FC920219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB2_GEOCN (Tubulin beta-2 chain OS=Geotrichum candidum PE=3 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 3.018e-33 Identity = 76/193 (39.38%), Postives = 109/193 (56.48%), Query Frame = 2 Query: 53 MRECISIHIGQAGI-QVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE +SI GQAG+ QV A W EHG+ DG + D + D + FF+E K+VPRAV +DLEP +D +R+G ++ P+ LISG+ A NN+A+G YT G E++D +D IR+ A+ LQGF + H++ +Y + ++V PSP+VS +V EPYN+VLS H Sbjct: 1 MREIVSIQCGQAGMNQVSTAFWSTITDEHGLDADGHLRPDAS-SLESDRLDVFFNEASNKKYVPRAVAVDLEPATLDAIRSGPLGHIYRPDNLISGESGAGNNWAKGFYTEGAELMDSVMDIIRREAEQSESLQGFQLAHSLGGGTGSGLGTLLLTKIREEYPDRMLSTYSVLPSPKVSDTVTEPYNAVLSFH 192 HSP 2 Score: 23.0978 bits (48), Expect = 3.018e-33 Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 634 VRHTDVSVLLDNESIYDI 687 + + D + LDNE++YDI Sbjct: 195 IDNADATYCLDNEALYDI 212
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB1_COLGR (Tubulin beta-1 chain OS=Colletotrichum graminicola GN=TUB1 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.932e-33 Identity = 74/193 (38.34%), Postives = 106/193 (54.92%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQML-SDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE I + GQ G QVG A W+ EHG+ DG SD+ + + +F+E K+VPRAV +DLEP +D +R+G F P+ ++ G+ A NN+A+GHYT G E+VD LD +R+ A+ C LQGF + H++ ++ + F+V PS +VS VVEPYN+ LS H Sbjct: 1 MREIIHLQTGQCGNQVGTAFWQTIHGEHGLDQDGVFRGSDEQQS---ERLSVYFTEAAKQKYVPRAVLVDLEPATMDAIRSGPLGDFFRPDNMVYGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEACDSLQGFQITHSLGGGTGSGMGTLLIAKVREEFPDRMMATFSVLPSAKVSEVVVEPYNATLSIH 190 HSP 2 Score: 24.2534 bits (51), Expect = 3.932e-33 Identity = 10/23 (43.48%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 +H L V ++D + +DNE++YDI Sbjct: 189 IHQL-VENSDETFCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB1_CHOCR (Tubulin beta-1 chain OS=Chondrus crispus GN=TUBB PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.449e-33 Identity = 75/194 (38.66%), Postives = 107/194 (55.15%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFN---TFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 R +S+ +GQ G QVG WE EHGI DG+ + D+ D + +++E+ +G +VPRA LDLEP V+ ++ QLFHP+ G+ A NN+A+GHYT G E+V+ LD IR+ A+ C LQGF V H++ +Y + ++V PSP+VS +VVEPYN LS H Sbjct: 3 RSIVSLQVGQCGNQVGLKFWEGISAEHGIDVDGKYIGDRP----DQELHRIGVYYNESSSGSYVPRAAMLDLEPGVLMAIKNSKRGQLFHPDNFAYGQSGAGNNWAKGHYTEGAELVETALDIIRREAETCDVLQGFQVTHSLGGGTGSGMGTLLVSKIREEYPDRMMCTYSVLPSPKVSDTVVEPYNCTLSIH 192
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB_SCHPO (Tubulin beta chain OS=Schizosaccharomyces pombe GN=nda3 PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 5.811e-33 Identity = 74/192 (38.54%), Postives = 105/192 (54.69%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + I GQ G QVG A W EHG+ G + T + N +F+E GK+VPRAV +DLEP +D V++G + LF P+ +I G+ A N +A+GHYT G E+ D LD +R+ A+ C LQGF + H++ +Y + F+V P+P+ S +VVEPYN+ LS H Sbjct: 1 MREIVHIQAGQCGNQVGAAFWSTIADEHGLDSAG--IYHGTSEAQHERLNVYFNEAAGGKYVPRAVLVDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAVLDVVRREAEACDALQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRMMATFSVAPAPKSSDTVVEPYNATLSMH 190
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB6_CHICK (Tubulin beta-6 chain OS=Gallus gallus PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 6.669e-33 Identity = 70/192 (36.46%), Postives = 107/192 (55.73%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + + IGQ G Q+G WE+ EHGI G + ++ + N +F+E + K+VPR++ +DLEP +D VR+ LF P+ I G A NN+A+GHYT G E+++ +D +R ++C LQGF + H++ +Y + F+V PSP+VS +VVEPYN++LS H Sbjct: 1 MREIVHLQIGQCGNQIGAKFWEVISDEHGIDIAGNYCGNASLQL--ERINVYFNEAYSHKYVPRSILVDLEPGTMDSVRSSKIGPLFRPDNFIHGNSGAGNNWAKGHYTEGAELIENVMDVVRNECESCDCLQGFQLIHSLGGGTGSGMGTLLINKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNAILSIH 190 HSP 2 Score: 25.409 bits (54), Expect = 6.669e-33 Identity = 10/23 (43.48%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 +H L + +TD + +DNE++YDI Sbjct: 189 IHQL-IENTDETFCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB8_PAPHA (Tubulin beta-8 chain OS=Papio hamadryas GN=TUBB8 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.918e-32 Identity = 71/192 (36.98%), Postives = 108/192 (56.25%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + GQ G Q+G WE+ EH I G D + + + +++E G++VPRAV +DLEP +D VR+G + Q+F P+ I G+ A NN+A+GHYT G E+++ +D +RK A++C LQGF + H++ +Y + F++ PSP+VS +VVEPYN+ LS H Sbjct: 1 MREIVLTQAGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSRLQL--ERIDVYYNEACGGRYVPRAVLVDLEPGTLDSVRSGPFGQIFRPDSFIFGQCGAGNNWAKGHYTEGAELMESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVVEPYNATLSVH 190 HSP 2 Score: 23.8682 bits (50), Expect = 1.918e-32 Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 VH L + + D + +DNE++YDI Sbjct: 189 VHQL-IENADETFCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB2_OOMCK (Tubulin beta-2 chain (Fragment) OS=Oomycete-like sp. (strain MacKay2000) GN=TUBB2 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.256e-32 Identity = 66/166 (39.76%), Postives = 97/166 (58.43%), Query Frame = 2 Query: 131 EHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 EHG+ P G D + + N +++E G++VPRA+ +DLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E++D LD +RK A++C LQGF + H++ +Y + L F+V PSP+VS +VVEPYN+ LS H Sbjct: 2 EHGVDPTGTYHGDSDLQL--ERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRVMLTFSVCPSPKVSDTVVEPYNATLSVH 165 HSP 2 Score: 25.409 bits (54), Expect = 3.256e-32 Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 VH L V + D ++LDNE++YDI Sbjct: 164 VHQL-VENADEVMVLDNEALYDI 185
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB2_ANEPH (Tubulin beta-2 chain (Fragment) OS=Anemia phyllitidis GN=TUBB2 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 5.524e-32 Identity = 62/143 (43.36%), Postives = 89/143 (62.24%), Query Frame = 2 Query: 200 NTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 N +++E G++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD +RK A+NC LQGF V H++ +Y + F+V+PSP+VS +VVEPYN+ LS H Sbjct: 16 NVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMXTFSVFPSPKVSDTVVEPYNATLSVH 158 HSP 2 Score: 25.7942 bits (55), Expect = 5.524e-32 Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 VH L V + D ++LDNE++YDI Sbjct: 157 VHQL-VENADECMVLDNEALYDI 178
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB1_HUMAN (Tubulin beta-1 chain OS=Homo sapiens GN=TUBB1 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 7.184e-32 Identity = 72/193 (37.31%), Postives = 107/193 (55.44%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGD-DAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 MRE + I IGQ G Q+G WE+ EHGI G SD+ + + +++E K+VPRAV +DLEP +D +R+ LF P+ + G A NN+A+GHYT G E+++ L+ +R +++C LQGF + H++ +Y + F+V PSP+VS +VVEPYN+VLS H Sbjct: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAG---SDRGASALQLERISVYYNEAYGRKYVPRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVVEPYNAVLSIH 190 HSP 2 Score: 23.483 bits (49), Expect = 7.184e-32 Identity = 9/23 (39.13%), Postives = 15/23 (65.22%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 +H L + + D +DNE++YDI Sbjct: 189 IHQL-IENADACFCIDNEALYDI 210
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB_AJECA (Tubulin beta chain OS=Ajellomyces capsulata GN=TUB2 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 7.185e-32 Identity = 72/193 (37.31%), Postives = 107/193 (55.44%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGF-TVYPSPQVSTSVVEPYNSVLSTH 628 MRE + + GQ G Q+G A W+ EHG+ DG + ++ + N +F+E K+VPRAV +DLEP +D VR G + QLF P+ + + A N +A+GHYT G E+VD +D +R+ A+ C LQGF + H++ ++ + F +V PSP+VS +VVEPYN+ LS H Sbjct: 1 MREIVHLQTGQCGNQIGAAFWQTISGEHGV--DGAGYYNGSLDIQLERMNVYFNEAAEKKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFVFVQSGAGNTWAKGHYTEGSELVDQVIDVVRREAERCDCLQGFQIIHSLGGGTGAGMGTLLISKIREEFPDRMMATFSSVVPSPKVSDTVVEPYNATLSNH 191 HSP 2 Score: 23.0978 bits (48), Expect = 7.185e-32 Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 1 Query: 634 VRHTDVSVLLDNESIYDI 687 V ++D + +DNE++YDI Sbjct: 194 VENSDETFCIDNEALYDI 211 The following BLAST results are available for this feature:
BLAST of FC920219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 413
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920219 ID=FC920219; Name=FC920219; organism=Citrus clementina; type=EST; length=688bpback to top |