FC920219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB_ENCCU (Tubulin beta chain OS=Encephalitozoon cuniculi GN=TUB2 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.800e-34 Identity = 75/192 (39.06%), Postives = 108/192 (56.25%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE I + GQ G QVG WE EHGI G+ + T + N +++E + K+VPRAV +DLEP +D VR G + +LF P+ + G+ A NN+A+GHYT G E++D +D +RK A++ LQGF + H++ D+ + F+V PSP+VS +VVEPYN+ LS H Sbjct: 1 MREIIHLQTGQCGNQVGCKFWETISGEHGIDQTGRYVG--TSDNQLERINVYYNEASSKKYVPRAVLIDLEPGTMDAVRQGPFGELFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVMDVVRKEAESSDCLQGFQITHSLGGGTGAGMGTLLLSKIREDFPDRMICTFSVVPSPKVSDTVVEPYNATLSIH 190 HSP 2 Score: 23.8682 bits (50), Expect = 2.800e-34 Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 +H L V + D + +DNE++YDI Sbjct: 189 IHQL-VENADETFCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB2_PHYPO (Tubulin beta-2 chain OS=Physarum polycephalum GN=BETC PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 4.748e-34 Identity = 72/192 (37.50%), Postives = 106/192 (55.21%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + + +GQ G QVG WE+ EHGI G D + + N +++E K+VPRAV +DLEP V+D +R + +F P+ + A NN+A+GHYT G E+V+ +D +RK A+NC LQGF + H++ ++ + F+V PSP+VS +VVEPYN+ LS H Sbjct: 1 MREIVHVQVGQCGNQVGAKFWEVVSEEHGIDSAGTYKGDTDLQL--ERINVYYNEVAGSKYVPRAVLVDLEPGVLDSIRASSIGSMFRPDNFTHAQSGAGNNWAKGHYTEGAELVESVVDVVRKEAENCDCLQGFQICHSLGGGTGSGLGTLLISKIREEFPDRMMCTFSVMPSPKVSDTVVEPYNATLSIH 190 HSP 2 Score: 23.483 bits (49), Expect = 4.748e-34 Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 +H L V + D + +DNE++YDI Sbjct: 189 IHQL-VENADEVMCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB_ENCIN (Tubulin beta chain OS=Encephalitozoon intestinalis GN=TUB2 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 6.186e-34 Identity = 75/192 (39.06%), Postives = 108/192 (56.25%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE I + GQ G QVG WE EHGI G+ + T + N +++E + K+VPRAV +DLEP +D VR G + +LF P+ + G+ A NN+A+GHYT G E++D +D +RK A++ LQGF + H++ D+ + F+V PSP+VS +VVEPYN+ LS H Sbjct: 1 MREIIHLQTGQCGNQVGCKFWETISGEHGIDQSGRYVG--TSDNQLERVNVYYNEASSKKYVPRAVLIDLEPGTMDAVRQGPFGELFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVMDVVRKEAESSDCLQGFQITHSLGGGTGAGMGTLLLSKIREDFPDRMICTFSVVPSPKVSDTVVEPYNATLSIH 190 HSP 2 Score: 22.7126 bits (47), Expect = 6.186e-34 Identity = 9/23 (39.13%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 +H L V + D + +DNE++YD+ Sbjct: 189 IHQL-VENADETFCIDNEALYDM 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB_PORYE (Tubulin beta chain OS=Porphyra yezoensis GN=TUBB1 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.049e-33 Identity = 74/195 (37.95%), Postives = 108/195 (55.38%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGD---DAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + I GQ G Q+G WE+ EHGI G +G D D +++E G++VPRAV +DLEP V+D ++ G + L+ P+ ++G+ A NN+A+GHYT G E+VD LD +R+ A+ C LQGF V H++ ++ + ++V PSP+VS +VVEPYN LS H Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISEEHGIDSSGAY-----IGTSDLQLDRAEVYYNEGSGGRYVPRAVLVDLEPGVLDTIKAGPHGGLYRPDNFVAGQSGAGNNWAKGHYTEGAELVDSVLDVVRREAEGCDCLQGFQVTHSLGGGTGSGMGTLLVSKIREEFPDRMMCTYSVMPSPKVSDTVVEPYNCTLSVH 190 HSP 2 Score: 21.9422 bits (45), Expect = 1.049e-33 Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 VH L V + D +DNE++Y+I Sbjct: 189 VHQL-VENADAVFCIDNEALYNI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB8_PANTR (Tubulin beta-8 chain OS=Pan troglodytes GN=TUBB8 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.366e-33 Identity = 73/192 (38.02%), Postives = 109/192 (56.77%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + IGQ G Q+G WE+ EH I G D + + N +++E G++VPRAV +DLEP +D VR+G + Q+F P+ I G+ A NN+A+GHYT G E+++ +D +RK A++C LQGF + H++ +Y + F++ PSP+VS +VVEPYN+ LS H Sbjct: 1 MREIVLTQIGQCGNQIGAKFWEVISDEHAINSAGTYHGDSHLQL--ERINVYYNEASGGRYVPRAVLVDLEPGTMDSVRSGPFGQVFRPDNFIFGQCGAGNNWAKGHYTEGAELMESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVVEPYNATLSVH 190 HSP 2 Score: 23.8682 bits (50), Expect = 1.366e-33 Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 VH L + + D + +DNE++YDI Sbjct: 189 VHQL-IENADETFCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB8_HUMAN (Tubulin beta-8 chain OS=Homo sapiens GN=TUBB8 PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 1.366e-33 Identity = 73/192 (38.02%), Postives = 109/192 (56.77%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + IGQ G Q+G WE+ EH I G D + + N +++E G++VPRAV +DLEP +D VR+G + Q+F P+ I G+ A NN+A+GHYT G E+++ +D +RK A++C LQGF + H++ +Y + F++ PSP+VS +VVEPYN+ LS H Sbjct: 1 MREIVLTQIGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQL--ERINVYYNEASGGRYVPRAVLVDLEPGTMDSVRSGPFGQVFRPDNFIFGQCGAGNNWAKGHYTEGAELMESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVVEPYNATLSVH 190 HSP 2 Score: 23.8682 bits (50), Expect = 1.366e-33 Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 VH L + + D + +DNE++YDI Sbjct: 189 VHQL-IENADETFCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBBN_GUITH (Tubulin beta chain, nucleomorph OS=Guillardia theta GN=tubB PE=3 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 1.367e-33 Identity = 69/192 (35.94%), Postives = 106/192 (55.21%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + + +GQ G Q+G WE+ EHG+ +G +K + + +++E + VPRAV +DLEP +D VR Y +LF P+ + G+ A NN+A+GHYT G E+++ +D IRK ++ C LQGF + H++ +Y + ++V PSP+VS +VVEPYN LS H Sbjct: 1 MREIVHVQVGQCGNQIGAKFWEVISHEHGVDTNGTYFGNKD--NQIEKIDVYYNEVSGNRFVPRAVLVDLEPGTMDSVRASNYGRLFRPDNFVFGQSGAGNNWAKGHYTEGAELIESAMDIIRKESEQCECLQGFQIAHSLGGGTGSGMGTLLISKIREEYPDRMMCTYSVVPSPKVSDTVVEPYNCTLSIH 190 HSP 2 Score: 22.7126 bits (47), Expect = 1.367e-33 Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 +H L V + D +DNE++YDI Sbjct: 189 IHQL-VENADEVFCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB_BOMMO (Tubulin beta chain OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.529e-33 Identity = 70/192 (36.46%), Postives = 110/192 (57.29%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + + +G+ G Q+G+ WE+ EHGI P G+ D + + N +++E K+VPRAV +DLEP+ +D +R G Y L+ P+ ++ G A NN+A+GHYT G ++++ LD +RK A+ C LQGF + H++ +Y + ++V PSP VS +VVEPYN+ LS + Sbjct: 1 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYHGDSDLQL--ERINVYYNEAFGAKYVPRAVLVDLEPSTMDSIRGGPYGSLYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLDVVRKEAEGCDCLQGFQLVHSLGGGTGSGMGTLLLANLTDEYPDRITATYSVVPSPTVSETVVEPYNATLSVN 190
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB_EUGGR (Tubulin beta chain OS=Euglena gracilis GN=TUBB PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.997e-33 Identity = 74/196 (37.76%), Postives = 109/196 (55.61%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDA----FNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + I GQ G Q+G+ WE+ E G+ P + G D N +++E G++VP A+ +DLEP +D VR G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD +RK A++C LQGF + H++ +Y + + F+V PSP+VS +VVEPYN+ LS H Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEQGVDPPD-------IPGDSDLQLERINVYYNEATGGRYVP-AILMDLEPGTMDSVRAGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGPELIDSVLDVVRKEAESCDCLQGFQIAHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVIPSPKVSDTVVEPYNTTLSVH 188
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB_PORPU (Tubulin beta chain OS=Porphyra purpurea GN=TUBB1 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.018e-33 Identity = 74/194 (38.14%), Postives = 108/194 (55.67%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQM--LSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + I GQ G Q+G WE+ EHGI G SD + D +++E G++VPRAV +DLEP V+D ++ G + L+ P+ ++G+ A NN+A+GHYT G E+VD LD +R+ A+ C LQGF V H++ ++ + ++V PSP+VS +VVEPYN LS H Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISEEHGIDSSGAYNGTSDLQL----DRAEVYYNEGSGGRYVPRAVLVDLEPGVLDTIKAGPHGGLYRPDNFVAGQSGAGNNWAKGHYTEGAELVDSVLDVVRREAEGCDCLQGFQVTHSLGGGTGSGMGTLLVSKIREEFPDRMMCTYSVMPSPKVSDTVVEPYNCTLSVH 190 HSP 2 Score: 21.9422 bits (45), Expect = 3.018e-33 Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 VH L V + D +DNE++Y+I Sbjct: 189 VHQL-VENADAVFCIDNEALYNI 210 The following BLAST results are available for this feature:
BLAST of FC920219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 413
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920219 ID=FC920219; Name=FC920219; organism=Citrus clementina; type=EST; length=688bpback to top |