FC920203

Overview
NameFC920203
Unique NameFC920203
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..685. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.786e-17
Identity = 44/129 (34.11%), Postives = 66/129 (51.16%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALAS 548
            PPGP   P++GNL  LG + H S+  L+  HGP+M +R G              + LK HD    NRP         + Y+DI F  YG  WR ++K   + LFS K    +R++R+EE  +L + +++
Sbjct:   29 PPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISN 157          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.278e-16
Identity = 45/156 (28.85%), Postives = 83/156 (53.21%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 626
            PPGP   P++G+L  L G +P  ++A +A+ +GP+ +++LG              + +K+ D   +NR  + G + + Y+ +DI+F PY   WR +RKI    L S + +  +  +RQ+E++ L R L S+    V++ +R+     + + R   G
Sbjct:   36 PPGPPKLPLIGHLHLLWGKLPQHALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANRFESIGTRIMWYDNEDIIFSPYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSSAGAAVDMTERIETLTCSIICRAAFG 191          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.669e-16
Identity = 53/165 (32.12%), Postives = 85/165 (51.52%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL---ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDG 647
            PPGP   PI+GN+  LG +PH+S+  L+  +GP++ + LG              + LK+HDS    RP  S  K   Y+   + F  +G  +R +RK+  + LFS K  + +R++R+EE++ L  +    AS+G+  V+L   L   V +   R+  G    G G
Sbjct:   37 PPGPPRLPILGNIHQLGSLPHRSLRDLSLKYGPVITVYLGSVRTVVVHSPETAEEVLKLHDSECCTRPKLSITKSFFYDGLGLGFTKWGDYYRDVRKLCVLELFSVKRANSFRNIREEELSRLVNSFSDSASSGSS-VDLTANLAKFVASFTCRMAFGLSFQGSG 200          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.180e-16
Identity = 54/164 (32.93%), Postives = 78/164 (47.56%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASA--------GTEPVNLAQRLNLCVVNALGRVMLG 626
            PPGP   P+VG L HL    P  ++  LA  +GP+M+LR+G              + L+  D  F++RP    ++   Y+  D+ F PYG  WRMLRK+ +V L S K +     VR +E   L R + +A        G +PV LA+ L  C      +   G
Sbjct:   60 PPGPWNLPLVGGLLHLLRSHPQVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNIKAASSGHGGGGGKKPVTLARLLTTCTNTITAKAAFG 223          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.180e-16
Identity = 50/179 (27.93%), Postives = 91/179 (50.84%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLA------QRLNLCVVNALGRVMLGFRVFGDGTGGSDPEADEF 680
            PPGP+PWP+VGNL  + P+  +  A  A+++GP++ +  G              + LK HD   ++R  +  A   + + +D+++  YGP +  +RK+ ++ LFS K L+  R +R++E+  +  ++ +  T   NL       + L +   N + R+  G R F +  G  D +  EF
Sbjct:   29 PPGPRPWPVVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKR-FVNSEGVMDEQGVEF 206          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.343e-16
Identity = 53/164 (32.32%), Postives = 83/164 (50.61%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLGFRVFGDG 647
            PP P   P++GNL  L  + H+ +  L++ HGP++ LRLGF             + LK+HD     RP  +    +  + QDI   PYG   R LRK+S +  FS   +  +R++R+EE  ++ + L  A  +   V+L+Q L   V + + R   G R F +G
Sbjct:   27 PPSPLKLPVIGNLYQLRGLFHKCLHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLAPYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKLKEAALKKSSVDLSQTLFGLVGSIIFRSAFGQR-FDEG 189          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.082e-15
Identity = 45/130 (34.62%), Postives = 65/130 (50.00%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASA 551
            PPGP   PI+GNL  LG + H S   L+  HGP+M LR G              Q LK  D    +RP          N++DI F  YG  WR ++K+  + LF+ K    +R++R+EE  +L + L+ +
Sbjct:   31 PPGPTGLPIIGNLHQLGRLLHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNFKDIAFAQYGEDWREMKKLVGLELFNPKKHKFFRYIREEEGDLLVKKLSKS 160          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.846e-15
Identity = 56/168 (33.33%), Postives = 76/168 (45.24%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGG 656
            PPGP   P+VG L HL    P  ++  LA  +GP+M+LR G              + L+  D  F++RP    ++   Y   DI F PYG  WRMLRK+ +V L S K +     +R  E   L R +  A+ G +P  LA  L  C      +       FG   GG
Sbjct:   36 PPGPWNLPLVGGLLHLLRSQPQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNIEAAAGGKKPFTLATLLISCTNTFTAKA-----AFGQACGG 198          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.846e-15
Identity = 51/179 (28.49%), Postives = 88/179 (49.16%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNL------CVVNALGRVMLGFRVFGDGTGGSDPEADEF 680
            PPGP P PIVGNL  + P+  +     A+++GP++ + +G              + LK HD   ++R  N   +  + N QD+++  YGP +  +RK+ ++ LF+ K L+  R +R++E+  +  ++      P N A+ L L         N + R+  G R F +  G  D +  EF
Sbjct:   28 PPGPSPKPIVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKR-FMNAEGVVDEQGLEF 205          
BLAST of FC920203 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.846e-15
Identity = 55/158 (34.81%), Postives = 82/158 (51.90%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGP-LMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEM-AVLTRA-LASAGTEPVNLAQRLNLCVVNALGRVMLG 626
            P  P   PI+G+L  +G +P+ S+A LA  +GP LM LRLG                L+ +D  FS+RP +  +  I Y   D  F PYG  +R  RK+ +VHL +   +   R  R+EE+   L R   A+A  EPV++++ L+  V N + R + G
Sbjct:   69 PSPPMKLPIIGHLHLMGDIPYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVRGALDRVRRAAAAREPVDMSELLHSFVNNLVCRAVSG 226          
The following BLAST results are available for this feature:
BLAST of FC920203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
C71BU_ARATH9.786e-1734.11Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71DF_MENPI1.278e-1628.85Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71B6_ARATH1.669e-1632.12Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C99A2_ORYSJ2.180e-1632.93Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C98A2_SOYBN2.180e-1627.93Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C71BO_ARATH6.343e-1632.32Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71B8_ARATH1.082e-1534.62Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C99A3_ORYSJ1.846e-1533.33Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C98A3_ARATH1.846e-1528.49Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C71C4_MAIZE1.846e-1534.81Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC32005C11EF RVDevelop1 Citrus clementina cDNA clone C32005C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920203 ID=FC920203; Name=FC920203; organism=Citrus clementina; type=EST; length=685bp
GGCGACTACTCGTACCATTTCTACCCTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGA
ATGCCCTAGGGCGGGTGATGCTAGGCTTCAGAGTGTTCGGCGACGGTACC
GGAGGGAGCGACCCCGAGGCTGACGAGTTCAATCA
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