FC920203

Overview
NameFC920203
Unique NameFC920203
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.013e-13
Identity = 47/142 (33.10%), Postives = 72/142 (50.70%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQ---EEMAVLTRALASAGTEPVNLAQ 578
            PPGP   P+VGN+  LG  PH+S+A  ++T+GP+M L+LG              + L+ HD   S R  N   +   ++   IV+ P   RWR L+K  + +L S + LD  + +R    EE+  L       G E ++LA+
Sbjct:   39 PPGPPILPLVGNIFQLGFNPHRSLAAFSKTYGPIMSLKLGRLTAVVISSPEAAKEALRTHDHVMSARTFNDALRAFDHHKHSIVWIPPSARWRFLKKTITKYLLSPQNLDAIQSLRMRKVEELVSLVNEFRERG-EAIDLAR 179          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.727e-13
Identity = 56/180 (31.11%), Postives = 82/180 (45.56%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGP--LMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT----EPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPEADEFN 683
            PPG  P  I+G+L  +G   H SI  L   HG   L+ LR+G                L+  D  F++RPP   A+ I Y   D+ F PYG   R  RK+ + H+ S K +  +RH RQEE+ ++   + +A T      V+L+  L+    + + R +LG      G      E  E N
Sbjct:   62 PPGKLP--IIGHLHLIGAETHISIRDLDAKHGRNGLLLLRIGAVPTLFVSSPSAADAVLRTQDHIFASRPPWMAAEIIRYGPSDVAFVPYGEYGRQGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMDKIRAAATAAPPAAVDLSDLLSGYTNDVVSRAVLGASHRNQGRNRLFSELTEIN 239          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.256e-13
Identity = 48/161 (29.81%), Postives = 75/161 (46.58%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGP-MPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL---ASAGTEPVNLAQRLNLCVVNALGRVMLGFR 632
            PPGP P P+ GN   +G  + H+++  LA+  G ++ LR+G              + L      F +R  N          QD+VF  YG  WR +R+I +V  F+ K +  YR+  +EE A +   +     A T  + L +RL L + N + R+M   R
Sbjct:   34 PPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPGAATHGIVLRRRLQLMMYNNMYRIMFDRR 194          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.256e-13
Identity = 51/162 (31.48%), Postives = 76/162 (46.91%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDG 647
            PP P+  PI+GNL  LG +PH ++  +AR HGP+M L LG                   H+++ S      G++  A   Q  V   YG  WR L+ I  V L S K +  +R VR+EE  +L + +  +    VNL+        + + R  +G R +G G
Sbjct:   50 PPSPRKLPILGNLLQLGSLPHHNLRSMARKHGPIMLLHLGSVRPVSSRRRPRGN-----HENSRSRLRRPRGSRSAALQLQGRV-GGYGEYWRQLKTICVVQLLSNKRVQSFRSVREEETELLMKKIGDSSGN-VNLSHMFTQLTNDVVCRSAIG-RKYGAG 203          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.947e-13
Identity = 48/161 (29.81%), Postives = 76/161 (47.20%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGP-MPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVL---TRALASAGTEPVNLAQRLNLCVVNALGRVMLGFR 632
            PPGP P PI GN   +G  + H+++  LA+  G ++ LR+G              + L      F +R  N          QD+VF  YG  WR +R+I +V  F+ K +  YR+  + E A +    +   +A TE + + +RL L + N + R+M   R
Sbjct:   34 PPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGEILLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEAEAAAVVDDVKKNPAAATEGIVIRRRLQLMMYNNMFRIMFDRR 194          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.947e-13
Identity = 41/141 (29.08%), Postives = 73/141 (51.77%), Query Frame = 3
Query:  171 PKPWPIVGNLPHL--GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLN 587
            P   P++G+L  L  G  P   +  +AR +GP+ +++LG              Q +K+ D NF++R  + G++ + Y+  DI+F PY   W  +RKI    L S K +  +  +RQEE+  L R +  +   PV++ + ++
Sbjct:   35 PPKLPVIGHLHLLWGGLPPQHLLRSIAREYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDSVGSRIMWYDNDDIIFSPYNDHWHQMRKICVSELLSPKNVRSFGFIRQEEIERLIRVMKQSEGAPVDVTEEVS 175          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.848e-13
Identity = 48/161 (29.81%), Postives = 74/161 (45.96%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGP-MPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL---ASAGTEPVNLAQRLNLCVVNALGRVMLGFR 632
            PPGP P P+ GN   +G  + H+++  LA+  G +  LR+G              + L      F +R  N          QD+VF  YG  WR +R+I +V  F+ K +  YR+  +EE A +   +     A T  + L +RL L + N + R+M   R
Sbjct:   34 PPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPDLSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPEAATNGIVLRRRLQLMMYNNMYRIMFDRR 194          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.848e-13
Identity = 50/172 (29.07%), Postives = 73/172 (42.44%), Query Frame = 3
Query:  180 WPIVGNLPHL--GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL---------ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSD 662
            WPI+G+LP L     PH+++  LA  +GP+  +++G              +    +D   S+ P    A  + YN   IV  PYGP WR LRKI      S   ++   HVR  E+      L           +G   V L Q  +L V N + R++ G R F   T   +
Sbjct:   44 WPIIGHLPLLLGSKTPHKTLGDLADKYGPIFSIKIGAKNAVVVSNWEMAKECYTTNDIAVSSLPDLISANLLCYNRSMIVVAPYGPYWRQLRKILMSEFLSPSRVEQLHHVRVSEVQSSITELFRDWRSNKNVQSGFATVELKQWFSLLVFNMILRMVCGKRYFSASTSDDE 215          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.564e-13
Identity = 39/119 (32.77%), Postives = 63/119 (52.94%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRP-PNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQE 515
            PPGP   PI GN+  LG  P++ +A L + +GP+++L+LG              +  K HD +F+NR  P+    H +Y    +   PYGP WR  R+I ++ +F  K + +   VR++
Sbjct:   36 PPGPPGLPIFGNMFELGTEPYKKMAVLRQKYGPVLWLKLGSTYTMVVQTAQASEELFKNHDISFANRVIPDVNQAH-SYYQGSLAIAPYGPFWRFQRRICTIEMFVHKKISETEPVRRK 153          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13
Identity = 55/174 (31.61%), Postives = 87/174 (50.00%), Query Frame = 3
Query:  162 PPGPKPW-PIVGNLPHLGPMPHQSIAGLART-----HGPLMYLRLGFXXXXXXXXXXXXXQ--FLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEM-AVLTRALASAGTEP--VNLAQRLNLCVVNALGRVMLGFRVFGDGT 650
            PP P  W PI+G+L  L P  H+++   + T      G +M LRLG              +  F K +D   +NRP     KH+ YN  +++  PYG  WR LR++ ++ +FS   L+ + +VR +E+  +++R    AGT+   V L   L     N + R+M G R +G+ T
Sbjct:   34 PPSPPGWLPIIGHLRLLKPPIHRTLRSFSETLDHNDGGGVMSLRLGSRLVYVVSSHKVAAEECFGK-NDVVLANRPQVIIGKHVGYNNTNMIAAPYGDHWRNLRRLCTIEIFSTHRLNCFLYVRTDEVRRLISRLSRLAGTKKTVVELKPMLMDLTFNNIMRMMTGKRYYGEET 206          
The following BLAST results are available for this feature:
BLAST of FC920203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
C76C3_ARATH1.013e-1333.10Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C71C2_MAIZE1.727e-1331.11Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
TCMO_POPTM2.256e-1329.81Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
C71A8_MENPI2.256e-1331.48Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
TCMO_HELTU2.947e-1329.81Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
C7D94_MENGR2.947e-1329.08Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
TCMO_POPKI3.848e-1329.81Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
C82A2_SOYBN3.848e-1329.07Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C76A2_SOLME6.564e-1332.77Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C81D1_ARATH8.573e-1331.61Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC32005C11EF RVDevelop1 Citrus clementina cDNA clone C32005C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920203 ID=FC920203; Name=FC920203; organism=Citrus clementina; type=EST; length=685bp
GGCGACTACTCGTACCATTTCTACCCTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGA
ATGCCCTAGGGCGGGTGATGCTAGGCTTCAGAGTGTTCGGCGACGGTACC
GGAGGGAGCGACCCCGAGGCTGACGAGTTCAATCA
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