FC920191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL31_ARATH (60S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5) HSP 1 Score: 261.922 bits (668), Expect = 2.443e-69 Identity = 121/137 (88.32%), Postives = 133/137 (97.08%), Query Frame = 3 Query: 3 RKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRS 413 RKMKGLKQKKAH+MEIQ+NGG++AQKVDFAY FFEKQIPI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY+LGK E+H+AMTE+DR+ Sbjct: 169 RKMKGLKQKKAHMMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTEYDRT 305
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_ORYSJ (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2) HSP 1 Score: 261.151 bits (666), Expect = 4.167e-69 Identity = 120/137 (87.59%), Postives = 132/137 (96.35%), Query Frame = 3 Query: 3 RKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRS 413 RKMKGLKQKKAHLMEIQ+NGG++A KVD+ Y FFEK+IP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK+ QESH+A TEFDR+ Sbjct: 169 RKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEFDRT 305
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4) HSP 1 Score: 254.603 bits (649), Expect = 3.900e-67 Identity = 116/137 (84.67%), Postives = 130/137 (94.89%), Query Frame = 3 Query: 3 RKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRS 413 RKMKGLKQKKAHL EIQ+NGG +A+KVD+A FEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+Y++GK QE+HSAMTE+DR+ Sbjct: 169 RKMKGLKQKKAHLNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRT 305
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_ASPFU (60S ribosomal protein L3 OS=Aspergillus fumigatus GN=rpl3 PE=1 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.261e-49 Identity = 92/132 (69.70%), Postives = 109/132 (82.58%), Query Frame = 3 Query: 18 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRS 413 LKQKKAHLMEIQVNGGSVA KVDFA FEK I ID++F+KDEMID+I VTKG G++GV +RWG +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N K++++GK S E +A T+FD S Sbjct: 172 LKQKKAHLMEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEG-NASTDFDIS 302
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_MOUSE (60S ribosomal protein L3 OS=Mus musculus GN=Rpl3 PE=2 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 6.256e-49 Identity = 92/138 (66.67%), Postives = 114/138 (82.61%), Query Frame = 3 Query: 18 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRS 413 L+QKKAHLMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+FTVARAGQ GYHHRTE+NKKIYK+G+ ++A T++D S Sbjct: 173 LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFTVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLS 310
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_NEUCR (60S ribosomal protein L3 OS=Neurospora crassa GN=rpl-3 PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.067e-48 Identity = 89/130 (68.46%), Postives = 106/130 (81.54%), Query Frame = 3 Query: 18 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 407 LKQKKAHLMEIQ+NGGSVA KV+F +G FEK + ID++F+KDE+ID+I VTKG G+ GV RWG +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK E SA TE D Sbjct: 172 LKQKKAHLMEIQINGGSVADKVEFGHGLFEKPVSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGKGDAED-SAATEVD 300
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_DEBHA (60S ribosomal protein L3 OS=Debaryomyces hansenii GN=RPL3 PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.067e-48 Identity = 91/136 (66.91%), Postives = 108/136 (79.41%), Query Frame = 3 Query: 6 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRS 413 K L QKKAHL EIQVNGGSV+ KVD+A FEK + +D+VF+KDEM+D+ VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V +TVARAGQNG+HHRT +N K+Y++G A ES S TEFDR+ Sbjct: 167 KKTPLAQKKAHLAEIQVNGGSVSDKVDWAKEHFEKTVSVDSVFEKDEMVDVAAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPANVQWTVARAGQNGFHHRTSINHKVYRVGSAGDES-SGATEFDRT 301
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_RAT (60S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3) HSP 1 Score: 192.586 bits (488), Expect = 1.820e-48 Identity = 91/138 (65.94%), Postives = 114/138 (82.61%), Query Frame = 3 Query: 18 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRS 413 L+QKKAHLMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A T++D S Sbjct: 173 LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLS 310
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.820e-48 Identity = 91/138 (65.94%), Postives = 114/138 (82.61%), Query Frame = 3 Query: 18 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRS 413 L+QKKAHLMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A T++D S Sbjct: 173 LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLS 310
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.820e-48 Identity = 89/132 (67.42%), Postives = 110/132 (83.33%), Query Frame = 3 Query: 18 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRS 413 L QKKAHL EIQ+NGGSV++KVD+A FEK + +D+VF+++EMID+I VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N K+Y++GK E ++A TEFDR+ Sbjct: 172 LVQKKAHLAEIQLNGGSVSEKVDWAREHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKVYRIGKGGDEGNAA-TEFDRT 302 The following BLAST results are available for this feature:
BLAST of FC920191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920191 ID=FC920191; Name=FC920191; organism=Citrus clementina; type=EST; length=723bpback to top |