FC920178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_METMJ (Phenylalanyl-tRNA synthetase alpha chain OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pheS PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.181e-33 Identity = 88/228 (38.60%), Postives = 122/228 (53.51%), Query Frame = 2 Query: 29 QNGHALSKEEISSLKARKLIVPQTWKGYSVRKGP------NYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHE-XXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTHL 691 + G E ++ L R L + + Y+V P + ++ A LTRE + G+WK L + Y+ + A G +HP ++ +++ I MGFEEM + V+SSFWNFDALFQPQ HPAR+ DTFFL E R LP Y ERV+ +HE W E+A + +LRTHTT++S ++ LA P P K F I RV+R EA+D THL Sbjct: 137 EKGEIADGEGVADLAKRGLAIEEETVAYTVSITPRGRELLSQGLDLREEAGTLTREQILSGEWKSLPLRRYDVTKLPKRAYPGKVHPYQRIIDEMRRILFDMGFEEM-SGGIVQSSFWNFDALFQPQDHPAREMQDTFFLGE---RRPLPAGY-ERVRDMHEHGGETSSTGWGGTWSAEKAEQCVLRTHTTSLS---IQHLAAHPKPPVKAFCIGRVYRREAIDPTHL 356
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_METAC (Phenylalanyl-tRNA synthetase alpha chain OS=Methanosarcina acetivorans GN=pheS PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.631e-33 Identity = 85/223 (38.12%), Postives = 121/223 (54.26%), Query Frame = 2 Query: 41 ALSKEEISSLKARKLIVPQTWKGYSVR---KGPNYAPKR---KKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXE-WKREEANKNLLRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTH 688 A + + L RKL++ K +V G A + ++ LT E L+ G WK +F+ Y + P G +HP ++ +Q++ IFL+MGF E+ ++SSFWNFDALFQPQ HPARD DTF L + +LP +Y ++V +HE W RE A +N+LRTHTT+V+ +K LA+ P P K F IDR +R E +D TH Sbjct: 153 AADEGTVKELLKRKLVIKHEEKSRTVSVTGAGSALAAEGIVLEEEIAQLTPELLKSGAWKGKKFRPYRLDIAPNPLYGVKIHPYRRLIEQMRQIFLEMGFTEIK-GGIIQSSFWNFDALFQPQDHPARDMQDTFHL---GSICQLPAEYSDKVAAMHESGGDIDSCGWGGIWDRELARRNVLRTHTTSVT---IKYLADNPEPPVKAFCIDRAYRRETIDPTH 368
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_METJA (Phenylalanyl-tRNA synthetase alpha chain OS=Methanocaldococcus jannaschii GN=pheS PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.436e-33 Identity = 81/206 (39.32%), Postives = 121/206 (58.74%), Query Frame = 2 Query: 77 RKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALA-EEPFAPKKYFSIDRVFRNEAVDRTHL 691 +++ + T KG K P + ++ T LTR+ + G WK+ + Y+ +P +HPL ++ +++K+I L MGF+E+ + VE+ FWNFD LF+PQ HPAR+ DTFFL+ P+ ++PED + +VK VHE ++ + + +LRTHTTA S R L +L+ EE P K F IDRVFRNEA+D HL Sbjct: 168 KEIKIKLTEKGKEFIKNPI---EIEEEITQLTRDIIISGKWKKAYIRPYDVKVPTKPIYPAKVHPLTRIIREVKEILLAMGFKEVKSP-IVETEFWNFDMLFEPQDHPAREMQDTFFLKYPN-EGDIPEDLLSKVKEVHE------RCWKYKFDENVSRRLILRTHTTASSIRYLASLSDEEKNKPHKVFCIDRVFRNEAIDYKHL 362
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_METTH (Phenylalanyl-tRNA synthetase alpha chain OS=Methanobacterium thermoautotrophicum GN=pheS PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.227e-32 Identity = 75/179 (41.90%), Postives = 106/179 (59.22%), Query Frame = 2 Query: 158 ATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHE-XXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTHL 691 AT +T E+L+ G W++L ++ YN +A+ G +HPL ++ +++ IFL++GF E VES+FWNFD LFQPQ H AR+ DTF+++ P+ T ED V V+ HE EW R+ A +++LRTHTT VS+R L EP P K FS+ RVFR E + HL Sbjct: 212 ATQVTHEHLKSGAWRKLHYRGYNIDAEYPLVYPGKMHPLRRIIDEIRSIFLKLGFTES-RGPIVESAFWNFDCLFQPQDHAAREMQDTFYVKNPAVTDLPCEDLVRAVQDAHETGGSTGSEGWQYEWDRDVARQSVLRTHTTCVSARFLS--ENEP--PLKMFSVGRVFRRETITYKHL 385
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_METMP (Phenylalanyl-tRNA synthetase alpha chain OS=Methanococcus maripaludis GN=pheS PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.486e-31 Identity = 72/186 (38.71%), Postives = 110/186 (59.14%), Query Frame = 2 Query: 149 KKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEW--KREE--ANKNLLRTHTTAVSSRMLKALAE-EPFAPKKYFSIDRVFRNEAVDRTHL 691 K+ T LTRE + G WK+ + Y+ + HP+ K+ +++ ++ + MGF+E+ + V++ FWNFD LF+PQ HPARD DTFF++ P+T + +P++ +E+VK +HE W K +E + + +LRTHTT S + L +L+E E P K F IDRVFRNE +D HL Sbjct: 195 KEEITQLTREMIVSGKWKDYFIRPYDAKIPTEDIYPAKAHPMSKIIQEVNEVLISMGFKEVKSQ-IVQTEFWNFDTLFEPQDHPARDMQDTFFVKYPNTGK-VPKELLEKVKGIHECGTIDGEKISKGWCYKFDENVSKRTVLRTHTTVSSIKYLASLSESERENPHKVFCIDRVFRNETIDYKHL 378
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_METM7 (Phenylalanyl-tRNA synthetase alpha chain OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pheS PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.085e-30 Identity = 70/186 (37.63%), Postives = 107/186 (57.53%), Query Frame = 2 Query: 149 KKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEW----KREEANKNLLRTHTTAVSSRMLKALAE-EPFAPKKYFSIDRVFRNEAVDRTHL 691 K+ T LTRE + G W + + Y+ + HP+ K+ +++ ++ + MGF+E+ + V++ FWNFD LF+PQ HPARD DTFF++ P+ T +P+D +E+VK +HE W + + + +LRTHTT S + L +L+E E P+K F IDRVFRNE +D HL Sbjct: 195 KEEITQLTREMIVSGKWNDYTIRPYDAKIPTEEIYPVKAHPMSKIIQEVNEVLISMGFKEVKSQ-IVQTEFWNFDTLFEPQDHPARDMQDTFFVKYPN-TGIVPKDLLEKVKGIHECGTIGSEKISKGWCYKFDEKVSERTVLRTHTTVSSIKYLASLSETERENPQKVFCIDRVFRNETIDYKHL 378
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_THEGJ (Phenylalanyl-tRNA synthetase alpha chain OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pheS PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.722e-30 Identity = 80/216 (37.04%), Postives = 113/216 (52.31%), Query Frame = 2 Query: 59 ISSLKARKLIVPQTWKGYSVR---KGPNYAPK--RKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTHL 691 + LK RK+ +T +V G APK K+ + LT E ++ G W+E+EF+ ++ A + G P +++ ++MGF EM ++ +E+ FWNFDALFQPQ HPAR+ DT+ L+ P + E+ VERVK HE W E A + R H TA+S R L E P KYF+I RVFR + +DRTHL Sbjct: 164 VKELKRRKIGEEETVTERTVEITPAGEELAPKVELKREVSVLTPELIKSGKWREVEFRRFDIKAPVRRIYPGKKQPYRAFLDKIRRRLIEMGFIEMTVDSLIETQFWNFDALFQPQNHPAREWTDTYQLKYPKSGFLPEEELVERVKTAHERGLAGSRGWGYVWSPERAMLLMPRAHGTALSGRQLAKGVE---IPGKYFTIQRVFRPDVLDRTHL 376
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_METM5 (Phenylalanyl-tRNA synthetase alpha chain OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pheS PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.556e-30 Identity = 70/186 (37.63%), Postives = 106/186 (56.99%), Query Frame = 2 Query: 149 KKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEW----KREEANKNLLRTHTTAVSSRMLKALAE-EPFAPKKYFSIDRVFRNEAVDRTHL 691 K+ T LTRE + G W + + Y+ + HP+ K+ +++ ++ + MGF+E+ + V++ FWNFD LF+PQ HPARD DTFF++ P+ T +P+D +E+VK +HE W + + +LRTHTT S + L +L+E E +K F IDRVFRNEA+D HL Sbjct: 195 KEEITQLTREMIVSGKWNDYFIRPYDAKIPTEELYPAKAHPMSKIIQEVNEVLISMGFKEVKSQ-IVQTEFWNFDTLFEPQDHPARDMQDTFFVKYPN-TGTVPKDLLEKVKGIHECGTIGDEKISKGWCYNFDENVSERTVLRTHTTVSSIKYLASLSECERENAQKVFCIDRVFRNEAIDYKHL 378
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_THEON (Phenylalanyl-tRNA synthetase alpha chain OS=Thermococcus onnurineus (strain NA1) GN=pheS PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.065e-30 Identity = 78/218 (35.78%), Postives = 112/218 (51.38%), Query Frame = 2 Query: 56 EISSLKARKLIVPQTWKGYSVRKGP------NYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTHL 691 +++ LK RK+ +V P N + K+ + LT E ++ G W+E+EFK +N A + G P +++ ++MGF EM ++ +E+ FWNFDALFQPQ HPAR+ DT+ L+ P + ++ VERVK HE W E A + R H TA+S R L E P KYF+I RVFR + +DRTHL Sbjct: 163 KVNDLKRRKIAEEDIVTERTVEITPEGEELANKGLELKEEVSTLTPELIKSGKWREVEFKRFNIQAPVRRIYPGKKQPYRAFLDKIRRRLIEMGFIEMTVDSLIETQFWNFDALFQPQNHPAREWTDTYQLKYPKSGYLPNKELVERVKTAHERGLAGSRGWGYVWSPERAMLLMPRAHGTALSGRQLAKGVE---IPGKYFTIQRVFRPDVLDRTHL 377
BLAST of FC920178 vs. ExPASy Swiss-Prot
Match: SYFA_METLZ (Phenylalanyl-tRNA synthetase alpha chain OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=pheS PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.065e-30 Identity = 73/184 (39.67%), Postives = 110/184 (59.78%), Query Frame = 2 Query: 146 RKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELP-EDYVERVKRVHE-XXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEEPFAPKKYFSIDRVFRNEAVDRTHL 691 R++ AT LTRE + G+WK L ++Y+ + + GG +HP ++ +++D+ +MGF E + V++SFWNFD+L+QPQ HPAR+ DTF L E ELP + E+++ +H+ EW E K +LRTH+T++S ++ LAE P P K FSI RV+R E +D THL Sbjct: 178 REEVAT-LTREQILSGEWKSLPLRKYSIDKLPKKIYGGRVHPNQQILDEIRDLLFEMGFTEFH-GSIVQNSFWNFDSLYQPQDHPAREMQDTFHLAE-----ELPLPNGWEKIRDIHKFGGDTGSTGWGGEWSPEVGKKCVLRTHSTSLS---IQYLAEHPNPPLKAFSISRVYRRETIDPTHL 351 The following BLAST results are available for this feature:
BLAST of FC920178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920178 ID=FC920178; Name=FC920178; organism=Citrus clementina; type=EST; length=692bpback to top |