FC920205

Overview
NameFC920205
Unique NameFC920205
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length659
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6036 contig Ccv1_Contig6036:6..664. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.088e-29
Identity = 67/189 (35.45%), Postives = 102/189 (53.97%), Query Frame = 1
Query:  124 RVQAIASLSHSNGTIPAEFVRPEKE-----QPASATYHGPAPEIPTIDL------DDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 657
            RV+ +A    S  TIP E++RP+ E            +   P++PTIDL      ++ V+ +    + +A+ +WG+  + NHGI  +L+ K++  GK FF+LP E+KE Y+    +  +QGYG+KL     G+  W D+ FH V+P    +   WP  P  Y     EYAK +RE+  K+   LSLGLG
Sbjct:   10 RVETLAGSGIS--TIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLG 196          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.036e-28
Identity = 64/174 (36.78%), Postives = 95/174 (54.60%), Query Frame = 1
Query:  166 IPAEFVRPEKEQPASATYH-----GPAPEIPTIDLDD-PVQDRLVRS----IAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 657
            IP E+VRP++E                P++PTIDL +   +D+ +R     + +A+ EWG+  + NHGI  +LI +++  G+ FF+ P EEKE Y+      +VQGYG+KL     G+  W D+ FH  +P    +   WP NP  Y     EYAK +R +  K+ T LS+GLG
Sbjct:   23 IPKEYVRPQEELNGIGNIFEEEKKDEGPQVPTIDLKEIDSEDKEIREKCHQLKKAAMEWGVMHLVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLG 196          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.768e-28
Identity = 64/190 (33.68%), Postives = 99/190 (52.11%), Query Frame = 1
Query:  136 IASLSHSN-GTIPAEFVRPEKEQPASATYH-----GPAPEIPTIDLDD----------PVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 657
            + SLS S   +IP E++RP++E  +             P++PTIDL D           +++R    + +A+ EWG+  + NHGI  DLI +++  G+ FF LP EEKE Y+    +  + GYG+KL     G+  W D+ FH ++P    +   WP  P  Y     EY+  +R +  K+ + LSLGLG
Sbjct:    9 VESLSSSGIQSIPKEYIRPQEELTSIGNVFEEEKKDEGPQVPTIDLKDIESEDEVVRREIRERCREELKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPMEEKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLG 198          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26
Identity = 67/194 (34.54%), Postives = 101/194 (52.06%), Query Frame = 1
Query:  124 RVQAIASLSHSNGTIPAEFVRPEKEQPAS------ATYHG---PAPEIPTID----LDDPVQ----DRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGL 654
            RV+A++    S   IP E+VRP  E+         A  H     AP IP +D    LD   Q    D  V ++  A+ +WG+  +  HGIP++L+ +L+A G  FF LP ++KE Y+    A  +QGYG++L     G++ W D+LFH V P    ++  WP  PP Y A   ++ +  R++   L   LS+GL
Sbjct:   13 RVEALSLSGLS--AIPPEYVRPADERAGLGDAFDLARTHANDHTAPRIPVVDISPFLDSSSQQQQRDECVEAVRAAAADWGVMHIAGHGIPAELMDRLRAAGTAFFALPVQDKEAYANDPAAGRLQGYGSRLATNTCGQREWEDYLFHLVHPDGLADHALWPAYPPDYIAATRDFGRRTRDLASTLLAILSMGL 204          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.364e-19
Identity = 56/167 (33.53%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  163 TIPAEFVRPEKEQPASATYHGPAPEIPTIDLDDP------VQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLS 645
            T+ + FVR E E+P  A Y+  + EIP I L         V D + R I EA  +WGIFQV NHG+ S+LI ++  + +EFF LP EE   +      K   G+      + E  + W + + +  +P  + +Y  WP+ P  +R+V +EY++ +  +  KL   LS
Sbjct:   14 TLQSSFVRDEDERPKVA-YNDFSNEIPVISLTKESMKLAAVVDEICRKIVEACEDWGIFQVVNHGVDSNLISEMTRLAREFFALPPEENVRFDMSGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPLRTRDYSRWPDKPEGWRSVTQEYSEKLMGLACKLLEVLS 177          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.699e-19
Identity = 58/171 (33.92%), Postives = 90/171 (52.63%), Query Frame = 1
Query:  163 TIPAEFVRPEKEQPASATYHGPAPEIPTIDL----DDPVQDR--LVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 657
            T+ ++FVR E E+P  A Y+  + EIP I L    DD V  R  + R I EA  +WGIFQV +HGI  DLI ++  + ++FF LP EEK  +      K   G+      + E  + W + + +  +P  + +Y  WP+ P  +R++ E Y+  +  +  KL   LS  +G
Sbjct:   14 TLNSKFVRDEDERPKIA-YNKFSDEIPVISLAGIDDDSVDKRSQICRKIVEACEDWGIFQVVDHGIDIDLISEMTRLARQFFALPAEEKLRFDMTGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMG 181          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.825e-18
Identity = 60/185 (32.43%), Postives = 93/185 (50.27%), Query Frame = 1
Query:  112 MEVERVQAIASLSHSNGTIPAEFVRPEKEQPASATYHGPAPEIPTIDL---DDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 657
            M  E+ + + SL   +  + + FVR E E+P  A Y+  + +IP I L   D   +  + R I EA  +WGIFQV +HG+  DLI  +  + +EFF LP EEK  +      K      + LQ EV   + W + + +  +P +S +Y  WP+ P  +  V EEY+  +  +   L   LS  +G
Sbjct:    1 MVAEKPKTLTSLE-GDDKLNSNFVRDEDERPKVA-YNEFSNDIPVISLAGIDGEKRGEICRKIVEACEDWGIFQVVDHGVGDDLIADMTRLAREFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEV--VQDWREIVTYFSYPTNSRDYTRWPDKPEGWIKVTEEYSNKLMTLACTLLGVLSEAMG 181          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.301e-18
Identity = 58/186 (31.18%), Postives = 88/186 (47.31%), Query Frame = 1
Query:  112 MEVERVQAIASLSHSNGTIPAEFVRPEKEQPASATYHGPAPEIPTIDLDDPVQDRL----VRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 657
            + VE VQ +A     N  +P  +VRPE E            EIP IDL   +  +     +     A  +WG FQ+ NHG+  ++I K++   ++FF LP +EK  Y +  +   ++GYG       E K  W D  F    P    N RFWP +P S+R   E+Y+  +++V   L   ++  LG
Sbjct:   12 LPVENVQVLAGKELKN--LPNRYVRPELEHDDVVPIDNSL-EIPVIDLSRLLDQQYACDELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNG--MEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLG 192          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.127e-17
Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = 1
Query:  163 TIPAEFVRPEKEQPASATYHGPAPEIPTIDL---DDPVQDR---LVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 657
            T+  +FVR E E+P  A Y+  + EIP I L   DD    R   + R I +A  +WGIFQV +HGI S LI ++  + +EFF LP EEK  Y      +      T LQ   +    W + + +  +P ++ +Y  WP  P  +R+  E Y++ +  +  KL   LS  +G
Sbjct:   14 TLNLDFVRDEDERPKVA-YNQFSNEIPIISLAGLDDDSDGRRPEICRKIVKACEDWGIFQVVDHGIDSGLISEMTRLSREFFALPAEEKLEYDTTGGKRGGFTISTVLQG--DDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMG 181          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.127e-17
Identity = 55/179 (30.73%), Postives = 94/179 (52.51%), Query Frame = 1
Query:  136 IASLSHSNGTIPAEFVRPEKEQPASATYHGPAPEIPTIDLD--DPVQDR---LVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 657
            + S++H   T+  +FVR E E+P  A Y+  + EIP I L   D V+ R   + + I  A  +WGIFQ+ +HG+ ++LI ++  + +EFF LP EEK  +      K   G+      + E  + W + + +  +P    +Y  WP+ P ++R V ++Y+  +  +  KL   LS  +G
Sbjct:    7 LTSIAHEK-TLQQKFVRDEDERPKVA-YNDFSNEIPIISLAGIDEVEGRRGEICKKIVAACEDWGIFQIVDHGVDAELISEMTGLAREFFALPSEEKLRFDMSGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPIRHRDYSRWPDKPEAWREVTKKYSDELMGLACKLLGVLSEAMG 181          
The following BLAST results are available for this feature:
BLAST of FC920205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
LDOX_MALDO2.088e-2935.45Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
LDOX_PETHY1.036e-2836.78Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_VITVI1.768e-2833.68Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
LDOX_MAIZE2.161e-2634.54Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
FL3H_VITVI4.364e-1933.53Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
FL3H_PETCR5.699e-1933.92Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_DIACA4.825e-1832.43Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
NCS1_COPJA6.301e-1831.18S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
FNSI_PETCR3.127e-1733.92Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
FL3H_MALDO3.127e-1730.73Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32005D01EF RVDevelop1 Citrus clementina cDNA clone C32005D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920205 ID=FC920205; Name=FC920205; organism=Citrus clementina; type=EST; length=659bp
GGCAAGTGCGTAGCGTTACTGCGTCACAGTCGCAGGAAAGGCGCAAGCCA
AGAAAGAGAGAGGGAGAGAAGGAAAAGAAAAGTGGTGGGGTTTTGCTGGA
AAATAAAATTAATGGAGGTGGAGAGGGTCCAAGCCATTGCTTCCTTATCC
CATTCAAATGGCACAATTCCAGCAGAGTTCGTAAGACCCGAAAAAGAACA
GCCAGCAAGCGCAACGTACCACGGCCCCGCTCCTGAAATCCCCACGATCG
ATCTCGACGACCCCGTTCAAGACAGACTCGTACGTTCCATCGCGGAAGCC
AGCCGGGAGTGGGGGATTTTCCAGGTTACAAACCACGGGATACCTAGTGA
CCTCATCGGTAAACTGCAAGCCGTCGGCAAAGAATTTTTTGAGCTCCCTC
AGGAAGAGAAAGAAGTGTATTCTCGTCCGGCTGATGCAAAAGACGTGCAA
GGATACGGCACAAAGTTACAGAAAGAAGTCGAAGGAAAGAAATCTTGGGT
TGATCATCTCTTCCACAGGGTTTGGCCTCCGTCTTCTATCAACTACCGCT
TTTGGCCCAACAACCCTCCTTCTTACCGAGCGGTGAATGAGGAGTATGCA
AAGTACATGAGGGAGGTGGTGGATAAGTTGTTTACGTATCTTTCGTTGGG
ACTGGGTGT
back to top