FC920219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB3_ECHMU (Tubulin beta-3 chain OS=Echinococcus multilocularis GN=TUB-3 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 7.468e-35 Identity = 74/192 (38.54%), Postives = 107/192 (55.73%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + + GQ G Q+G+ WE EHGI G D + + N +++E GK+VPRA+ +DLEP +D VR+G +LF P+ I G+ A NN+A+GHYT G E+++ LD +RK + C LQGF + H++ +Y + F+V PSP+VS +VVEPYN+ LS H Sbjct: 1 MRELVHMQAGQCGNQIGSKFWETISQEHGIDEMGSYHGDSDLQL--ERINVYYNEGQGGKYVPRALLIDLEPGTMDSVRSGPLGKLFRPDNFIFGQSGAGNNWAKGHYTEGAELIEEVLDVVRKECEACDCLQGFQLCHSLGGGTGSGMGTLLIAKIREEYPDRIMTSFSVVPSPKVSDTVVEPYNATLSVH 190 HSP 2 Score: 25.409 bits (54), Expect = 7.468e-35 Identity = 12/23 (52.17%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 VH L V TD + +DNE++YDI Sbjct: 189 VHQL-VESTDETFCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB_COCHE (Tubulin beta chain OS=Cochliobolus heterostrophus GN=TUB1 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.726e-35 Identity = 75/192 (39.06%), Postives = 108/192 (56.25%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + + GQ G Q+G A W+ EHG+ DG + + T + N +F+E K VPRAV +DLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD +R+ A+ C LQGF + H++ ++ + ++V PSP+VS +VVEPYN+ LS H Sbjct: 1 MREIVHLQTGQCGNQIGAAFWQTISGEHGL--DGSGVYNGTSDLQLERMNVYFNEASNNKFVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATYSVVPSPKVSDTVVEPYNATLSIH 190 HSP 2 Score: 24.2534 bits (51), Expect = 9.726e-35 Identity = 10/23 (43.48%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 +H L V ++D + +DNE++YDI Sbjct: 189 IHQL-VENSDETFCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB_METAN (Tubulin beta chain OS=Metarhizium anisopliae PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.726e-35 Identity = 74/192 (38.54%), Postives = 109/192 (56.77%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + + GQ G Q+G A W+ EHG+ +G + + T + + +F+E K+VPRAV +DLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD +R+ A+ C LQGF + H++ ++ + F+V PSP+VS +VVEPYN+ LS H Sbjct: 1 MREIVHLQTGQCGNQIGAAFWQTISGEHGLDSNG--VYNGTSELQLERMSVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVH 190 HSP 2 Score: 24.6386 bits (52), Expect = 9.726e-35 Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 VH L V ++D + +DNE++YDI Sbjct: 189 VHQL-VENSDETFCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB_GIBFU (Tubulin beta chain OS=Gibberella fujikuroi GN=TUB2 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.727e-35 Identity = 74/192 (38.54%), Postives = 109/192 (56.77%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + + GQ G Q+G A W+ EHG+ +G + + T + + +F+E K+VPRAV +DLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD +R+ A+ C LQGF + H++ ++ + F+V PSP+VS +VVEPYN+ LS H Sbjct: 1 MREIVHLQTGQCGNQIGAAFWQTISGEHGLDSNG--VYNGTSELQLERMSVYFNERSGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVH 190 HSP 2 Score: 24.6386 bits (52), Expect = 9.727e-35 Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 VH L V ++D + +DNE++YDI Sbjct: 189 VHQL-VENSDETFCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB1_SUIBO (Tubulin beta-1 chain OS=Suillus bovinus GN=TUBB1 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.727e-35 Identity = 78/192 (40.62%), Postives = 108/192 (56.25%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + I GQ G Q+G WE+ EHGI+ DG L T + + +++E G+ K+VPRAV +DLEP +D VR+G LF P+ I G+ A NN+A+GHYT G E+VD LD +RK A+ LQGF + H++ +Y + ++V PSP VS +VVEPYN+ LS H Sbjct: 1 MREIVHIQTGQCGNQIGAKFWEVVSDEHGIERDG--LYKGTNDMQLERISVYYNEIGSNKYVPRAVLVDLEPGTMDSVRSGPLGGLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGTDCLQGFQITHSLGGGTGAGMGTLLMSKIREEYPDRMMCTYSVVPSPAVSDTVVEPYNATLSVH 190 HSP 2 Score: 24.6386 bits (52), Expect = 9.727e-35 Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 VH L V ++D + +DNE++YDI Sbjct: 189 VHQL-VENSDETFCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB2_COLGR (Tubulin beta-2 chain OS=Colletotrichum graminicola GN=TUB2 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.267e-34 Identity = 74/192 (38.54%), Postives = 109/192 (56.77%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + + GQ G Q+G A W+ EHG+ +G + + T + + +F+E K+VPRAV +DLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD +R+ A+ C LQGF + H++ ++ + F+V PSP+VS +VVEPYN+ LS H Sbjct: 1 MREIVHLQTGQCGNQIGAAFWQNISGEHGLDSNG--VYNGTSELQLERMSVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVH 190 HSP 2 Score: 24.6386 bits (52), Expect = 1.267e-34 Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 VH L V ++D + +DNE++YDI Sbjct: 189 VHQL-VENSDETFCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB2_COLGL (Tubulin beta-2 chain OS=Colletotrichum gloeosporioides GN=TUB2 PE=3 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.267e-34 Identity = 74/192 (38.54%), Postives = 109/192 (56.77%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + + GQ G Q+G A W+ EHG+ +G + + T + + +F+E K+VPRAV +DLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD +R+ A+ C LQGF + H++ ++ + F+V PSP+VS +VVEPYN+ LS H Sbjct: 1 MREIVHLQTGQCGNQIGAAFWQNISGEHGLDSNG--VYNGTSELQLERMSVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVH 190 HSP 2 Score: 24.6386 bits (52), Expect = 1.267e-34 Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 VH L V ++D + +DNE++YDI Sbjct: 189 VHQL-VENSDETFCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB1_COLGL (Tubulin beta-1 chain OS=Colletotrichum gloeosporioides GN=TUB1 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.267e-34 Identity = 75/195 (38.46%), Postives = 106/195 (54.36%), Query Frame = 2 Query: 53 MRECISIHIGQA---GIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE I + GQ G QVG A W+ EHG+ DG + T D + +F+E K+VPRAV +DLEP +D +R+G F P+ ++ G+ A NN+A+GHYT G E+VD LD +R+ A+ C LQGF + H++ ++ + F+V PSP+VS VVEPYN+ LS H Sbjct: 1 MREIIHLQTGQCLIQGNQVGTAFWQTIHHEHGLDHDGYFRGESTQQS--DRLSVYFAEASNNKYVPRAVLVDLEPATMDAIRSGPLGNFFRPDNMVHGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAETCDSLQGFQITHSLGGGTGSGMGTLLIAKVREEFPDRMMATFSVLPSPKVSEVVVEPYNATLSVH 193 HSP 2 Score: 24.6386 bits (52), Expect = 1.267e-34 Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 VH L V ++D + +DNE++YDI Sbjct: 192 VHQL-VENSDETFCIDNEALYDI 213
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB_PESMI (Tubulin beta chain OS=Pestalotiopsis microspora GN=TUBB PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.267e-34 Identity = 74/192 (38.54%), Postives = 109/192 (56.77%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + + GQ G Q+G A W+ EHG+ +G + + T + + +F+E K+VPRAV +DLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD +R+ A+ C LQGF + H++ ++ + F+V PSP+VS +VVEPYN+ LS H Sbjct: 1 MREIVHLQTGQCGNQIGAAFWQTISGEHGLDSNG--VYNGTSELQLERMSVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEACDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVH 190 HSP 2 Score: 24.6386 bits (52), Expect = 1.267e-34 Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 VH L V ++D + +DNE++YDI Sbjct: 189 VHQL-VENSDETFCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB_ENCHE (Tubulin beta chain OS=Encephalitozoon hellem GN=TUB2 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.800e-34 Identity = 78/195 (40.00%), Postives = 108/195 (55.38%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAF---NTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE I + GQ G QVG WE EHGI G K VG D+ N +++E + K+VPRAV +DLEP +D VR G + LF P+ + G+ A NN+A+GHYT G E++D +D +RK A++ LQGF + H++ D+ + F+V PSP+VS +VVEPYN+ LS H Sbjct: 1 MREIIHLQTGQCGNQVGCKFWETISGEHGIDQTG-----KYVGTSDNQLERVNVYYNEASSKKYVPRAVLIDLEPGTMDAVRQGPFGDLFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVMDVVRKEAESSDCLQGFQITHSLGGGTGAGMGTLLLSKIREDFPDRMICTFSVVPSPKVSDTVVEPYNATLSIH 190 HSP 2 Score: 23.8682 bits (50), Expect = 2.800e-34 Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 +H L V + D + +DNE++YDI Sbjct: 189 IHQL-VENADETFCIDNEALYDI 210 The following BLAST results are available for this feature:
BLAST of FC920219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 413
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920219 ID=FC920219; Name=FC920219; organism=Citrus clementina; type=EST; length=688bpback to top |