FC920211
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920211 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.871e-32 Identity = 79/180 (43.89%), Postives = 102/180 (56.67%), Query Frame = 2 Query: 122 RIAIGTPGEASHPDALKAALAEFFSMLIFVFAGQASGMAFSKLTDGGASTPAG-LISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIV 658 ++ +G GEAS PD + L E +FVF G + M T G ST G L + +L A + V + G +ISGGHVNPAVT VGGH+TL RS LY AQ+L S AC LL++ TGGL T AL+ GV VV E V TF L++ +YAT +DP+K L P+ G +V Sbjct: 3 KLTLGHRGEASEPDFFRGVLGELVLTFLFVFIGVGAAMTDGATTKG--STAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRK-LLPGAGPLLTGLLV 179
BLAST of FC920211 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.001e-31 Identity = 76/183 (41.53%), Postives = 103/183 (56.28%), Query Frame = 2 Query: 110 MPIYRIAIGTPGEASHPDALKAALAEFFSMLIFVFAGQASGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIV 658 +P+ ++ +G GEA P L+A E +FVF G AS + K GGA A + +A++A A + V + G ++SGGH+NPAVT VGGHITL RS LY AQL GS +ACLLL+ TGG T AL+ GV V E V TF L+ + AT +DP++ P+ G +V Sbjct: 4 LPMTKLELGHRGEAWEPGCLRAVAGELLFTFLFVFIGVASTITAGKAA-GGAGEAAAVTAAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLV 185
BLAST of FC920211 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.970e-31 Identity = 74/174 (42.53%), Postives = 107/174 (61.49%), Query Frame = 2 Query: 146 EASHPDA--LKAALAEFFSMLIFVFAGQASGMAFSKLTDGGASTP-AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIV 658 EA PD ++A LAE +FVF G ++ MA G + P A L + ++AHA A V V+ G ++SGGH+NPAVT G V GHIT LR++LY AQLL S +AC+LL++ +GG+ T AL +G+ +V E+++TF L++ YA +DP + + TI P+ G IV Sbjct: 16 EAPAPDVGCVRAVLAELVLTFLFVFTGVSASMAAGAGGKPGEAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDP-RSQVRTIGPLLTGLIV 188
BLAST of FC920211 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.467e-30 Identity = 74/173 (42.77%), Postives = 99/173 (57.23%), Query Frame = 2 Query: 143 GEASHPDALKAALAEFFSMLIFVFAGQASGMAFSKLTDGGASTP-AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIV 658 GE ++A LAE +FVF G A+ MA GA+ P A L ++A A A V V+ G ++SGGH+NPAVT GHIT RS LY AQLL S +AC+LL++ TGG+ T L SG+ +V EI++TF L++ VYAT +DP+ G P+ G IV Sbjct: 11 GEVVDAGCVRAVLAELVLTFVFVFTGVAATMAAGVPEVAGAAMPMAALAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPRSSVPG-FGPLLTGLIV 182
BLAST of FC920211 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.467e-30 Identity = 71/165 (43.03%), Postives = 101/165 (61.21%), Query Frame = 2 Query: 167 LKAALAEFFSMLIFVFAGQASGMAFSKLTDGGASTP-AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIV 658 ++A LAE +FVF G ++ MA G + P A L + ++AHA A V V+ G ++SGGH+NPAVT G V GHIT LR++LY AQLL S AC+LL+F +GG+ T AL G+S +V E+++TF L++ YA +DP + + I P+ G IV Sbjct: 23 VRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDP-RSQVRAIGPLLTGLIV 186
BLAST of FC920211 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 2.727e-29 Identity = 67/156 (42.95%), Postives = 97/156 (62.18%), Query Frame = 2 Query: 158 PDALKAALAEFFSMLIFVFAGQASGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLG 625 P AL+A AEFFS +FVF S ++ LT S + L++ ++A AF LF AV + A++SGGHVNPAVTF +GGHIT+ +I YW +Q+LGS ACL+L + + G ++ ++ + A + E V+TF +VYTV+ A DP+ G G Sbjct: 14 PPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFGLFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEMTGFGAGILEGVLTFMVVYTVH-VAGDPRGGGFG 168
BLAST of FC920211 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.954e-27 Identity = 66/165 (40.00%), Postives = 101/165 (61.21%), Query Frame = 2 Query: 161 DALKAALAEFFSMLIFVFAGQASGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFI 655 +AL+ ++EF S FV A S M+ KL G S P G++ ++A+A AL +V + N+SGGHVNPAVTF V G I++ ++ YW +Q++ SV+ACL+LK + + ++ ++ + A V E V+ F LVYTV+ TA DP++G + PI IGF+ Sbjct: 20 NALRCYVSEFISTFFFVLAAVGSVMSSRKLMAGDVSGPFGVLIPAIANALALSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVLEGVLAFVLVYTVF-TASDPRRGLPLAVGPIFIGFV 183
BLAST of FC920211 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.022e-24 Identity = 59/143 (41.26%), Postives = 88/143 (61.54%), Query Frame = 2 Query: 164 ALKAALAEFFSMLIFVFAGQASGMAFSKLTDGGASTPAG-LISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVY 589 +L++ LAEF S +FVF S ++ LT ++ AG L++ ++A AF LF AV + A++SGGHVNPAVTF +GG I + ++ YW +QLLG+ ACL L + G E ++ ++ + V E V+TF LVYTV+ Sbjct: 18 SLRSYLAEFISTFLFVFTAVGSAISARMLTTPDVTSSAGPLVATAVAQAFGLFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAGEEVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVH 160
BLAST of FC920211 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.217e-22 Identity = 64/177 (36.16%), Postives = 100/177 (56.50%), Query Frame = 2 Query: 170 KAALAEFFSMLIFVFAGQASGMAFSKLTDGGASTP------AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKK----GNLGTIAPIAIGFIV 658 +A +AEF + L+F++ A+ + + TD AS P G++ + A +F+ V A ISGGH+NPAVTFG F+ ++L+R++LY AQ LG++ L+K G A +S+G S+ + EI+ TF LVYTV+ +A DPK+ ++ +AP+ IGF V Sbjct: 41 RAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAV 216
BLAST of FC920211 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.394e-22 Identity = 65/181 (35.91%), Postives = 102/181 (56.35%), Query Frame = 2 Query: 170 KAALAEFFSMLIFVFAGQASGMAFSKLTDGGASTP------AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFA--------LSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKK----GNLGTIAPIAIGFIV 658 +A +AEF + L+F++ A+ + + TD AS P G++ + A +F+ V A ISGGH+NPAVTFG F+ ++L+R++LY IAQ LG++ L+K G +++ + LS G S + EI+ TF LVYTV+ +A DPK+ ++ +AP+ IGF V Sbjct: 41 RAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVK----GFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAV 216 The following BLAST results are available for this feature:
BLAST of FC920211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920211 ID=FC920211; Name=FC920211; organism=Citrus clementina; type=EST; length=658bpback to top |