +M +S V PD T+VSVL +C G EV Sbjct: 35 SESISLYRSMLRSGSSP--------DAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKET---GVSVDSVTMLGLVPLCT-VPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC-PDPFTLVSVLSSCAHLGAKKIGHEV 279
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP197_ARATH (Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana GN=PCMP-E26 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.119e-21 Identity = 60/214 (28.04%), Postives = 116/214 (54.21%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLK--ALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREML-NSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +Q+H ++ + D ++ + L++ YSK + +A VF + K + +NAM+ AY+ +D L LF + + + PD+FT++ V+ ++ GL+ + K VH+ + + + S+ + + L+T YS+C A +F M +D+V+W S+I+G + G ++E +F +M + L+PD + SV +AC + FG++VH Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ---KSVLPDSFTLSNVISCCSVLGLYN---YGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVH 499 HSP 2 Score: 99.7525 bits (247), Expect = 2.110e-20 Identity = 64/209 (30.62%), Postives = 109/209 (52.15%), Query Frame = 1 Query: 220 QLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 Q+H +I + + F+ S LI+ YSK A VF ++++++ ++N+M+ YS +++ ++ LF+ + S Q + PD+ +IT VL A++ + K +H Y LR G+ S L N LI Y +C A +F M ++ +++WN MI GY G +LF EM + PD VT +S++ AC S + G + Sbjct: 497 QVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLS---QGIFPDSVSITSVLVAISSTASLLK-GKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE-SPDDVTFLSLISACNHSGFVEEGKNI 700 HSP 3 Score: 99.3673 bits (246), Expect = 2.756e-20 Identity = 62/211 (29.38%), Postives = 106/211 (50.24%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 K +HA L + + + S L+ YSK A VF + K + ++ +++ + + + L++F + LKPD+ +T V A GL RF +VH +++ GL ++F+ + LI YS+C A +F MS ++V+WNSMI+ YS+ E LF ML+ + PD V++ SVL A ++ ++ G +H Sbjct: 393 KSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDD-DDSLKPDSDIMTSVTNACAGL-EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIF-PDSVSITSVLVAISSTASLLKGKSLH 600 HSP 4 Score: 88.1965 bits (217), Expect = 6.354e-17 Identity = 59/214 (27.57%), Postives = 105/214 (49.07%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKS-IFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 + KQ+H ++ +S+ D+FL + LI+ Y K I A VF +I KS + +N M++ + + +L L+ LA + S L +FT +S F +++H V++ GL + ++ L++ YS+C V A +F + ++ + WN+M+A Y++ + LF M VL PD T+ +V+ C +G VH Sbjct: 188 EGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYM-LAKNNSVKLVSTSFTGAL---GACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL-PDSFTLSNVISCCSVLGLYNYGKSVH 396 HSP 5 Score: 74.7146 bits (182), Expect = 7.270e-13 Identity = 57/221 (25.79%), Postives = 102/221 (46.15%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFD-------KITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKAL--TGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNR-DIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 K +H ++ D F+A+ L+N Y K L A VFD ++++ + +N+M+ Y + + + F + ++PD F+++ V+ + G FR K++H ++LR LD+ FL LI Y + A +F + ++ ++V WN MI G+ G E L+ N+ V + + L AC QS + FG ++H Sbjct: 80 KTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVF---GVRPDAFSLSIVVSVMCKEGNFRREE-GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSV-KLVSTSFTGALGACSQSENSGFGRQIH 295
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PPR84_ARATH (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.461e-21 Identity = 52/185 (28.11%), Postives = 102/185 (55.14%), Query Frame = 1 Query: 292 YSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 + + + +AR VFD + + ++ M+ AY + L LF+ + + P +I V L L ++ ++VH++++RC D +++ + L+T Y +C ++ A+ +FD S++DI+ WNS+I+GY+ G EE +F EM +S + P+ VT++++L AC + + G+E+ Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASL----QYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTM-PNKVTLIAILTACSYAGKLEEGLEI 454
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PPR43_ARATH (Pentatricopeptide repeat-containing protein At1g14470 OS=Arabidopsis thaliana GN=PCMP-A4 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.461e-21 Identity = 70/224 (31.25%), Postives = 107/224 (47.77%), Query Frame = 1 Query: 256 PDNFLAS--KLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSL-----------------ASSYSQD----------LKPDNFTITCVLK-ALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFG 837 P+N + S +I ++K L AR FD++ KS+ S+NAML Y+ + D LRLF+ + A S+ D + + C +K AL + R + G +L N +I+ Y+R D++SAR LFD M R++VSWNS+IAGY+ G F +M++ +PD VT++SVL ACG +D+ G Sbjct: 194 PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG 417 HSP 2 Score: 79.337 bits (194), Expect = 2.952e-14 Identity = 57/188 (30.32%), Postives = 95/188 (50.53%), Query Frame = 1 Query: 211 QAKQLHARLI-FHSVAPDNFLASKLINFYSKSNS-LIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVL 768 Q Q+HA+LI F+S+ ++ AS++I+ ++ + R +FD +T ++F N+M +S DM D LRL+ + + PD F+ V+K+ RF + V + G ++ N ++ Y + + V SAR +FD +S R WN MI+GY + G EE LF M + V+ Sbjct: 21 QLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRC---GIMPDAFSFPVVIKSA------GRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVV 199 HSP 3 Score: 74.7146 bits (182), Expect = 7.270e-13 Identity = 53/208 (25.48%), Postives = 98/208 (47.12%), Query Frame = 1 Query: 229 ARLIFHSVAPDNFLAS--KLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 AR IF+ + L + +I+ Y++ + AR +FD + +++ S+N+++ Y+ + + F + D KPD T+ VL A G D + Y+ + + + LI Y+R ++ A+ +FD M RD+VS+N++ ++ G E L +M + + PD VT SVL AC ++ + G + Sbjct: 318 ARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDY--GDSKPDEVTMISVLSAC-GHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGI-EPDRVTYTSVLTACNRAGLLKEGQRI 521 The following BLAST results are available for this feature:
BLAST of FC918250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC918250 ID=FC918250; Name=FC918250; organism=Citrus clementina; type=EST; length=849bpback to top |