FC920231
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_YEAST (Ribulose-phosphate 3-epimerase OS=Saccharomyces cerevisiae GN=RPE1 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.933e-25 Identity = 65/161 (40.37%), Postives = 91/161 (56.52%), Query Frame = 2 Query: 236 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP-------------LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 I++PSIL+++FA LG + V AG DW+H+DVMDG FVPNIT+G +V +LR P D H+M+ PE+ V DF K GAD + H E + +HL + IK G KA + P TS+ + + +D+ L+M+V PGFGG F Sbjct: 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHL---VKLIKSKGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKF 162
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE1_ORYSJ (Ribulose-phosphate 3-epimerase, cytoplasmic isoform OS=Oryza sativa subsp. japonica GN=Os09g0505700 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.636e-24 Identity = 60/149 (40.27%), Postives = 86/149 (57.72%), Query Frame = 2 Query: 239 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV---VDLVLIMSVNPGFGGASF 676 ++PS+LS++FA L + + G DW+H+D+MDG FVPN+TIG V+ +LR T LD HLM+ P V KAGA + H E S + + IK G + GV L P T + + +++ V+LVL+M+V PGFGG F Sbjct: 9 IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRD-NWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKF 156
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_SCHPO (Ribulose-phosphate 3-epimerase OS=Schizosaccharomyces pombe GN=SPAC31G5.05c PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.061e-23 Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 2 Query: 239 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALR---PVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 ++PS+L+ +FA L ++V + G DW+HVDVMD +FVPN+TIGP+VV A+R + D HLM++EPE+ + AGA + H E +T +++ + G G L P T + I ++ +D+VL+M+V PG GG SF Sbjct: 6 IAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQFVPNLTIGPIVVKAMRNHYTKEEAFFDCHLMVIEPERYIDQLADAGASLFCFHYE--ATEKHEEIISRAHEKGMLVGCALKPKTPVEVILPFVEKLDMVLVMTVEPGKGGQSF 152
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_CANGA (Ribulose-phosphate 3-epimerase OS=Candida glabrata GN=RPE1 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.061e-23 Identity = 62/163 (38.04%), Postives = 90/163 (55.21%), Query Frame = 2 Query: 236 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP----------------LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 I++PSIL+++FA LG + V +G +W+H+DVMDG FVPNIT+G +V +LR D H+M+ EPE+ V DF KAGAD + H E +T + IK+ G KA + P T + + + +D+ L+M+V PGFGG F Sbjct: 5 IIAPSILASDFANLGCECHRVINSGAEWLHIDVMDGHFVPNITLGQPIVTSLRRAVPRSQEEEKASGEVARPTAFFDCHMMVEEPEKWVADFAKAGADQFTFHYE--ATKDPLSLVKLIKENGIKAACAIKPGTPVDVLFELAPYLDMALVMTVEPGFGGQKF 165
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: ALSE_ECOLI (D-allulose-6-phosphate 3-epimerase OS=Escherichia coli (strain K12) GN=alsE PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.363e-23 Identity = 49/146 (33.56%), Postives = 88/146 (60.27%), Query Frame = 2 Query: 239 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 +SPS++ + K EQ++ ++ + D+ H+D+MDG FVPN+T+ P V ++ + PLD HLM+ P+ + +AGAD +++H E + R +++I+ K G++LNP T + A++ + D + +M+V+PGF G F Sbjct: 3 ISPSLMCMDLLKFKEQIEFID-SHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETING-QAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAGQPF 146
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_ASHGO (Ribulose-phosphate 3-epimerase OS=Ashbya gossypii GN=RPE1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.263e-23 Identity = 61/158 (38.61%), Postives = 91/158 (57.59%), Query Frame = 2 Query: 236 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--------TDLP---LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 I++PSIL+++FA L V AG +W+H+DVMDG FVPNIT+GP +V +LR +D P D H+M+ EPE+ V F++ GAD + H E +T + + IK G +A + P T + + + +D+ L+M+V PGFGG F Sbjct: 5 IIAPSILASDFANLECGCHRVINAGAEWLHIDVMDGHFVPNITLGPPIVKSLRKAVPRVGDKESDKPKAFFDCHMMVAEPEKWVDVFVENGADQFTFHYE--ATKNPLELVKLIKSRGIRAACAIKPDTPVDVLFELAPYLDMALVMTVEPGFGGQKF 160
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_PONAB (Ribulose-phosphate 3-epimerase OS=Pongo abelii GN=RPE PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.456e-22 Identity = 57/148 (38.51%), Postives = 89/148 (60.14%), Query Frame = 2 Query: 239 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G VV++LR D D+H+M+ +PEQ V AGA+ + H E +T + + I++ G K G+ + P TS+ + + +D+ L+M+V PGFGG F Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYAFHLE--ATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKF 152
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_HUMAN (Ribulose-phosphate 3-epimerase OS=Homo sapiens GN=RPE PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.456e-22 Identity = 57/148 (38.51%), Postives = 89/148 (60.14%), Query Frame = 2 Query: 239 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G VV++LR D D+H+M+ +PEQ V AGA+ + H E +T + + I++ G K G+ + P TS+ + + +D+ L+M+V PGFGG F Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLE--ATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKF 152
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_MOUSE (Ribulose-phosphate 3-epimerase OS=Mus musculus GN=Rpe PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.296e-21 Identity = 56/148 (37.84%), Postives = 88/148 (59.46%), Query Frame = 2 Query: 239 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G VV++LR D D+H+M+ PEQ V AGA+ + H E +T + + I++ G K G+ + P T++ + + +D+ L+M+V PGFGG F Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLE--ATENPGALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKF 152
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_ENCCU (Ribulose-phosphate 3-epimerase OS=Encephalitozoon cuniculi GN=RPE1 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.999e-15 Identity = 51/146 (34.93%), Postives = 73/146 (50.00%), Query Frame = 2 Query: 248 SILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH---CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 SIL NF L E++ ++ G IH+DVMD FV NIT GP +++ + D DVH+M+ P + +V++H C+++ R N + G+ LNP T + E + D VLIMSV PGFGG F Sbjct: 13 SILDCNFGNLEEELGELKRNGVTNIHLDVMDTTFVKNITFGPCIINRILE-HDFVFDVHMMVESPLDIIMQIDLERVSLVTIHSEVCDKAGVAEYLRKRNVL------FGIALNPETQVDDAE--MRSADFVLIMSVKPGFGGQKF 149 The following BLAST results are available for this feature:
BLAST of FC920231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920231 ID=FC920231; Name=FC920231; organism=Citrus clementina; type=EST; length=677bpback to top |