FC920219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBA1_SCHPO (Tubulin alpha-1 chain OS=Schizosaccharomyces pombe GN=nda2 PE=2 SV=2) HSP 1 Score: 264.233 bits (674), Expect = 4.551e-70 Identity = 122/197 (61.93%), Postives = 153/197 (77.66%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGD----DAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 MRE IS+H+GQAG+Q+GNACWELYCLEHGI PDG + V + D F TFFSETG GK VPR++++DLEP VID+VRTG Y+ LFHPEQ+++GKEDA+NN+ARGHYT+GKE++D L+RIR++ADNC+GLQGFLVFH+ ++YGKKS L F+VYP+PQVSTSVVEPYNSVL+TH+ Sbjct: 1 MREVISVHVGQAGVQIGNACWELYCLEHGIGPDGFPTENSEVHKNNSYLNDGFGTFFSETGQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMIDSVLERIRRMADNCSGLQGFLVFHSFGGGTGSGLGALLLERLNMEYGKKSNLQFSVYPAPQVSTSVVEPYNSVLTTHA 197
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBA_CANAL (Tubulin alpha chain OS=Candida albicans GN=TUB1 PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.208e-69 Identity = 122/194 (62.89%), Postives = 152/194 (78.35%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSD-KTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 MRE ISI++GQAG Q+GNACWELY EHGI+PDG + GG++ F+TFFSETG+GK+VPRA+++DLEP VIDEVRTG Y+ LFHPEQLI+GKEDAANN+ARGHYT+G+EI+D LDR+R+++D C GLQGFL H++ +DYGKKSKL F VYP+PQVSTSVVEPYN+VL+TH+ Sbjct: 1 MREVISINVGQAGCQIGNACWELYSQEHGIRPDGYLQEGLDRPKGGEEGFSTFFSETGSGKYVPRALYVDLEPNVIDEVRTGVYKDLFHPEQLIAGKEDAANNYARGHYTVGREILDDILDRVRRMSDQCDGLQGFLFTHSLGGGTGSGLGSLLLEQLSLDYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTHT 194 HSP 2 Score: 25.409 bits (54), Expect = 2.208e-69 Identity = 8/19 (42.11%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 631 SVRHTDVSVLLDNESIYDI 687 ++ H D + ++DNE+IYD+ Sbjct: 195 TLEHADCTFMVDNEAIYDM 213
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBA1_YEAST (Tubulin alpha-1 chain OS=Saccharomyces cerevisiae GN=TUB1 PE=1 SV=2) HSP 1 Score: 255.758 bits (652), Expect = 1.847e-68 Identity = 124/194 (63.92%), Postives = 148/194 (76.29%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVG-GGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 MRE ISI++GQAG Q+GNACWELY LEHGI+PDG + + GG++ F+TFF ETG GK VPRA+++DLEP VIDEVR G Y+ LFHPEQLISGKEDAANN+ARGHYT+G+EI+ LDRIRKLAD C GLQGFL H++ +YGKKSKL F VYP+PQVSTSVVEPYN+VL+TH+ Sbjct: 1 MREVISINVGQAGCQIGNACWELYSLEHGIKPDGHLEDGLSKPKGGEEGFSTFFHETGYGKFVPRAIYVDLEPNVIDEVRNGPYKDLFHPEQLISGKEDAANNYARGHYTVGREILGDVLDRIRKLADQCDGLQGFLFTHSLGGGTGSGLGSLLLEELSAEYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTHT 194 HSP 2 Score: 25.409 bits (54), Expect = 1.847e-68 Identity = 8/19 (42.11%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 631 SVRHTDVSVLLDNESIYDI 687 ++ H D + ++DNE+IYD+ Sbjct: 195 TLEHADCTFMVDNEAIYDM 213
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBAB_SCHCO (Tubulin alpha-1B chain OS=Schizophyllum commune GN=TUB-1B PE=3 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 3.141e-68 Identity = 114/193 (59.07%), Postives = 148/193 (76.68%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 MRE IS+H+GQAG+Q+GNACWELY LEHG+ PDG+++ D D+ +TFFSETG GKHVPR +++DLEP VID+V+ G YR LFHPE +I+GKEDAANN+ARGHYT+GKE++D +D++R+LADNC+G QG VFH+ DYGKK+KL F VYP+PQ+S+SVVEPYNS+L+TH+ Sbjct: 1 MREVISVHVGQAGVQIGNACWELYTLEHGLSPDGRLMDDSP--SKHDSGSTFFSETGQGKHVPRRLYVDLEPGVIDDVKNGPYRSLFHPETMITGKEDAANNYARGHYTVGKELIDPVMDKLRRLADNCSGRQGLFVFHSFGGGTGSGFGALLLERLSTDYGKKAKLEFCVYPAPQLSSSVVEPYNSLLTTHT 191 HSP 2 Score: 28.1054 bits (61), Expect = 3.141e-68 Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 631 SVRHTDVSVLLDNESIYDI 687 ++ H+D S ++DNE+IYDI Sbjct: 192 TLEHSDCSFMVDNEAIYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBAL3_HUMAN (Tubulin alpha chain-like 3 OS=Homo sapiens GN=TUBAL3 PE=1 SV=2) HSP 1 Score: 251.136 bits (640), Expect = 9.084e-68 Identity = 119/200 (59.50%), Postives = 151/200 (75.50%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDG-------QMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 MREC+SIHIGQAGIQ+G+ACWELYCLEHGIQP+G L + + + +F+TFF ET AGKHVPRA+F+DLEPTVID +RTG +R LFHPEQL+SGKEDAANN+ARG Y++G E++DL L+R RKLA+ C GLQGFL+F + +Y +K+KL F+VYP+P++ST+VVEPYNSVL+THS Sbjct: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFFCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSEVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYPAPRISTAVVEPYNSVLTTHS 200 HSP 2 Score: 27.7202 bits (60), Expect = 9.084e-68 Identity = 9/19 (47.37%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 631 SVRHTDVSVLLDNESIYDI 687 + HTD + ++DNE++YDI Sbjct: 201 TTEHTDCTFMVDNEAVYDI 219
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBA8_CAEEL (Tubulin alpha-8 chain OS=Caenorhabditis elegans GN=tba-8 PE=2 SV=2) HSP 1 Score: 253.832 bits (647), Expect = 2.627e-67 Identity = 117/192 (60.94%), Postives = 146/192 (76.04%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 REC+SIHIGQAG Q+GNACWELYC+EHG+ G L ++ + FFSE+ GKHVPRA+++DLEPTV+DE+R G Y LFHP+Q+I+GKEDAANN+ARGHYTIGKE++D+ LDRIRK +NC GLQGFLVFH+ V++GKKSKL F+VYP+PQVSTSVVEPYNS+L+TH+ Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAG-FLKEEEKNKKQQSLQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHT 196 HSP 2 Score: 23.483 bits (49), Expect = 2.627e-67 Identity = 8/15 (53.33%), Postives = 13/15 (86.67%), Query Frame = 1 Query: 643 TDVSVLLDNESIYDI 687 +D S ++DNE+IYD+ Sbjct: 201 SDCSFMVDNEAIYDL 215
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 3.425e-67 Identity = 120/194 (61.86%), Postives = 149/194 (76.80%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVG-GGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 MRE ISI++GQAG Q+GNACWELY LEHGI+ DG + + GG++ F+TFF ETG GK VPRA+++DLEP VIDEVRTG +++LFHPEQLI+GKEDAANN+ARGHYT+G+EIVD +RIRK+AD C GLQGFL H++ +YGKKSKL F VYP+PQ+STSVVEPYN+VL+TH+ Sbjct: 1 MREVISINVGQAGCQIGNACWELYSLEHGIKEDGHLEDGLSKPKGGEEGFSTFFHETGYGKFVPRAIYVDLEPNVIDEVRTGRFKELFHPEQLINGKEDAANNYARGHYTVGREIVDEVEERIRKMADQCDGLQGFLFTHSLGGGTGSGLGSLLLENLSYEYGKKSKLEFAVYPAPQLSTSVVEPYNTVLTTHT 194 HSP 2 Score: 26.5646 bits (57), Expect = 3.425e-67 Identity = 9/19 (47.37%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 631 SVRHTDVSVLLDNESIYDI 687 ++ H D + ++DNE+IYDI Sbjct: 195 TLEHADCTFMVDNEAIYDI 213
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBA2_EMENI (Tubulin alpha-2 chain OS=Emericella nidulans GN=tubB PE=3 SV=2) HSP 1 Score: 249.21 bits (635), Expect = 1.684e-66 Identity = 120/196 (61.22%), Postives = 150/196 (76.53%), Query Frame = 2 Query: 59 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDD-----AFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 E IHIGQAG Q+GN+ WELY LEHG+ DG++ +K G+D +F TFF+ETG+GK+VPR++F+DL+P+ IDE+RTG YRQLFHPEQLISGKEDAANN+ARGHYT+GKE+VD +DR+R+L+DNC+ LQGFLVFH+ +YGKKSKL F VYPSP+VST+VVEPYN+VLSTHS Sbjct: 4 EVCHIHIGQAGTQLGNSAWELYLLEHGLGADGRLDPEK----GEDINAGGSFETFFTETGSGKYVPRSIFVDLDPSPIDEIRTGPYRQLFHPEQLISGKEDAANNYARGHYTVGKELVDTVVDRVRRLSDNCSSLQGFLVFHSFGGGTGSGFGALLLERLSTEYGKKSKLEFAVYPSPRVSTAVVEPYNAVLSTHS 195 HSP 2 Score: 25.409 bits (54), Expect = 1.684e-66 Identity = 8/19 (42.11%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 631 SVRHTDVSVLLDNESIYDI 687 ++ ++D + L+DNE++YDI Sbjct: 196 TIENSDCTFLVDNEAVYDI 214
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBAL3_MOUSE (Tubulin alpha chain-like 3 OS=Mus musculus GN=Tubal3 PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 3.122e-65 Identity = 115/200 (57.50%), Postives = 149/200 (74.50%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDK-------TVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 MREC+SIHIGQAG+Q+G+ACWELYCLEHGIQPDG +L + V + + +TFF ET AGKHVPR +F+DLEPTVID +R G Y LFHPEQL++GKEDAAN +ARG Y++G E+++L L+RIRKLA+ C+GLQGFL++ + V+Y KK KL F+VYPSP++ST+VVEPYN++L+THS Sbjct: 1 MRECLSIHIGQAGVQIGDACWELYCLEHGIQPDGFILDHQHDNLENPKVEHMNASLDTFFHETRAGKHVPRTLFMDLEPTVIDGIRVGRYHSLFHPEQLVNGKEDAANTYARGRYSVGSEVIELVLERIRKLAEQCSGLQGFLIYRSFGGGTGSGFTSLLMERLSVEYCKKIKLEFSVYPSPRISTAVVEPYNAILTTHS 200 HSP 2 Score: 24.6386 bits (52), Expect = 3.122e-65 Identity = 7/19 (36.84%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 631 SVRHTDVSVLLDNESIYDI 687 ++ ++D + ++DNE++YDI Sbjct: 201 TIEYSDCAFMVDNEALYDI 219
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBA1_NEUCR (Tubulin alpha-A chain OS=Neurospora crassa GN=tba-1 PE=2 SV=3) HSP 1 Score: 239.965 bits (611), Expect = 6.922e-65 Identity = 112/191 (58.64%), Postives = 143/191 (74.87%), Query Frame = 2 Query: 59 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 631 E + IH+GQAG Q+GN+ WELY LEHG+ DG+ D TV G +++TFF+E+ GK+VPR++F+DL+P+ IDE+RTG YRQLFHPE LISGKEDAANN+ARGHYT+GKE+ + LDRIRK+ DNC LQGFLVFH+ DY KK KL F+VYP+P+V+T+VVEPYN+VL+THS Sbjct: 4 EVVHIHLGQAGTQLGNSAWELYLLEHGLTQDGRKDPDSTVAGEGGSYDTFFTESSNGKYVPRSLFVDLDPSPIDEIRTGPYRQLFHPELLISGKEDAANNYARGHYTVGKEMAENVLDRIRKITDNCHSLQGFLVFHSFGGGTGSGFGALVLERLAQDYAKKCKLEFSVYPAPRVATAVVEPYNAVLATHS 194 HSP 2 Score: 29.261 bits (64), Expect = 6.922e-65 Identity = 10/19 (52.63%), Postives = 17/19 (89.47%), Query Frame = 1 Query: 631 SVRHTDVSVLLDNESIYDI 687 ++ H+DV+ L+DNE++YDI Sbjct: 195 TLEHSDVTFLVDNEAVYDI 213 The following BLAST results are available for this feature:
BLAST of FC920219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 413
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920219 ID=FC920219; Name=FC920219; organism=Citrus clementina; type=EST; length=688bpback to top |