FC920219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBA_AJECA (Tubulin alpha chain (Fragment) OS=Ajellomyces capsulata GN=TUB1 PE=3 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 5.384e-74 Identity = 120/193 (62.18%), Postives = 152/193 (78.76%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 MRE +S+++GQAG Q+ N+CWELYCLEHGIQPDG + ++ D FNTFFSETG GK+VPR ++ DLEP V+DEVRTG YR LFHPEQ+I+GKEDA+NN+ARGHYT+GKE++D CLD++R++ADNC+GLQGFLVFH+ VDYGKK+KL F VYP+PQ +TSVVEPYNS+L+TH+ Sbjct: 1 MREVVSLNVGQAGGQIANSCWELYCLEHGIQPDGYLTEERKAADPDQGFNTFFSETGQGKYVPRTIYCDLEPNVVDEVRTGPYRALFHPEQMITGKEDASNNYARGHYTVGKEMIDQCLDKVRRVADNCSGLQGFLVFHSFGGGQGSGFGALLMERLSVDYGKKTKLEFCVYPAPQNATSVVEPYNSILTTHT 193 HSP 2 Score: 28.4906 bits (62), Expect = 5.384e-74 Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 631 SVRHTDVSVLLDNESIYDI 687 ++ H+DV ++DNE+IYDI Sbjct: 194 TLEHSDVQFMVDNEAIYDI 212
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBA2_NEUCR (Tubulin alpha-B chain OS=Neurospora crassa GN=tba-2 PE=2 SV=2) HSP 1 Score: 270.011 bits (689), Expect = 2.031e-73 Identity = 122/193 (63.21%), Postives = 151/193 (78.24%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 MRE IS+++GQAG Q+ N+CWELYCLEHGIQPDG + ++ D F+TFFSETG GK+VPR ++ DLEP VIDEVRTGAYR LFHPE +ISGKEDA+NN+ARGHYT+GKE++D LD++R++ADNC+GLQGFLVFH+ VDYGKKSKL F VYP+PQ +TSVVEPYNS+L+TH+ Sbjct: 1 MREIISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAADPDHGFSTFFSETGNGKYVPRTIYADLEPNVIDEVRTGAYRGLFHPEHMISGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATSVVEPYNSILTTHT 193 HSP 2 Score: 27.7202 bits (60), Expect = 2.031e-73 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 631 SVRHTDVSVLLDNESIYDI 687 ++ H D S ++DNE+IYDI Sbjct: 194 TLEHADCSFMVDNEAIYDI 212
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBA_DICDI (Tubulin alpha chain OS=Dictyostelium discoideum GN=tubA PE=1 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 2.648e-73 Identity = 133/198 (67.17%), Postives = 154/198 (77.78%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFN----TFFSETGAGKHV-PRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDY-GKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 RE ISIHIGQAG+QVGN+CWELYCLEHGI+ DG + +D+ + N TFFSE+ GK V PRA+FLDLEPTVIDE+RTG Y+ LFHPEQLI+GKEDAANN+ARGHYT+GKE++D+C+DRIR+LAD C GLQGFLVFH+V +DY GKKSKL F VYPSPQVSTSVVEPYNSVLSTHS Sbjct: 3 REIISIHIGQAGVQVGNSCWELYCLEHGIERDGSIPADRKQSSDVNNLNKDLGTFFSESTNGKKVVPRAIFLDLEPTVIDEIRTGDYKNLFHPEQLITGKEDAANNYARGHYTVGKELIDVCVDRIRRLADQCDGLQGFLVFHSVGGGTGSGFGSLLLQKLALDYGGKKSKLDFCVYPSPQVSTSVVEPYNSVLSTHS 200 HSP 2 Score: 31.9574 bits (71), Expect = 2.648e-73 Identity = 15/22 (68.18%), Postives = 19/22 (86.36%), Query Frame = 1 Query: 622 HSLSVRHTDVSVLLDNESIYDI 687 HSL + HTDVS +LDNE+IY+I Sbjct: 199 HSL-LEHTDVSFMLDNEAIYNI 219
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBA_MYCGR (Tubulin alpha chain OS=Mycosphaerella graminicola PE=3 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 5.875e-73 Identity = 120/193 (62.18%), Postives = 150/193 (77.72%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 MRE IS+++GQAG Q+ N+CWELYCLEHGIQPDG + ++ DD F+TFFSETG GK+VPR ++ DLEP V+DEVRTG YR LFHPE +I+GKEDA+NN+ARGHYT+GKE++D LD++R +ADNC+GLQGFLVFH+ VDYGKK KL F VYP+PQV+TSVVEPYNS+L+TH+ Sbjct: 1 MREVISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAAEDDDGFSTFFSETGNGKYVPRTIYADLEPNVVDEVRTGTYRSLFHPELMITGKEDASNNYARGHYTVGKELIDQVLDKVRHVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKCKLEFCVYPAPQVATSVVEPYNSILTTHT 193 HSP 2 Score: 28.1054 bits (61), Expect = 5.875e-73 Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 631 SVRHTDVSVLLDNESIYDI 687 ++ H+D S ++DNE+IYDI Sbjct: 194 TLEHSDCSFMVDNEAIYDI 212
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBA2_SCHPO (Tubulin alpha-2 chain OS=Schizosaccharomyces pombe GN=tub1 PE=1 SV=2) HSP 1 Score: 271.552 bits (693), Expect = 2.851e-72 Identity = 126/193 (65.28%), Postives = 153/193 (79.27%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 MRE ISIH+GQAG Q+GNACWELYCLEHGIQP+G M + D F+TFFSETG GK+VPR++++DLEP VID+VRTG YR LFHPEQLI+GKEDA+NN+ARGHYT+GKE+VD D+IR++ADNC+GLQGFLVFH+ ++Y KKSKL F+VYP+PQVSTSVVEPYNSVL+TH+ Sbjct: 1 MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGKYVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTDKIRRIADNCSGLQGFLVFHSFGGGTGSGFGALLLERLAMEYTKKSKLQFSVYPAPQVSTSVVEPYNSVLTTHA 193
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBA1_EMENI (Tubulin alpha-1 chain OS=Emericella nidulans GN=tubA PE=3 SV=2) HSP 1 Score: 264.233 bits (674), Expect = 8.362e-72 Identity = 119/193 (61.66%), Postives = 150/193 (77.72%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 MRE IS+++GQAG Q+ N+CWELYCLEHGIQPDG + ++ D F+TFFSETG GK+VPR ++ DLEP V+DEVRTG YR LFHPE LI+GKEDA+NN+ARGHYT+GKE++D LD++R++AD+C+GLQGFLVFH+ VDYGKKSKL F VYP+PQ +TSVVEPYNS+L+TH+ Sbjct: 1 MREVISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKKEDPDHGFSTFFSETGQGKYVPRTIYADLEPNVVDEVRTGTYRSLFHPENLITGKEDASNNYARGHYTVGKEMIDQVLDKVRRMADSCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQNATSVVEPYNSILTTHT 193 HSP 2 Score: 28.1054 bits (61), Expect = 8.362e-72 Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 631 SVRHTDVSVLLDNESIYDI 687 ++ H+D S ++DNE+IYDI Sbjct: 194 TLEHSDCSFMVDNEAIYDI 212
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBA2_CHICK (Tubulin alpha-2 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 5.376e-71 Identity = 124/193 (64.25%), Postives = 150/193 (77.72%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 MRECIS+HIGQAG+Q+GNACWEL+CLEH IQPDG + DD+F TFF ET K+VPRA+ +DLEPTV+DEVRTG YR LFHPEQLI+GKEDAANN+ARGHYT+GK+ VD+ DRIRKLAD+C+GLQGFL+FH+ V+YGKKSKL F +YP+PQ S++VVEPYNSVL+TH+ Sbjct: 1 MRECISVHIGQAGVQIGNACWELFCLEHSIQPDGTFSDPPS---SDDSFATFFRETSMSKYVPRAIMVDLEPTVVDEVRTGTYRHLFHPEQLITGKEDAANNYARGHYTVGKDKVDMVSDRIRKLADSCSGLQGFLIFHSFGGGTGSGFTSLLMERLSVEYGKKSKLEFAIYPAPQASSAVVEPYNSVLTTHT 190
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 2.639e-70 Identity = 119/193 (61.66%), Postives = 150/193 (77.72%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 MRE IS+++GQAG Q+ N+CWELYCLEHGIQPDG + ++ D F+TFFSETG GK+VPR ++ DLEP VIDEVRTGAYR LFHPE +ISGKEDA+NN+ARGHYT+GKE++D LD++R++ADNC+GLQGFLVFH+ VDYGKKSKL F VYP+PQ +TSVVEPY++ L+T++ Sbjct: 1 MREIISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAADPDHGFSTFFSETGNGKYVPRTIYADLEPNVIDEVRTGAYRGLFHPEHMISGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATSVVEPYHNFLTTNT 193 HSP 2 Score: 24.6386 bits (52), Expect = 2.639e-70 Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 631 SVRHTDVSVLLDNESIYDI 687 ++ D S ++DNE+IYDI Sbjct: 194 TLEQADCSFMVDNEAIYDI 212
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBA_ASHGO (Tubulin alpha chain OS=Ashbya gossypii GN=TUB1 PE=3 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 3.442e-70 Identity = 127/195 (65.13%), Postives = 155/195 (79.49%), Query Frame = 2 Query: 53 MRECISIH-IGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVG-GGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 MRE IS++ +GQAG Q+GNACWELY LEHGI+PDG + T GG++ F+TFF+ETG+GK VPRAV++DLEP VIDEVRTGAYR+LFHPEQLISGKEDAANN+ARGHYT+G+E++D LDRIRK++D C GLQGFL H++ +DYGKKSKL F VYP+PQVSTSVVEPYN+VL+TH+ Sbjct: 1 MREVISVNAVGQAGCQIGNACWELYSLEHGIRPDGYLQEGLTKPKGGEEGFSTFFNETGSGKFVPRAVYVDLEPNVIDEVRTGAYRELFHPEQLISGKEDAANNYARGHYTVGRELLDDILDRIRKISDQCDGLQGFLFTHSLGGGTGSGLGSLLLEQLSIDYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTHT 195 HSP 2 Score: 23.8682 bits (50), Expect = 3.442e-70 Identity = 7/19 (36.84%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 631 SVRHTDVSVLLDNESIYDI 687 ++ H D + ++DNE+IY++ Sbjct: 196 TLEHADCTFMVDNEAIYEM 214
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBAA_SCHCO (Tubulin alpha-1A chain OS=Schizophyllum commune GN=TUB-1A PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 3.442e-70 Identity = 118/193 (61.14%), Postives = 151/193 (78.24%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 MRE +SIH+GQAG+Q+GNACWELY +EHG+ PDG+ LSD + DD F+TFFSET +GK+VPR++++DLEP VIDEVR G YR LFHPE +I+GKEDAA+N+ARGHYTIGKE +D+ +D++R+L DNC GLQGF VFH+ DYGKKSKL F+VYP+P +++SVVEPYNSVL+TH+ Sbjct: 1 MREVVSIHVGQAGVQIGNACWELYTIEHGLSPDGR-LSDDSPSKHDDGFSTFFSETSSGKYVPRSLYVDLEPNVIDEVRNGPYRSLFHPETMITGKEDAASNYARGHYTIGKEQIDVVMDKVRRLVDNCNGLQGFFVFHSFGGGTGSGFGALILERLSTDYGKKSKLEFSVYPAPTLASSVVEPYNSVLTTHT 192 HSP 2 Score: 28.1054 bits (61), Expect = 3.442e-70 Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 631 SVRHTDVSVLLDNESIYDI 687 ++ H+D S ++DNE+IYDI Sbjct: 193 TLEHSDCSFMVDNEAIYDI 211 The following BLAST results are available for this feature:
BLAST of FC920219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 413
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920219 ID=FC920219; Name=FC920219; organism=Citrus clementina; type=EST; length=688bpback to top |