FC918250
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP104_ARATH (Putative pentatricopeptide repeat-containing protein At1g64310 OS=Arabidopsis thaliana GN=PCMP-E65 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.253e-21 Identity = 72/243 (29.63%), Postives = 122/243 (50.21%), Query Frame = 1 Query: 127 QIQRALQTLDCGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRF--AKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 QI R+ D Y L + F++ + + +H I + D S ++ YSK+ +++A +F I + +N M++ Y + + LF+ + Q P+ +T+ + +GL S A VH++ L+ LDS ++ L+ YSRC +ASA ++F+ +S D+V+ +S+I GYS+ G ++E LF E+ S +PD V V VL +C + SD V G EVH Sbjct: 96 QILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ---PNCYTMVALT---SGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGK-KPDCVLVAIVLGSCAELSDSVSGKEVH 331 HSP 2 Score: 97.8265 bits (242), Expect = 8.019e-20 Identity = 59/211 (27.96%), Postives = 109/211 (51.66%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 ++LH+ + +A D + A++L FY+ ++ LI AR +FD +S+F +N+++ AY+ +T L LFS + S D +PDNFT C+ + + F D++ + +H + GL + ++ YS+ + A LF + + D+ WN MI GY GF+++ LF ++ +P+ T+V++ S ++ VH Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRS---DTRPDNFTYACLARGFSESF-DTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLF-NLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVH 230 HSP 3 Score: 97.8265 bits (242), Expect = 8.019e-20 Identity = 69/231 (29.87%), Postives = 114/231 (49.35%), Query Frame = 1 Query: 154 DCGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 +C L D L A +HA + ++ +++ L+N YS+ + A VF+ I+ + + ++++ YS + + L LF+ L S KPD + VL + L DS KEVHSYV+R GL+ + + + LI YS+C + A +LF G+ ++IVS+NS+I G GF F E+L ++ PD +T ++L C S + G E+ Sbjct: 206 NCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGK---KPDCVLVAIVLGSCAEL-SDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLI-PDEITFSALLCTCCHSGLLNKGQEI 431
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP232_ARATH (Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.473e-21 Identity = 60/217 (27.65%), Postives = 109/217 (50.23%), Query Frame = 1 Query: 202 LPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVL-RPDGVTVVSVLHACGQSSDIVFGMEVH 849 L Q Q+H L+ + ++ LI+ Y K + A VFD + +++ S++A++ + ++ +L LFS + Q + P+ FT + LKA GL ++H + L+ G + + + N L+ YS+C + A +F + +R ++SWN+MIAG+ G+ + F M + + RPD T+ S+L AC + I G ++H Sbjct: 21 LSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR---QGIYPNEFTFSTNLKAC-GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIH 233 HSP 2 Score: 90.8929 bits (224), Expect = 9.803e-18 Identity = 56/173 (32.37%), Postives = 97/173 (56.07%), Query Frame = 1 Query: 268 LASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMY-TDTLRLFSSLASSYSQDLKPDNFTITCVLKAL--TGLFRDSRFAKEVHSYVLRCGLD--SSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREM--LNSPV 765 + + L++ YSK + +A VF +I +S+ S+NAM+ + VH Y + L F + + ++ +PD FT+T +LKA TG+ K++H +++R G SS + L+ Y +C + SAR FD + + ++SW+S+I GY+Q G + E LF+ + LNS + Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGF-VHAGYGSKALDTFGMMQEANIKE-RPDEFTLTSLLKACSSTGMIYAG---KQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI 311 HSP 3 Score: 89.3521 bits (220), Expect = 2.852e-17 Identity = 63/218 (28.90%), Postives = 111/218 (50.92%), Query Frame = 1 Query: 217 KQLHARLI---FHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDS---RFAKEVHSYVLRC--GLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 KQ+H L+ FH + S L++ Y K L AR FD+I K++ S++++++ Y+ + + + LF L SQ D+F ++ ++ G+F D R K++ + ++ GL++S+ +N ++ Y +C V A F M +D++SW +I GY + G ++ +F EML + PD V ++VL AC S I G E+ Sbjct: 230 KQIHGFLVRSGFHCPSSATITGS-LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI---DSFALSSII----GVFADFALLRQGKQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNI-EPDEVCYLAVLSACSHSGMIKEGEEL 436
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.473e-21 Identity = 56/212 (26.42%), Postives = 111/212 (52.36%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGME 843 + +QLH + + + + + L++ Y+K +A +F + ++ S+ A++ Y ++ L+LF+ + S +L+ D T VLKA + F K++H++++R G ++F +GL+ Y++C + A +F+ M +R+ VSWN++I+ ++ G E F +M+ S L+PD V+++ VL AC + G E Sbjct: 368 QMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS---NLRADQSTFATVLKA-SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESG-LQPDSVSILGVLTACSHCGFVEQGTE 574 HSP 2 Score: 97.4413 bits (241), Expect = 1.047e-19 Identity = 58/211 (27.49%), Postives = 102/211 (48.34%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +QLHA + + D + +++++FYSK + +++ R +FD++ SYN ++ +YS D Y +L F + NF +L L + +++H L DS L + N L+ Y++C+ A +F + R VSW ++I+GY Q G + LF +M S LR D T +VL A + ++ G ++H Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM---QCMGFDRRNFPFATMLSIAANL-SSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN-LRADQSTFATVLKASASFASLLLGKQLH 475 HSP 3 Score: 88.5817 bits (218), Expect = 4.865e-17 Identity = 57/179 (31.84%), Postives = 91/179 (50.84%), Query Frame = 1 Query: 220 QLHARLIFHSVAPDNFL--ASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREM 750 Q+HA + + FL ++ L+ Y + L A +F++I K ++N ++ Y +YT+++ LF + S Q P +FT + VLKA+ GL D +++H+ + G + N ++ FYS+ D V R LFD M D VS+N +I+ YSQ YE FREM Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ---PSDFTFSGVLKAVVGL-HDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM 342 HSP 4 Score: 75.485 bits (184), Expect = 4.262e-13 Identity = 55/219 (25.11%), Postives = 107/219 (48.86%), Query Frame = 1 Query: 202 LPRQAKQLHARLIFHSVAPDNFLASK-LINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLV--NGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 L R+ + AR ++ + N +++ +I+ + K+ + AR +FD + +++ ++ ++ Y+ + + + +LF + S S L PD+ T T +L + +VH++ ++ G D++ FL N L+ Y + A LF+ + +D V++N++I GY + G Y E LF +M S +P T VL A D G ++H Sbjct: 58 LLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL-PDHVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSG-HQPSDFTFSGVLKAVVGLHDFALGQQLH 273
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP189_ARATH (Pentatricopeptide repeat-containing protein At2g36980, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E73 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.473e-21 Identity = 70/228 (30.70%), Postives = 110/228 (48.25%), Query Frame = 1 Query: 268 LASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDG---------------------------------MSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHAC-GQSSDIVFGMEVH 849 L SK+ + +KS + AR VFD + ++N ML +YS ++ + + LF+ L S D KPD+++ T +L L + +F +++ S V+R G +SL + N LI Y +C D SA +F M R +WN MI+G++ G E C +LF+EML S +PD T S+++AC SS++V+G VH Sbjct: 7 LTSKIASL-AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS---DAKPDDYSFTAILSTCASL-GNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESE-FKPDCYTFSSLMNACSADSSNVVYGRMVH 228 HSP 2 Score: 84.3445 bits (207), Expect = 9.175e-16 Identity = 49/182 (26.92%), Postives = 86/182 (47.25%), Query Frame = 1 Query: 274 SKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 + +I+ K +A VF K+I ++ M+ Y + LR F + S + D+F VL A +GL K +H ++ CG ++ N L+ Y++C D+ A F ++N+D+VSWN+M+ + G ++ L+ M+ S + +PD VT + +L C S Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKS---GVDSDHFAYGAVLHACSGLALLGH-GKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGI-KPDNVTFIGLLTTCSHS 451
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PPR70_ARATH (Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.237e-20 Identity = 58/199 (29.15%), Postives = 113/199 (56.78%), Query Frame = 1 Query: 229 ARLIFHSVAPDNFLA-SKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKAL--TGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREM--LNSPVLRPDGVTVVSVLHAC 810 AR +F ++ N ++ + +++ Y++S + A +F+ + + + S+NA+L A + + ++ + + LF + + S ++P+ T+ CVL A TG + AK +H++ R L S +F+ N L+ Y +C ++ A ++F S + + +WNSMI ++ G EE A+F EM LN ++PD +T + +L+AC Sbjct: 181 ARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS--IRPNEVTVVCVLSACAQTGTLQ---LAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNAC 374 HSP 2 Score: 95.1301 bits (235), Expect = 5.198e-19 Identity = 73/249 (29.32%), Postives = 119/249 (47.79%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYS-KSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDL------KPDNFTITCVLKAL--------TGLFRDSRFAKEVHSYVL--------------RCGLDSSLF---------LVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 KQ+ + +I ++ +FL KL+ F + + +L AR +FD+ + + Y A+L AYS +L L +S A S+ + + +P++F VLK+ T L F H YV+ L LF +++ Y+R D+++A ALF+ M RD+ SWN+++A +Q G + E +LFR M+N P +RP+ VTVV VL AC Q+ + +H Sbjct: 41 KQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYS------SSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIH 283
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PPR47_ARATH (Putative pentatricopeptide repeat-containing protein At1g17630 OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.237e-20 Identity = 70/287 (24.39%), Postives = 131/287 (45.64%), Query Frame = 1 Query: 157 CGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPD--------------------NFLASK--LINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLAS-SYSQDLKPDNFTITCVLKALT---------GLFRDSRFAK-------------------------EVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 CG + ++++F R+ A A +F SV + +L S+ LI+ Y K + A H+F +I +K I S+N+++ ++ + L LFS L ++ ++K + T T V+K FR +F+K E+H +V+R + ++ + N L+ Y++C ++ +F+ + ++D++SWNS+I GY GF E+ ++F M++S PDG+ +V+VL AC + + G E+ Sbjct: 272 CGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSG-FHPDGIALVAVLSACSHAGLVEKGREI 557 HSP 2 Score: 88.9669 bits (219), Expect = 3.725e-17 Identity = 66/228 (28.95%), Postives = 115/228 (50.44%), Query Frame = 1 Query: 184 HFTDYRL-----PRQAKQLHARLIFHS-VAPDNFLASKLINFYSKSNSLIQARHVFDKITS---KSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHA---CGQSSDIV 831 H+ D+ L +Q +Q+HA+++ + LA+ LI+ Y++ L+ AR+VF+ ++ + +N++L A H +Y + L L+ + + L D + + +L+A L R + H+ V++ GL +L +VN L+T Y + + A LF M R+ +SWN MI G+SQ E +F E + +PD VT SVL CG+ D++ Sbjct: 57 HYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQ---RGLTGDGYILPLILRACRYLGRFG-LCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIF-EWMQREEFKPDEVTWTSVLSCHSQCGKFEDVL 279
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP276_ARATH (Pentatricopeptide repeat-containing protein At3g49740 OS=Arabidopsis thaliana GN=PCMP-E84 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.237e-20 Identity = 67/272 (24.63%), Postives = 125/272 (45.96%), Query Frame = 1 Query: 127 QIQRALQTLDCGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNF--------------------------------LASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 ++ +L+ D + +I + +L + A ++ R+ V PD F +++ LI+ YSK+ + +A +F++ K++ S+NA++ + + + L FS L S + L PD +T++ +L + H+YVLR G + N LI YS+C + ++ +F+ MS +D+VSWNS+I+ YS+ G E ++ M + + PD T +VL AC + + G+E+ Sbjct: 344 KVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRIL-PDAYTLSTLLSICVST-SSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEI 613 HSP 2 Score: 81.2629 bits (199), Expect = 7.767e-15 Identity = 53/211 (25.12%), Postives = 102/211 (48.34%), Query Frame = 1 Query: 220 QLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPV-LRPDGVTVVSVLHACGQSSDIVFGMEVH 849 Q+H I +++ + YS A VF+ + K + ++N M+ +Y+ + + ++ + + +KPD FT +L T L D + V + +++ GL S + + N LI+ YS+ + A LF+ ++++SWN++I+G+ GF E F +L S V + PD T+ ++L C +S ++ G + H Sbjct: 309 QVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM---HIIGVKPDEFTFGSLLA--TSL--DLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTH 512 HSP 3 Score: 68.5514 bits (166), Expect = 5.210e-11 Identity = 58/201 (28.86%), Postives = 98/201 (48.76%), Query Frame = 1 Query: 256 PDNFLASKLINFYSKSNSLIQARHVFDKITSKS-IFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFD--GMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 PD + + L++ K + A VFDK+ + + +NAM+ + ++ LF + + ++ D F +L + F K+VHS V++ G + +VN LIT Y C V A +F+ ++ RD V++N +I G + G +E +FR+ML + LRP +T VSV+ +C S G +VH Sbjct: 121 PDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREM---HKLGVRHDKFGFATILSMCD--YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA-GFKRDESLLVFRKMLEAS-LRPTDLTFVSVMGSC---SCAAMGHQVH 311
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP228_ARATH (Pentatricopeptide repeat-containing protein At3g13880 OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.237e-20 Identity = 71/214 (33.18%), Postives = 106/214 (49.53%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVF---GMEVH 849 K H +I S+ P +L + L+N Y K L AR +FD++ ++I S+N+++ Y+ Y + LF + +LK D FT L G D + +H V+ GL +FL+N LI YS+C + A +LFD RD VSWNS+I+GY + G EE L +M + L + SVL AC + + F GM +H Sbjct: 67 KLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREA---NLKLDKFTYAGAL-GFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKM-HRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIH 275 HSP 2 Score: 82.8037 bits (203), Expect = 2.670e-15 Identity = 53/198 (26.77%), Postives = 96/198 (48.48%), Query Frame = 1 Query: 259 DNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTD--TLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 D + + L++ Y+K+ SL +A +F + SK++ +YNAM+ + D TD + F + L+P T + VLKA + + + +++H+ + + S F+ + LI Y+ F S +DI SW SMI + Q E LFR++ +S + RP+ TV ++ AC + + G ++ Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAA-KTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHI-RPEEYTVSLMMSACADFAALSSGEQI 481 HSP 3 Score: 82.4185 bits (202), Expect = 3.487e-15 Identity = 48/144 (33.33%), Postives = 75/144 (52.08%), Query Frame = 1 Query: 418 RLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 R SSL + L + + I A +G K H ++++ L+ L+L+N L+ Y +C ++ AR LFD M R+I+S+NS+I+GY+Q GFYE+ LF E + L+ D T L CG+ D+ G +H Sbjct: 32 RFLSSLCQPKNTALDSEGYKILFQTAAKSG---SVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREAN-LKLDKFTYAGALGFCGERCDLDLGELLH 171 HSP 4 Score: 75.8702 bits (185), Expect = 3.263e-13 Identity = 55/216 (25.46%), Postives = 99/216 (45.83%), Query Frame = 1 Query: 223 LHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAK--EVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQ-----GGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 LH ++ + ++ FL + LI+ YSK L QA +FD+ + S+N+++ Y + L L LA + L + + VLKA + K +H Y + G++ + + L+ Y++ + A LF M ++++V++N+MI+G+ Q E LF +M L P T VL AC + + +G ++H Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNL---LAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRG-LEPSPSTFSVVLKACSAAKTLEYGRQIH 381 HSP 5 Score: 74.7146 bits (182), Expect = 7.270e-13 Identity = 45/209 (21.53%), Postives = 101/209 (48.33%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGME 843 +Q+HA + ++ D F+ S LI Y+ S F + + I S+ +M+ + ++ LF L SS+ ++P+ +T++ ++ A F +++ Y ++ G+D+ + I+ Y++ ++ A +F + N D+ ++++MI+ +Q G E +F E + + ++P+ + VL AC + G++ Sbjct: 378 RQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH---IRPEEYTVSLMMSACAD-FAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIF-ESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLK 581
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.237e-20 Identity = 65/232 (28.02%), Postives = 116/232 (50.00%), Query Frame = 1 Query: 154 DCGAYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 D Y LI+ R + + L F+ P FL + LIN Y K N L A +FD++ +++ S+ M+ AYS ++ L L L +++P+ +T + VL++ G+ D R +H +++ GL+S +F+ + LI +++ + A ++FD M D + WNS+I G++Q + LF+ M + + + T+ SVL AC + + GM+ H Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALEL---LVLMLRDNVRPNVYTYSSVLRSCNGM-SDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI-AEQATLTSVLRACTGLALLELGMQAH 283 HSP 2 Score: 93.9745 bits (232), Expect = 1.158e-18 Identity = 56/201 (27.86%), Postives = 103/201 (51.24%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 + LH +I + D F+ S LI+ ++K A VFD++ + +N+++ ++ + L LF + + + T+T VL+A TGL + H ++++ D L L N L+ Y +C + A +F+ M RD+++W++MI+G +Q G+ +E LF M +S +P+ +T+V VL AC + Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRA---GFIAEQATLTSVLRACTGLAL-LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGT-KPNYITIVGVLFACSHA 372
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP398_ARATH (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.616e-20 Identity = 62/215 (28.84%), Postives = 110/215 (51.16%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKS-IFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 R+ K +H R++ + D L LIN Y ARHVF+ +S ++ +N+++ YS + M+ DTL +F L + PD+FT V+KA L R+ + +H+ V++ G + + + L+ Y++ + ++ +FD M RD+ SWN++I+ + Q G E+ LF M S P+ V++ + AC + + G E+H Sbjct: 21 RRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLN--CSICVPDSFTFPNVIKAYGALGREF-LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRM-ESSGFEPNSVSLTVAISACSRLLWLERGKEIH 231 HSP 2 Score: 100.138 bits (248), Expect = 1.616e-20 Identity = 61/229 (26.64%), Postives = 110/229 (48.03%), Query Frame = 1 Query: 163 AYGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 AYG L + F + +H ++ D +AS L+ Y+K N + VFD++ + + S+N ++ + L LF + SS +P++ ++T + A + L R KE+H ++ G + ++ + L+ Y +CD + AR +F M + +V+WNSMI GY G + C + M+ RP T+ S+L AC +S +++ G +H Sbjct: 116 AYGALGREFL-------GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESS---GFEPNSVSLTVAISACSRLLWLER-GKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT-RPSQTTLTSILMACSRSRNLLHGKFIH 332 HSP 3 Score: 92.0485 bits (227), Expect = 4.400e-18 Identity = 58/213 (27.23%), Postives = 105/213 (49.30%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 + K++H + + D ++ S L++ Y K + L AR VF K+ KS+ ++N+M+ Y D+ L + +P T+T +L A + R+ K +H YV+R +++ +++ LI Y +C + A +F SWN MI+ Y G + + ++ +M++ V +PD VT SVL AC Q + + G ++H Sbjct: 226 RGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKG---DSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS-RNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGV-KPDVVTFTSVLPACSQLAALEKGKQIH 433 HSP 4 Score: 90.1225 bits (222), Expect = 1.672e-17 Identity = 62/209 (29.67%), Postives = 101/209 (48.33%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGME 843 K +H +I V D ++ LI+ Y K A VF K S+N M+ +Y + + ++ + S +KPD T T VL A + L + K++H + L++ L++ L+ YS+C + A +F+ + +D+VSW MI+ Y G E F EM L+PDGVT+++VL ACG + I G++ Sbjct: 329 KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSV---GVKPDVVTFTSVLPACSQLAALEK-GKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG-LKPDGVTLLAVLSACGHAGLIDEGLK 532 HSP 5 Score: 68.9366 bits (167), Expect = 3.989e-11 Identity = 38/122 (31.15%), Postives = 59/122 (48.36%), Query Frame = 1 Query: 487 VLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNR-DIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +L+ T + R K VH +L GL + L LI Y C D SAR +F+ R D+ WNS+++GYS+ + + +F+ +LN + PD T +V+ A G G +H Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIH 130 The following BLAST results are available for this feature:
BLAST of FC918250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC918250 ID=FC918250; Name=FC918250; organism=Citrus clementina; type=EST; length=849bpback to top |