FC918250
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP435_ARATH (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.600e-20 Identity = 64/238 (26.89%), Postives = 112/238 (47.06%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLA----------------------------SSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 +++HA+++ + K++ Y KS L+ A+ +FD++ + + M+ YS + L LF + +++ + FT CVL A + L + VHS+V ++ S F+ N LI YSRC D+ AR +F M ++D++S+N+MI+G + G E FR+M+N RP+ VT+V++L+AC + G+EV Sbjct: 143 REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGA-LELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG-FRPNQVTLVALLNACSHGGLLDIGLEV 378 HSP 2 Score: 80.8777 bits (198), Expect = 1.014e-14 Identity = 51/176 (28.98%), Postives = 93/176 (52.84%), Query Frame = 1 Query: 223 LHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREM 750 +HA++I D F+ +LI S +S+ A VF +++ +++ Y AM+ + D + L+ + + + PDN+ IT VLKA D + +E+H+ VL+ G SS + ++ Y + ++ +A+ +FD M +RD V+ MI YS+ GF +E LF+++ Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHN---SVLPDNYVITSVLKAC-----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDV 215
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP214_ARATH (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 3.600e-20 Identity = 69/232 (29.74%), Postives = 118/232 (50.86%), Query Frame = 1 Query: 166 YGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYS---KSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSS-LASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 Y ++ + R + QLH +I SV + S+LI+F + ++ +L AR VF+ I S++ +N+M+ YS L + L YS PD FT VLKA +GL RD +F VH +V++ G + ++++ L+ Y C +V +F+ + ++V+W S+I+G+ + + FREM ++ V + + +V +L ACG+ DIV G H Sbjct: 6 YKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYS----PDYFTFPYVLKACSGL-RDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGV-KANETIMVDLLVACGRCKDIVTGKWFH 231 HSP 2 Score: 93.9745 bits (232), Expect = 1.158e-18 Identity = 50/181 (27.62%), Postives = 95/181 (52.49%), Query Frame = 1 Query: 268 LASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHAC 810 LA+ LI+ Y+K L AR++FD + +++ S+N+++ YS + + L +F + + PD T V++A + + S+ + +H+YV + G +V L+ Y++ D SA+ F+ + +D ++W +I G + G E ++F+ M PDG+T + VL+AC Sbjct: 253 LATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDL---GIAPDKVTFLSVIRA-SMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYAC 429 HSP 3 Score: 89.3521 bits (220), Expect = 2.852e-17 Identity = 57/203 (28.08%), Postives = 99/203 (48.77%), Query Frame = 1 Query: 265 FLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDS--------SLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 ++++ L++ Y + VF+ I ++ ++ +++ + ++ ++D + F + S+ + N TI L G +D K H ++ G D ++ L LI Y++C D+ +AR LFDGM R +VSWNS+I GYSQ G EE +F +ML+ + PD VT +SV+ A G +H Sbjct: 143 YVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKA----NETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGI-APDKVTFLSVIRASMIQGCSQLGQSIH 340
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP415_ARATH (Pentatricopeptide repeat-containing protein At5g43790 OS=Arabidopsis thaliana GN=PCMP-E30 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.701e-20 Identity = 66/225 (29.33%), Postives = 115/225 (51.11%), Query Frame = 1 Query: 193 DYRLPRQAKQLHARLI--FHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVH---DMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEV--HSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 D + R + LHA ++ V D F+ + L+ FY+ L +AR +F++I + ++N +L AY+ D + L LF + ++P+ ++ ++K+ L F + V H YVL+ L + F+ LI YS+C ++ AR +FD MS RD+ +N+MI G + GF +E L++ ++ S L PD T V + AC S + G+++ Sbjct: 125 DAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM------QVRPNELSLVALIKSCANL---GEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLI-SQGLVPDSATFVVTISACSHSGLVDEGLQI 339 HSP 2 Score: 82.8037 bits (203), Expect = 2.670e-15 Identity = 57/219 (26.03%), Postives = 112/219 (51.14%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDT---LRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRC--GLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQG---GFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 KQ+HA++I ++ + SKL++ S + L A + +I + S+F YN ++ + + T T L+ + SS S ++P+ FT + KA + R + +H++VL+ ++ F+ L+ FY+ C + AR+LF+ + D+ +WN+++A Y+ EE LF M +RP+ +++V+++ +C + V G+ H Sbjct: 26 KQIHAQIITIGLSHHTYPLSKLLHL-SSTVCLSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM----QVRPNELSLVALIKSCANLGEFVRGVWAH 239
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP313_ARATH (Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana GN=PCMP-H1 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.701e-20 Identity = 61/214 (28.50%), Postives = 112/214 (52.34%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITS--KSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGME 843 R K +HARL + + ++S L++ Y K N + AR VFD + +++ S+ +M+ AY+ + + + LF S ++ + D + + F + V+ A + L R ++ K H V R G +S+ + L+ Y++C ++ A +F + ++S+ SMI ++ G E LF EM+ + P+ VT++ VLHAC S + G+E Sbjct: 148 RIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSD-RANQFMLASVISACSSLGR-LQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRI-NPNYVTLLGVLHACSHSGLVNEGLE 358 HSP 2 Score: 91.2781 bits (225), Expect = 7.506e-18 Identity = 59/213 (27.70%), Postives = 104/213 (48.83%), Query Frame = 1 Query: 223 LHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGM--SNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVL--RPDGVTVVSVLHACGQSSDIVFGMEVH 849 LH + A D F + L+ Y K + AR +FD++ ++ S+ +++ Y+ + L +F + + + P+ +T V KA + L +SR K +H+ + GL ++ + + L+ Y +C+DV +AR +FD M R++VSW SMI Y+Q E LFR N+ + R + + SV+ AC + +G H Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHED--RPVPPNEYTFASVFKACSAL-AESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS-FNAALTSDRANQFMLASVISACSSLGRLQWGKVAH 259 HSP 3 Score: 68.9366 bits (167), Expect = 3.989e-11 Identity = 34/111 (30.63%), Postives = 59/111 (53.15%), Query Frame = 1 Query: 517 DSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 ++ F +H+ L+ G S F VN L+ Y + ++ +AR LFD M ++VSW S+I+GY+ G + ++F++M + P+ T SV AC ++ G +H Sbjct: 44 NAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIH 154
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP256_ARATH (Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana GN=PCMP-A5 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.701e-20 Identity = 64/228 (28.07%), Postives = 116/228 (50.88%), Query Frame = 1 Query: 166 YGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 Y RL + + L QA+++ + L+ S P FL ++ I Y K + AR +F+++ + S+NA++ A + + + + R+F + ++ + VLK+ GL D R +++H V++ G ++ L ++ Y +C ++ AR +FD + N VSWN ++ Y + GF +E +F +ML V RP TV SV+ AC +S + G +H Sbjct: 64 YERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD---GVRATETSFAGVLKSC-GLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNV-RPLNHTVSSVMLACSRSLALEVGKVIH 286 HSP 2 Score: 85.8853 bits (211), Expect = 3.154e-16 Identity = 55/187 (29.41%), Postives = 94/187 (50.27%), Query Frame = 1 Query: 292 YSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSN-RDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 Y+ S +AR +FD + ++I S+NAML Y VH D F +L +++ DN T+ +L +G+ D + K+ H ++ R G D+++ + N L+ Y +C + SA F MS RD VSWN+++ G ++ G E+ + F M +P T+ ++L C + G +H Sbjct: 339 YAMSGLTREARELFDLMPERNIVSWNAMLGGY-VHAHEWDEALDFLTLMRQEIENI--DNVTLVWILNVCSGI-SDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM--QVEAKPSKYTLATLLAGCANIPALNLGKAIH 519 HSP 3 Score: 81.2629 bits (199), Expect = 7.767e-15 Identity = 54/244 (22.13%), Postives = 106/244 (43.44%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREM------------------------------LNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 R +QLH ++ + + + L + +++ Y K + AR VFD+I + S S+N ++ Y + + +F + +++P N T++ V+ A + K +H+ ++ + + + + Y +CD + SAR +FD ++D+ SW S ++GY+ G E + LF M + + D VT+V +L+ C SD+ G + H Sbjct: 179 RLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLEL---NVRPLNHTVSSVMLACSRSLA-LEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAH 418 HSP 4 Score: 74.3294 bits (181), Expect = 9.495e-13 Identity = 50/213 (23.47%), Postives = 96/213 (45.07%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITS-KSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGME 843 + KQ H + H + +A+ L++ Y K +L A F +++ + S+NA+L + L F + + KP +T+ +L + K +H +++R G + + ++ YS+C A +F + RD++ WNS+I G + G +E LF +L + ++PD VT + +L AC + + G + Sbjct: 412 QMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM----QVEAKPSKYTLATLLAGCANI-PALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFM-LLENEGVKPDHVTFLGILQACIREGHVELGFQ 618
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP246_ARATH (Pentatricopeptide repeat-containing protein At3g22150, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.701e-20 Identity = 64/211 (30.33%), Postives = 111/211 (52.61%), Query Frame = 1 Query: 241 FHSVAPDNF------LASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGM--SNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 FH NF + + L+ YS+ S+ ++ VF + + + S+N M+ A+ + + + L L + Q K D T+T +L A + L R+ K+ H++++R G+ + + LI YS+ + ++ LF+G + RD +WNSMI+GY+Q G E+ +FR+ML + RP+ VTV S+L AC Q + G ++H Sbjct: 340 FHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK---QGFKIDYITVTALLSAASNL-RNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNI-RPNAVTVASILPACSQIGSVDLGKQLH 544 HSP 2 Score: 89.3521 bits (220), Expect = 2.852e-17 Identity = 55/197 (27.92%), Postives = 97/197 (49.24%), Query Frame = 1 Query: 259 DNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 D F+ S I+ Y++ + +R VFD ++I +N M+ Y +D +++ LF L + S+++ D T A++ L + ++ H +V + + + +VN L+ YSRC V + +F M RD+VSWN+MI+ + Q G +E L EM + D +TV ++L A + G + H Sbjct: 250 DLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELF--LEAIGSKEIVSDEVTYLLAASAVSAL-QQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEM-QKQGFKIDYITVTALLSAASNLRNKEIGKQTH 442 HSP 3 Score: 87.8113 bits (216), Expect = 8.299e-17 Identity = 61/226 (26.99%), Postives = 114/226 (50.44%), Query Frame = 1 Query: 175 LIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDK--ITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 L+ ++ R KQ HA LI + + + S LI+ YSKS + ++ +F+ + ++N+M+ Y+ + T +F + Q+++P+ T+ +L A + + K++H + +R LD ++F+ + L+ YS+ + A +F R+ V++ +MI GY Q G E +LF M S + +PD +T V+VL AC S I G+++ Sbjct: 425 LLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE---QNIRPNAVTVASILPACSQI-GSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGI-KPDAITFVAVLSACSYSGLIDEGLKI 644
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP159_ARATH (Pentatricopeptide repeat-containing protein At2g17210 OS=Arabidopsis thaliana GN=PCMP-E77 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 4.701e-20 Identity = 64/199 (32.16%), Postives = 109/199 (54.77%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLD-SSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHAC 810 +++H +I + + + ++ Y+ S+SL AR +FD+++ + + S++ ++ +Y L+LF + + +PD T+T VLKA T + D + VH + +R G D + +F+ N LI YS+ DV SA +FD + R+IVSWNS++AG+ Y+E +F M+ V D VTVVS+L C Sbjct: 166 EKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMV--HEAKTEPDCVTVTSVLKACT-VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAV-EVDEVTVVSLLRVC 359 HSP 2 Score: 92.4337 bits (228), Expect = 3.369e-18 Identity = 64/213 (30.05%), Postives = 99/213 (46.48%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 Q + + A L+ + + + +FY K L FD + S+ S+N ++ + + L FS L +P+ T+ V+ A L+ D +++H YV+R G + N ++ Y+ D + SAR LFD MS RD++SW+ +I Y Q LF+EM++ PD VTV SVL AC DI G VH Sbjct: 65 QGRCIQASLLKRGFESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV---WGFEPNTSTLVLVIHACRSLWFDG---EKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVH 270 HSP 3 Score: 72.7886 bits (177), Expect = 2.763e-12 Identity = 50/218 (22.94%), Postives = 99/218 (45.41%), Query Frame = 1 Query: 196 YRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLD-SSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 + P K +H +I + S LI+ Y+ + + A V D +T K + S + M+ + + + +F + + P+ T+ +L A + + D R +K H +R L + + + ++ Y++C + AR FD ++ ++I+SW +I+ Y+ G ++ ALF EM P+ VT ++ L AC + G+ + Sbjct: 362 FEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT------PNAITVISLLNACS-VSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEM-KQKGYTPNAVTYLAALSACNHGGLVKKGLMI 571
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP406_ARATH (Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20 Identity = 62/223 (27.80%), Postives = 110/223 (49.33%), Query Frame = 1 Query: 172 RLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGM 840 RL + D L A Q+H+R++ + LIN Y K ++ A+ VFD +++IF ++ AY + + L LFS + + +++ P+ +T +L ++ L + +H VL+ G + + + N L+ Y++ + AR F GM+ RDIV+WN+MI+G S G E F M+ + + P+ +T + VL AC + G+ Sbjct: 245 RLFSNLRDLNL---ALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDT---KEVPPNEYTFAILLNSIAELSLLKQ-GDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI-PNRITFIGVLQACSHIGFVEQGL 459 HSP 2 Score: 83.9593 bits (206), Expect = 1.198e-15 Identity = 60/217 (27.65%), Postives = 105/217 (48.39%), Query Frame = 1 Query: 208 RQAKQLHARLIF---HSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 R + +HA LI S A D + + LIN Y K ++AR +FD + +++ S+ AM+ Y + L+LF S+ +S + +P+ F T V K+ + R K+ H L+ GL S F+ N L+ YS C A + D + D+ ++S ++GY + G ++E + R+ N + + +T +S L D+ ++VH Sbjct: 48 RIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM--FFSGESRPNEFVATVVFKSCSNSGRIEE-GKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVW-NNLTYLSSLRLFSNLRDLNLALQVH 260
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN=PCMP-H53 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20 Identity = 60/212 (28.30%), Postives = 118/212 (55.66%), Query Frame = 1 Query: 214 AKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +KQ+H I + D+F+++ LI+ YS++ + +A +F++ + + ++NAM+ Y+ TL+LF+ + + Q + D+FT+ V K LF ++ K+VH+Y ++ G D L++ +G++ Y +C D+++A+ FD + D V+W +MI+G + G E +F +M VL PD T+ ++ A + + G ++H Sbjct: 436 SKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALM---HKQGERSDDFTLATVFKTCGFLFAINQ-GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL-PDEFTIATLAKASSCLTALEQGRQIH 641 HSP 2 Score: 95.1301 bits (235), Expect = 5.198e-19 Identity = 63/207 (30.43%), Postives = 99/207 (47.83%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYS-VHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRF---AKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSD 825 K HAR++ P+ FL + LI+ YSK SL AR VFDK+ + + S+N++L AY+ + + ++ L QD+ +T L + L S + ++ H Y + GLD F+ L+ Y + V + LF+ M RD+V WN M+ Y + GF EE L +S L P+ +T+ + G SD Sbjct: 59 KCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVV---YTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL-SSAFHSSGLNPNEITLRLLARISGDDSD 261 HSP 3 Score: 93.2041 bits (230), Expect = 1.975e-18 Identity = 61/194 (31.44%), Postives = 100/194 (51.55%), Query Frame = 1 Query: 268 LASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +++ LIN Y K AR VFD ++ + + S+N+++ + + + + + LF L LKPD +T+T VLKA + L +K+VH + ++ S F+ LI YSR + A LF+ N D+V+WN+M+AGY+Q + LF +++ R D T+ +V CG I G +VH Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC---GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLF-ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540 HSP 4 Score: 84.3445 bits (207), Expect = 9.175e-16 Identity = 57/206 (27.67%), Postives = 98/206 (47.57%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKA---LTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 Q KQ+HA I D +++S +++ Y K + A+ FD I ++ M+ + +FS + + PD FTI + KA LT L + +++H+ L+ + F+ L+ Y++C + A LF + +I +WN+M+ G +Q G +E LF++M S ++PD VT + VL AC S Sbjct: 535 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR---LMGVLPDEFTIATLAKASSCLTALEQ----GRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQM-KSLGIKPDKVTFIGVLSACSHS 732 HSP 5 Score: 82.4185 bits (202), Expect = 3.487e-15 Identity = 56/159 (35.22%), Postives = 80/159 (50.31%), Query Frame = 1 Query: 334 DKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDS-RFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHA 807 D + I N L Y Y+ L+ F+ + S D++ D +T +L T + DS ++VH L+ GLD L + N LI Y + AR +FD MS RD++SWNS+IAG +Q G E LF ++L L+PD T+ SVL A Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVES---DVECDQ--VTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG-LKPDQYTMTSVLKA 425
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP257_ARATH (Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana GN=PCMP-A6 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20 Identity = 59/180 (32.78%), Postives = 92/180 (51.11%), Query Frame = 1 Query: 301 SNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGM 840 ++ L A VF+++ +++ S+ AM+ AY + + +LF + D+KP+ FTI +L+A T L S + VH Y + G FL LI YS+C + AR +FD M + + +WNSMI G EE +LF EM + PD +T V VL AC + ++ G+ Sbjct: 198 NSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVD---DVKPNEFTIVNLLQASTQLGSLS-MGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGL 373 HSP 2 Score: 90.1225 bits (222), Expect = 1.672e-17 Identity = 54/180 (30.00%), Postives = 87/180 (48.33%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREM 750 Q KQ+H ++I H++ D L +LI+ S A VF+++ S S F++N M+ + SV+ + L LF + S+ D FT V+KA R +VH ++ G + +F N L+ Y +C S R +FD M R IVSW +M+ G + + +F +M Sbjct: 35 QLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF--DKFTFPFVIKACLAS-SSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQM 211 The following BLAST results are available for this feature:
BLAST of FC918250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >FC918250 ID=FC918250; Name=FC918250; organism=Citrus clementina; type=EST; length=849bpback to top |