FC920214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: PDK2_MOUSE ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial OS=Mus musculus GN=Pdk2 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.365e-22 Identity = 82/238 (34.45%), Postives = 118/238 (49.58%), Query Frame = 2 Query: 5 VRKQKPDAAMA-AKKLSETFSKSLIEEVGRWGCMKQTGVTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELH----NPNPPPHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPEFYI 694 VR +A++A A K E FSK + ++++ ++FGS + S FL +ELP+R+A E+ LP + P+V V+ WY+ S D+ F D + D R FT + I+ RHN+VVP MA G+ + K V I FLDRFY+SRI IRMLI QH + NP P H IG ID S V ++A + A +C + Y ++P+ I Sbjct: 4 VRALLKNASLAGAPKYIEHFSK-----------FSPSPLSMKQFLDFGSSNACEKT--SFTFLRQELPVRLANIMKEINLLPDRVLGTPSVQLVQSWYVQSLLDIMEFLD-KDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSN--QNIQYFLDRFYLSRISIRMLINQHTLIFDGSTNPAHPKH-IGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEI 224
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: PDK2_HUMAN ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial OS=Homo sapiens GN=PDK2 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 5.269e-22 Identity = 71/200 (35.50%), Postives = 104/200 (52.00%), Query Frame = 2 Query: 116 VTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELH----NPNPPPHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPEFYI 694 ++++ ++FGS + S FL +ELP+R+A E+ LP + P+V V+ WY+ S D+ F D + D R FT + I+ RHN+VVP MA G+ + K V I FLDRFY+SRI IRMLI QH + NP P H IG ID + V ++A + A +C + Y ++P+ I Sbjct: 31 LSMKQFLDFGSSNACEKT--SFTFLRQELPVRLANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLD-KDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSN--QNIQYFLDRFYLSRISIRMLINQHTLIFDGSTNPAHPKH-IGSIDPNCNVSEVVKDAYDMAKLLCDKYYMASPDLEI 224
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: PDK1_RAT ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1, mitochondrial OS=Rattus norvegicus GN=Pdk1 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.882e-22 Identity = 75/233 (32.19%), Postives = 119/233 (51.07%), Query Frame = 2 Query: 8 RKQKPDAAMAAKKLSETFSKSLIEEVGRWGCMKQTGVTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELH----NPNPPPHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPE 685 R D+A + SE+ ++ R+ + ++++ ++FGS + S FL +ELP+R+A E+ LP L P+V V+ WY+ S ++L F D +S D + +FT + I+ RHN+V+P MA G+ + K+ V + FLDRFYMSRI IRML+ QH L +P+ H IG I+ V V ++ E+A +C Y ++PE Sbjct: 24 RSLASDSASGSGPASESGVPGQVDFYARFS---PSPLSMKQFLDFGSVNACEKT--SFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQELLDFKD-KSAEDAKTIYEFTDTVIRIRNRHNDVIPTMAQGVTEYKESFGVDPVTS--QNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGSPSHRKH-IGSINPNCDVVEVIKDGYENARRLCDLYYVNSPE 247
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: PDK1_MOUSE ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1, mitochondrial OS=Mus musculus GN=Pdk1 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.988e-22 Identity = 69/197 (35.03%), Postives = 106/197 (53.81%), Query Frame = 2 Query: 116 VTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELH----NPNPPPHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPE 685 ++++ ++FGS + S FL +ELP+R+A E+ LP L P+V V+ WY+ S ++L F D +S D + +FT + I+ RHN+V+P MA G+ + K+ V + FLDRFYMSRI IRML+ QH L +P+ H IG I+ V V ++ E+A +C Y ++PE Sbjct: 57 LSMKQFLDFGSVNACEKT--SFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQELLDFKD-KSAEDAKTIYEFTDTVIRIRNRHNDVIPTMAQGVTEYKESFGVDPVTS--QNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGSPSHRKH-IGSINPNCDVVEVIKDGYENARRLCDLYYVNSPE 247
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: PDK4_HUMAN ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4, mitochondrial OS=Homo sapiens GN=PDK4 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.002e-21 Identity = 68/207 (32.85%), Postives = 110/207 (53.14%), Query Frame = 2 Query: 80 EVGRWGCMKQTGVTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELHNPNPP--PHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPE 685 EV + + ++++ +++FGS+ + S FL +ELP+R+A E++ LP L +V V+ WY+ S DL F + +S D++ DF + ++ RH+NVVP MA G+ + K V + FLDRFYM+RI RML+ QH+ + + + P IG ID V V ++A E + +C + Y S+PE Sbjct: 23 EVEHFSRYSPSPLSMKQLLDFGSENACERT--SFAFLRQELPVRLANILKEIDILPTQLVNTSSVQLVKSWYIQSLMDLVEFHE-KSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYKDACTVDPVTN--QNLQYFLDRFYMNRISTRMLMNQHILIFSDSQTGNPSHIGSIDPNCDVVAVVQDAFECSRMLCDQYYLSSPE 224
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: PDK1_HUMAN ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1, mitochondrial OS=Homo sapiens GN=PDK1 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.002e-21 Identity = 69/199 (34.67%), Postives = 107/199 (53.77%), Query Frame = 2 Query: 116 VTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELH------NPNPPPHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPE 685 ++++ ++FGS + S FL +ELP+R+A E+ LP L P+V V+ WY+ S ++L F D +S D + DFT + I+ RHN+V+P MA G+ + K+ V + FLDRFYMSRI IRML+ QH L +P+ H IG I+ + + V ++ E+A +C Y ++PE Sbjct: 57 LSMKQFLDFGSVNACEKT--SFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQELLDFKD-KSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFGVDPVTS--QNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKH-IGSINPNCNVLEVIKDGYENARRLCDLYYINSPE 249
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: PDK4_SPETR ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4, mitochondrial OS=Spermophilus tridecemlineatus GN=PDK4 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.615e-21 Identity = 65/195 (33.33%), Postives = 107/195 (54.87%), Query Frame = 2 Query: 116 VTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELHNPNPP--PHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPE 685 ++++ +++FGS + S FL +ELP+R+A E++ LP L+ +V V+ WY+ S +L F + +S D++ DF + ++ RH+NVVP MA G+ + K V + FLDRFYM+RI RML+ QH+ + + + P IG ID K V V ++A E + +C + Y ++PE Sbjct: 35 LSMKQLLDFGSDNACERTSFS--FLRQELPVRLANILKEIDVLPDRLTNTSSVQLVKSWYIQSLMELVEFHE-KSPEDQKNLSDFVDTLIKVRNRHHNVVPTMAQGILEYKDTCTVDPVTN--QSLQYFLDRFYMNRISTRMLMNQHILIFSDSQTGNPSHIGSIDPKCDVVAVIQDAFESSKMLCDQYYLTSPE 224
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: PDK4_RHIFE ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4, mitochondrial OS=Rhinolophus ferrumequinum GN=PDK4 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.460e-21 Identity = 66/207 (31.88%), Postives = 111/207 (53.62%), Query Frame = 2 Query: 80 EVGRWGCMKQTGVTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELHNPNPP--PHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAPE 685 EV + + ++++ +++FGS+ + S+ FL +ELP+R+A E++ LP L +V V+ WY+ S +L F + RS D++ DF + ++ RH+NVVP MA G+ + K V + FLDRFYM+RI RML+ QH+ + + + P IG ID + V ++A E + +C + Y ++PE Sbjct: 23 EVEHFSRYSPSPLSMKQLLDFGSENACERT--SSAFLRQELPVRLANILKEIDILPDRLVNTSSVQLVKSWYIQSLMELVEFHE-RSPDDQKVLSDFVDTLITVRNRHHNVVPTMAQGIIEYKDSCTVDPVTN--QNLQYFLDRFYMNRISTRMLMNQHILIFSDSQTGNPSHIGSIDPNCNVAAVVQDAFECSRMLCDQYYLTSPE 224
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: PDK_ASCSU ([Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Ascaris suum PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.608e-21 Identity = 74/223 (33.18%), Postives = 112/223 (50.22%), Query Frame = 2 Query: 41 KKLSETFSKSLIEEVGRWGCMKQTGVTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSF------PDIRSTSDERDFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELHN---PNPPPHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAP 682 ++L F+ ++ ++ + + + +T++ ++FG T K+ + FL EL +R+A E+ LP L + P+ V +WY +SF DL F PDI S F ++ I RH+ VV MA GL +L++ I E I FLDRFY++RI IRML QH+ + P P H IG ID V +A E+A +C R Y +AP Sbjct: 5 RRLLGPFTSAIARKLEHYSQFQPSSLTIQQYLDFGQTGTMKSSFL---FLKNELLVRLANIMQEISLLPPTLLKMPSRRLVSNWYCESFEDLLQFEHAQVEPDIMS-----KFNDQLQTILKRHSRVVETMAEGLIELRESEGVDIASE--RGIQYFLDRFYINRISIRMLQNQHLVVFGVVLPESPRH-IGCIDPGCDVESVVHDAYENARFLCERYYLTAP 216
BLAST of FC920214 vs. ExPASy Swiss-Prot
Match: PDHK2_CAEEL (Probable [pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Caenorhabditis elegans GN=pdhk-2 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.435e-19 Identity = 72/219 (32.88%), Postives = 110/219 (50.23%), Query Frame = 2 Query: 38 AKKLSETFSKSLIEEVGRWGCMKQTGVTLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDE-RDFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQHVELHN---PNPPPHCIGYIDTKMSPVXVARNASEHAHCVCLREYGSAP 682 ++KL F SL +++ + + + +T++ ++FG T N S FL EL +R+A E LP L + P+ V +WY +SF DL F S+ ++ F + + RH +VV MA GL +L++ I E I FLDRFY++RI IRML QH+ + P P H +G ID V +A E+A +C R Y ++P Sbjct: 4 SRKLLGPFVGSLAKKLDYYSQFQPSSLTIQQYLDFGRIGTSAN---SYTFLKNELLVRLANIMQEFTLLPPKLLQMPSSKMVSNWYAESFEDLLLFEASDSSPEQVARFNDQLTVVLKRHAHVVETMAEGLIELRESDGVDIASE--KGIQYFLDRFYINRISIRMLQNQHLVVFGNVLPESPRH-VGCIDPACDVESVVYDAFENARFLCDRYYLTSP 216 The following BLAST results are available for this feature:
BLAST of FC920214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920214 ID=FC920214; Name=FC920214; organism=Citrus clementina; type=EST; length=744bpback to top |