FC920200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920200 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 44/130 (33.85%), Postives = 74/130 (56.92%), Query Frame = 3 Query: 321 RSLSQVLNFMDQMTESPFF-------SGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIR------XXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEER 671 R++ Q+++ MD++ E SGT G +R WD + ++ + + DMPGL KEDV+VS+E + LVI+ + Y +R+ LP+ + + D+IKAE+KNGVL +++PK + E+ Sbjct: 100 RTMRQMIDTMDRLFEDTMTFPGRNRASGT-GEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGRDKHSWGRNYSSYDTRLSLPDNVVK-DKIKAELKNGVLFISIPKTEVEK 227
BLAST of FC920200 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.498e-13 Identity = 44/126 (34.92%), Postives = 71/126 (56.35%), Query Frame = 3 Query: 321 RSLSQVLNFMDQMTESPFFSGTR----GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVRR-----YTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEER 671 RS+ Q+L+ MD++ E R G +R W+ K+ + + + DMPG+ KEDV+VS+E + LVI+ R Y +R+ LP+ + +++KAE+K+GVL +T+PK K ER Sbjct: 100 RSMRQMLDTMDRIFEDAITIPGRNIGGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGGEDCWSRKSYSCYDTRLKLPDNCEK-EKVKAELKDGVLYITIPKTKIER 224
BLAST of FC920200 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.194e-12 Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 3 Query: 321 RSLSQVLNFMDQMTE--------SPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIR-----------XXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEER 671 R++ Q+L+ MD++ + +P S G +R WD E D + + DMPGL +E+V+V +E + LVIR SV Y R+ LP++ ++ +++AE+KNGVL VTVPK + ER Sbjct: 98 RTMRQMLDTMDRIFDDVALGFPATPRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSSYDMRLALPDECDKS-KVRAELKNGVLLVTVPKTEVER 232 The following BLAST results are available for this feature:
BLAST of FC920200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920200 ID=FC920200; Name=FC920200; organism=Citrus clementina; type=EST; length=682bpback to top |