FC920219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG1_DROME (Tubulin gamma-1 chain OS=Drosophila melanogaster GN=gammaTub23C PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23 Identity = 65/191 (34.03%), Postives = 102/191 (53.40%), Query Frame = 2 Query: 59 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPS-PQVSTSVVEPYNSVLS 622 E I++ +GQ G Q+G W+ CLEHGI P G + + G D + FF + ++PRAV LDLEP VI+ + Y +L++PE + K A NN+A G Y+ G+++ + D I + AD L+GF++ H++ Y KK F+V+P+ ++S VV+PYNS+L+ Sbjct: 4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVL--EDFANDGLDRKDVFFYQADDDHYIPRAVLLDLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGSDSLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLT 191
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBBP_DROME (Probable tubulin beta chain CG32396 OS=Drosophila melanogaster GN=CG32396 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23 Identity = 62/195 (31.79%), Postives = 95/195 (48.72%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGD----DAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLST 625 MRE +++ IG AG +G++ W + EHG+ + GG + N FF+ T + + R + +D E + I R A QL+ PE ++G E A NNFARG++T G I+D L+ R+ ++ LQGF + H++ Y + PSP +S VVEPYN++LST Sbjct: 1 MREIVTLQIGGAGNAIGDSFWHVISHEHGVD-----YASGRFGGTSPLQLERINVFFNATASKRFYARTILIDTEASTIQ--RLNASSQLYRPENFVAGSESAGNNFARGYHTDGAAILDQVLENTRREVESVDSLQGFQLLHSIGGGTGSGLTSLIMEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNALLST 188
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG2_DROME (Tubulin gamma-2 chain OS=Drosophila melanogaster GN=gammaTub37C PE=1 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23 Identity = 62/191 (32.46%), Postives = 103/191 (53.93%), Query Frame = 2 Query: 59 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPS-PQVSTSVVEPYNSVLS 622 E I++ +GQ G Q+G W+ CLEHGI PDG + T G D + FF + ++PRAV +DLEP VI+ + T Y +L++ E + K A NN+A G ++ G+++ + D + + AD L+GF++ H++ + KK ++V+P+ ++S VV+PYNS+L+ Sbjct: 4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFAT--DGQDRKDVFFYQADDNHYIPRAVLIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSDSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILT 191
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG_SCHJP (Tubulin gamma chain OS=Schizosaccharomyces japonicus GN=tug1 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23 Identity = 64/192 (33.33%), Postives = 104/192 (54.17%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQ-VSTSVVEPYNSVLS 622 RE I++ GQ G QVG+ W+ CLEHGI PDG + T G D + FF ++ +++PRA+ LDLEP V++ + + Y L++PE + + A NN+A G Y ++I + +D I + A+ L+GF + H++ + KK ++V+P+ + VS VV+PYNS+L+ Sbjct: 3 REIITLQAGQCGNQVGSQFWQQLCLEHGICPDGTLEDFAT--EGLDRKDVFFYQSDDTRYIPRAILLDLEPRVVNNILSDTYGSLYNPENIFVATDGGGAGNNWAHG-YAHAEKIFEDIVDMIDREAEGSDSLEGFSLLHSIAGGTGSGLGSYLLERLNDRFPKKIVQTYSVFPNNRSVSDVVVQPYNSLLT 191
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG2_EUPCR (Tubulin gamma-2 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23 Identity = 62/191 (32.46%), Postives = 101/191 (52.88%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGK--EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLS 622 RE I+ +GQ G Q+G W+ C+EHGI P+G + ++ G+D + FF + +VPRAV +DLEP VI +++ Y L++PE K + A NN+A+G Y G + + ++ I + AD L+GF++ H++ Y KK ++V+P+ + VV+PYN +LS Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGISPEG--ILEEYALDGEDRKDVFFYQADDEHYVPRAVLIDLEPGVIKQIQNSPYSNLYNPENFFVSKTMDGAGNNWAKG-YCEGAKYEEEIIEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLEKLNDHYPKKLVQTYSVFPND--NDIVVQPYNCILS 188
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG2_MOUSE (Tubulin gamma-2 chain OS=Mus musculus GN=Tubg2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 63/192 (32.81%), Postives = 104/192 (54.17%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPS-PQVSTSVVEPYNSVLS 622 RE I++ +GQ G Q+G W+ C EHGI P+G + ++ G D + FF + ++PRAV LDLEP VI + +Y +L++PE + + A NN+ RG ++ G++I + D I + AD L+GF++ H++ Y KK ++V+P+ ++S VV+PYNS+L+ Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEG--IVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSSYAKLYNPENIYLSEHGGGAGNNWGRG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLT 191
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG1_RAT (Tubulin gamma-1 chain OS=Rattus norvegicus GN=Tubg1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22 Identity = 63/192 (32.81%), Postives = 104/192 (54.17%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPS-PQVSTSVVEPYNSVLS 622 RE I++ +GQ G Q+G W+ C EHGI P+G + ++ G D + FF + ++PRAV LDLEP VI + +Y +L++PE + + A NN+A G ++ G++I + D I + AD L+GF++ H++ Y KK ++V+P+ ++S VV+PYNS+L+ Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEG--IVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSSYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLT 191
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG1_MOUSE (Tubulin gamma-1 chain OS=Mus musculus GN=Tubg1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22 Identity = 63/192 (32.81%), Postives = 104/192 (54.17%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPS-PQVSTSVVEPYNSVLS 622 RE I++ +GQ G Q+G W+ C EHGI P+G + ++ G D + FF + ++PRAV LDLEP VI + +Y +L++PE + + A NN+A G ++ G++I + D I + AD L+GF++ H++ Y KK ++V+P+ ++S VV+PYNS+L+ Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEG--IVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSSYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLT 191
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG1_EUPCR (Tubulin gamma-1 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22 Identity = 61/191 (31.94%), Postives = 101/191 (52.88%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLS 622 RE I+ +GQ G Q+G W+ C+EHGI P+G + ++ G+D + FF + +VPRAV +DLEP VI+ ++ Y L++PE + K A NN+ RG Y +++ + ++ I + AD L+GF++ H++ Y KK ++V+P+ + VV+PYN +LS Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGINPEG--ILEEYAQNGEDRKDVFFYQADDEHYVPRAVLIDLEPRVINGIQKSPYASLYNPENIFISKHGGGAGNNWGRG-YCDAEKVQEEIIEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPNE--NDVVVQPYNCLLS 188
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG2_BOVIN (Tubulin gamma-2 chain OS=Bos taurus GN=TUBG2 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.533e-22 Identity = 63/192 (32.81%), Postives = 103/192 (53.65%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPS-PQVSTSVVEPYNSVLS 622 RE I++ +GQ G Q+G W+ C EHGI P+G + ++ G D + FF + ++PRAV LDLEP VI + Y +L++PE + + A NN+A G ++ G++I + D I + AD L+GF++ H++ Y KK ++V+P+ ++S VV+PYNS+L+ Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEG--IVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLT 191 The following BLAST results are available for this feature:
BLAST of FC920219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 413
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920219 ID=FC920219; Name=FC920219; organism=Citrus clementina; type=EST; length=688bpback to top |