FC920205

Overview
NameFC920205
Unique NameFC920205
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length659
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6036 contig Ccv1_Contig6036:6..664. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.084e-17
Identity = 55/170 (32.35%), Postives = 89/170 (52.35%), Query Frame = 1
Query:  163 TIPAEFVRPEKEQPASATYHGPAPEIPTIDL---DDPVQDR--LVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 657
            T+   F+R E E+P  A Y+  + EIP I L   DD    R  +   I +A  +WG+FQV +HG+ +++I ++    KEFF LP EEK  +      K      + LQ EV   + W + + +  +P  + +Y  WP+ P  + AV ++Y++ + E+  KL   LS  +G
Sbjct:   17 TLQTSFIRDEDERPKVA-YNQFSNEIPIISLEGIDDETGKRAEICDKIVKACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEV--VQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMG 183          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.188e-16
Identity = 52/167 (31.14%), Postives = 84/167 (50.30%), Query Frame = 1
Query:  172 AEFVRPEKEQPASATYHGPAPEIPTIDLD-----DPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 657
            ++FVR E E+P  A Y+  + EIP I L      D  +  + R I EA   WGIFQV +HG+ + L+  +  + ++FF LP EEK  +      K   G+      + E  + W + + +  +P  + +Y  WP+ P  +  V EEY++ +  +  KL   LS  +G
Sbjct:   16 SKFVRDEDERPKVA-YNEFSDEIPVISLAGIDDVDGKRGEICREIVEACENWGIFQVVDHGVDTSLVADMTRLARDFFALPPEEKLRFDMSGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPQGWAKVTEEYSEKLMGLACKLLEVLSEAMG 179          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.552e-16
Identity = 51/164 (31.10%), Postives = 84/164 (51.22%), Query Frame = 1
Query:  175 EFVRPEKEQPASATYHGPAPEIPTIDL---DDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 657
            +FVR E E+P    Y+  + EIP I L   D   +  +   I +A  +WGIFQV +HG+ + L+  +  + ++FF LP +EK  +      K   G+      + E  + W + + +  +P  + +Y  WP+ P  +RAV EEY+K +  +  KL   LS  +G
Sbjct:   18 KFVRDEDERP-KVPYNTFSNEIPVISLAGIDGCRRAEICDEIVKACEDWGIFQVVDHGVDTKLLSDMTGLARDFFHLPTQEKLRFDMTGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPIKARDYSRWPDKPNEWRAVTEEYSKVLMGLACKLLEVLSEAMG 178          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.647e-16
Identity = 51/167 (30.54%), Postives = 85/167 (50.90%), Query Frame = 1
Query:  172 AEFVRPEKEQPASATYHGPAPEIPTIDLD-----DPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 657
            ++FVR E E+P  A Y+  + EIP I L      D  +  + R I EA   WGIFQV +HG+ ++L+  +  + ++FF LP E+K  +      K   G+      + E  + W + + +  +P  + +Y  WP+ P  +  V EEY++ +  +  KL   LS  +G
Sbjct:   17 SKFVRDEDERPKVA-YNVFSDEIPVISLAGIDDVDGKRGEICRQIVEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMG 180          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.993e-15
Identity = 48/168 (28.57%), Postives = 79/168 (47.02%), Query Frame = 1
Query:  163 TIPAEFVRPEKEQPASATYHGPAPEIPTIDL----DDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGL 654
            T+P  +VR ++++           EIP ID+         D  V  +  A +EWG FQ+ NHGI S  + K+++  ++FF LP EEK+ + +  D  +++G+G       + K  W D  FH V P        +P  P  +R   E Y+  ++ V   L   ++  L
Sbjct:   28 TVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPD--EIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARAL 193          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.521e-15
Identity = 54/166 (32.53%), Postives = 80/166 (48.19%), Query Frame = 1
Query:  184 RPEKEQPASATYHGPAPEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQ-GYGTKLQKEVEGKK-------SWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 657
            R EK+ P          ++P IDL       LV+ I +A +++G+FQV NHG P +L+ +   V KEFF LP EEKE +    +A   +     K +  VEG++        W D L H   P        WP  P  YR V  +Y+  +R++  ++  Y+  GLG
Sbjct:   24 RAEKDVPVGN-------DVPIIDLQQH-HHLLVQQITKACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLG 181          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.478e-14
Identity = 49/167 (29.34%), Postives = 80/167 (47.90%), Query Frame = 1
Query:  163 TIPAEFVRPEKEQPASA--TYHGPAPEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 657
            T+   FVR E E+P  A   +    P I    +D   + ++   +A A  +WGIFQV +HG+ +DLI  +  + +EFF LP E+K  Y      K   G+      + E  + W + + +  +P  + +Y  WP  P  + AV E Y++ +  +   L   LS  +G
Sbjct:   19 TLRPSFVRDEDERPKVAHDRFSDAVPLISLHGIDGARRAQIRDRVAAACEDWGIFQVIDHGVDADLIADMTRLAREFFALPAEDKLRYDMSGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPVKARDYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAMG 183          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.167e-12
Identity = 49/167 (29.34%), Postives = 85/167 (50.90%), Query Frame = 1
Query:  163 TIPAEFVRP-EKEQPASATYHGPAPEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEK-EVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 657
            +IP  F+ P ++  PA+         +P ID+    +D + ++I ++ +E+G  QV NHGI   ++ ++ AV  EFF++P E+K E +S     ++    G+    E  G+K W+D +   ++P  S + + WP+ P   R V   Y    R V  ++   L  GLG
Sbjct:   14 SIPDSFLLPADRLHPATTDV-----SLPIIDMSRG-RDEVRQAILDSGKEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDKAEFFSEDRSERNKLFCGSAF--ETLGEKYWID-VLELLYPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLG 171          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.349e-11
Identity = 48/154 (31.17%), Postives = 72/154 (46.75%), Query Frame = 1
Query:  199 QPASATYHGPAPE-IPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINY--RFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLG 651
            +P+SA       E IP IDL +P    L   I +AS+ WG FQ+ NHGI   L+  ++++ K  F++P E K      +  K V GYG         KK W +     +   S  N+    WP++   Y  + +EY   M ++  +L  Y  LG
Sbjct:   35 RPSSAVSFDAVEESIPVIDLSNPDVTTL---IGDASKTWGAFQIANHGISQKLLDDIESLSKTLFDMPSERK--LEAASSDKGVSGYGEPRISPFFEKKMWSEGF--TIADDSYRNHFNTLWPHDHTKYCGIIQEYVDEMEKLASRLL-YCILG 180          
BLAST of FC920205 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11
Identity = 42/140 (30.00%), Postives = 66/140 (47.14%), Query Frame = 1
Query:  238 IPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 657
            +P IDL D     +   +  A   WG FQ+TNHG+PS L+  ++ +    F LP + K   +R  +   V GYG         KK W +  F  +  P     + WP++   Y  + EEY ++M+++  KL  +    LG
Sbjct:   50 LPLIDLSDI---HVATLVGHACTTWGAFQITNHGVPSRLLDDIEFLTGSLFRLPVQRKLKAARSENG--VSGYGVARIASFFNKKMWSEG-FTVIGSPLHDFRKLWPSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLG 183          
The following BLAST results are available for this feature:
BLAST of FC920205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
FL3H_PETHY4.084e-1732.35Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_MATIN1.188e-1631.14Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_CALCH1.552e-1631.10Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
FL3H_ARATH2.647e-1630.54Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
SRG1_ARATH4.993e-1528.57Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
HY6H_HYONI6.521e-1532.53Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
FL3H_HORVU2.478e-1429.34Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
IDS2_HORVU5.167e-1229.34Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
G3OX4_ARATH3.349e-1131.17Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
G3OX2_ARATH7.461e-1130.00Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC32005D01EF RVDevelop1 Citrus clementina cDNA clone C32005D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920205 ID=FC920205; Name=FC920205; organism=Citrus clementina; type=EST; length=659bp
GGCAAGTGCGTAGCGTTACTGCGTCACAGTCGCAGGAAAGGCGCAAGCCA
AGAAAGAGAGAGGGAGAGAAGGAAAAGAAAAGTGGTGGGGTTTTGCTGGA
AAATAAAATTAATGGAGGTGGAGAGGGTCCAAGCCATTGCTTCCTTATCC
CATTCAAATGGCACAATTCCAGCAGAGTTCGTAAGACCCGAAAAAGAACA
GCCAGCAAGCGCAACGTACCACGGCCCCGCTCCTGAAATCCCCACGATCG
ATCTCGACGACCCCGTTCAAGACAGACTCGTACGTTCCATCGCGGAAGCC
AGCCGGGAGTGGGGGATTTTCCAGGTTACAAACCACGGGATACCTAGTGA
CCTCATCGGTAAACTGCAAGCCGTCGGCAAAGAATTTTTTGAGCTCCCTC
AGGAAGAGAAAGAAGTGTATTCTCGTCCGGCTGATGCAAAAGACGTGCAA
GGATACGGCACAAAGTTACAGAAAGAAGTCGAAGGAAAGAAATCTTGGGT
TGATCATCTCTTCCACAGGGTTTGGCCTCCGTCTTCTATCAACTACCGCT
TTTGGCCCAACAACCCTCCTTCTTACCGAGCGGTGAATGAGGAGTATGCA
AAGTACATGAGGGAGGTGGTGGATAAGTTGTTTACGTATCTTTCGTTGGG
ACTGGGTGT
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