FC920219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG1_HUMAN (Tubulin gamma-1 chain OS=Homo sapiens GN=TUBG1 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.533e-22 Identity = 63/192 (32.81%), Postives = 103/192 (53.65%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPS-PQVSTSVVEPYNSVLS 622 RE I++ +GQ G Q+G W+ C EHGI P+G + ++ G D + FF + ++PRAV LDLEP VI + Y +L++PE + + A NN+A G ++ G++I + D I + AD L+GF++ H++ Y KK ++V+P+ ++S VV+PYNS+L+ Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEG--IVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLT 191
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG1_CANFA (Tubulin gamma-1 chain OS=Canis familiaris GN=TUBG1 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.533e-22 Identity = 63/192 (32.81%), Postives = 103/192 (53.65%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPS-PQVSTSVVEPYNSVLS 622 RE I++ +GQ G Q+G W+ C EHGI P+G + ++ G D + FF + ++PRAV LDLEP VI + Y +L++PE + + A NN+A G ++ G++I + D I + AD L+GF++ H++ Y KK ++V+P+ ++S VV+PYNS+L+ Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEG--IVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLT 191
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG1_BOVIN (Tubulin gamma-1 chain OS=Bos taurus GN=TUBG1 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.533e-22 Identity = 63/192 (32.81%), Postives = 103/192 (53.65%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPS-PQVSTSVVEPYNSVLS 622 RE I++ +GQ G Q+G W+ C EHGI P+G + ++ G D + FF + ++PRAV LDLEP VI + Y +L++PE + + A NN+A G ++ G++I + D I + AD L+GF++ H++ Y KK ++V+P+ ++S VV+PYNS+L+ Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEG--IVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLT 191
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG2_HUMAN (Tubulin gamma-2 chain OS=Homo sapiens GN=TUBG2 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.615e-22 Identity = 63/192 (32.81%), Postives = 102/192 (53.12%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYP-SPQVSTSVVEPYNSVLS 622 RE I++ +GQ G Q+G W+ C EHGI P+G + ++ G D + FF + ++PRAV LDLEP VI + Y +L++PE + + A NN+A G ++ G++I + D I + AD L+GF++ H++ Y KK ++V+P ++S VV+PYNS+L+ Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEG--IVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSDVVVQPYNSLLT 191
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG1_XENLA (Tubulin gamma-1 chain OS=Xenopus laevis GN=tubg1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22 Identity = 63/192 (32.81%), Postives = 102/192 (53.12%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPS-PQVSTSVVEPYNSVLS 622 RE I++ +GQ G Q+G W+ C EHGI P+G + ++ G D + FF + ++PRAV LDLEP VI + Y L++PE + + A NN+A G ++ G++I + D I + AD L+GF++ H++ Y KK ++V+P+ ++S VV+PYNS+L+ Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEG--IVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYANLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSHVVVQPYNSLLT 191
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG_PLAFO (Tubulin gamma chain OS=Plasmodium falciparum (isolate NF54) GN=G-TUB PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.343e-21 Identity = 61/193 (31.61%), Postives = 101/193 (52.33%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYP--SPQVSTSVVEPYNSVLS 622 RE I++ GQ G Q+G W+ C EH I +G + ++ + +D + FF + +P A+ DLEP VI+ ++T YR L++PE + KE A NN+ G Y+ G ++ + +D I + DN L+GF++ H++ +Y KK F+V+P + + S VV+PYNS+L+ Sbjct: 3 REIITLQCGQCGNQIGVEFWKQLCNEHNIDQEGILKNNNFLN--EDRKDIFFYQADDEHFIPGALLFDLEPRVINSIQTSEYRNLYNPENMFISKEGGGAGNNWGCG-YSQGHKVEEEIIDMIDREVDNSDNLEGFILSHSIAGGTGSGMGSYLLELLNDNYSKKMIQTFSVFPLLTNESSDVVVQPYNSILT 192
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG_ENTHI (Tubulin gamma chain OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.343e-21 Identity = 63/194 (32.47%), Postives = 104/194 (53.61%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQ-LISGKEDAANNFARGHYTIGK--EIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVY--PSPQVSTSVVEPYNSVLS 622 RE I++++GQ G Q+G+ ++ C EHGI PDG + +++ + DD + FF + ++VPR++ +DLEP V+D +RT +R ++PE +I A N++A G+YT K EI ++ I + ++C L+GF H++ Y K F+V +P V VV PYNS+L+ Sbjct: 3 REIITLNVGQCGNQLGSEFFKKICSEHGILPDGSLSTNEFI---DDRKDVFFYQADDQRYVPRSINIDLEPRVLDSIRTSEWRNFYNPENFIIPTNNGAGNSWANGYYTTEKMSEIEEI----IDREVEHCDSLEGFFFCHSICGGTGSGLGSKIMEMISEKYPKNILTSFSVMVKENPDV---VVSPYNSILT 186
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG_DICDI (Tubulin gamma chain OS=Dictyostelium discoideum GN=tubC PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.754e-21 Identity = 64/191 (33.51%), Postives = 99/191 (51.83%), Query Frame = 2 Query: 56 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLS 622 RE I++ +GQ G Q+G+ W+ C EHGI G + ++ G D + FF ++ +VPRA+ LDLEP VID ++T Y L++ E + ++ A NN+A G Y G+ D D I + AD L+GFL+ H++ + KK ++V+P S+ VV+ YNSVL+ Sbjct: 3 REIITLQVGQCGNQIGSEFWKQLCKEHGINAAGYL--EEFAKPGIDRKDVFFYQSDDDHYVPRALLLDLEPRVIDSIKTSEYSGLYNQENIFVAEKGTGAGNNWANG-YKQGESFYDDIFDMIDREADGSESLEGFLLTHSISGGTGSGMGSYILERLNDRFPKKIIQTYSVFPDD--SSVVVQQYNSVLT 188
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBB_HALDI (Tubulin beta chain (Fragment) OS=Haliotis discus PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 9.181e-21 Identity = 47/115 (40.87%), Postives = 68/115 (59.13%), Query Frame = 2 Query: 284 VRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 628 VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A++C LQGF + H++ +Y + F+V PSP+VS +VVEPYN+ LS H Sbjct: 2 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVH 116 HSP 2 Score: 26.1794 bits (56), Expect = 9.181e-21 Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 619 VHSLSVRHTDVSVLLDNESIYDI 687 VH L V +TD + +DNE++YDI Sbjct: 115 VHQL-VENTDETYCIDNEALYDI 136
BLAST of FC920219 vs. ExPASy Swiss-Prot
Match: TBG_ENCCU (Tubulin gamma chain OS=Encephalitozoon cuniculi GN=TUB4 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20 Identity = 60/195 (30.77%), Postives = 98/195 (50.26%), Query Frame = 2 Query: 53 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS-VVEPYNSVLSTH 628 MRE +++ +GQ G Q+G W+ C EHGI G + + +G D + FF + VPRA+ +DLEP VI + + F E + E A NN+ G Y +GK + + +D I++ A+ C L+ FL+ H++ ++ KK ++++P+ S+ VV+PYNSVL+ H Sbjct: 1 MREVVTLQVGQCGNQMGAEFWKTLCKEHGISMCGVLQDSRDLG---DRKDVFFYQADDNVFVPRAILVDLEPRVISQAPS-----FFSQESIFLSNEGGGAGNNWGHG-YCVGKAMGNDVIDMIQREAEGCDALETFLLLHSIAGGTGSGFGSLLLERIKEEFPKKIVQTYSIFPNNDESSDVVVQPYNSVLTLH 186 The following BLAST results are available for this feature:
BLAST of FC920219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 413
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920219 ID=FC920219; Name=FC920219; organism=Citrus clementina; type=EST; length=688bpback to top |