FC920233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3) HSP 1 Score: 291.967 bits (746), Expect = 1.950e-78 Identity = 144/195 (73.85%), Postives = 165/195 (84.62%), Query Frame = 1 Query: 88 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGID 672 EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVARCTKII+ +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE P+LHPE+ V LGI+ Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIE 207
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 4.345e-78 Identity = 141/195 (72.31%), Postives = 165/195 (84.62%), Query Frame = 1 Query: 88 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGID 672 ++E K++K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVARCTKII+ +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE P+LHPE+ V LGI+ Sbjct: 13 KEEEKEDKPIRSLDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIE 207
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 2.231e-74 Identity = 132/195 (67.69%), Postives = 162/195 (83.08%), Query Frame = 1 Query: 88 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGID 672 +D ++EKN + LDE DIA+LK YG GPY+ +K + +I++ KKVN+L G+KESDTGLA P+ WD+ +DKQ MQ+EQPLQVARCTKII+ + D +Y+INVKQ AKFVV L D V+PTDIEEGMRVGVDRNKYQI +PLP KIDP+VTMM VEEKPDVTY+DVGGCK+QIEK+REVVE P+LHPE+ V LGI+ Sbjct: 15 DDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKKVNELSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIE 209
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2) HSP 1 Score: 278.485 bits (711), Expect = 2.231e-74 Identity = 135/168 (80.36%), Postives = 153/168 (91.07%), Query Frame = 1 Query: 169 PYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGID 672 PYS IKK EKEI ++A+K+ +L GIKESDTGLA P+QWDLVSDKQMMQEEQPL VA CT+IISPN+EDAKYV+++K+I K+VVGLGDK SPTDIE GMRVGVD+ KYQIQIPLPPKIDPSVTMMTVEEKPD TY+D+GGCKEQIEK+REVVELPMLHPEK V+LGID Sbjct: 71 PYSARIKKVEKEINELAEKICNL-GIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGID 237
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2) HSP 1 Score: 270.781 bits (691), Expect = 4.653e-72 Identity = 137/208 (65.87%), Postives = 164/208 (78.85%), Query Frame = 1 Query: 58 KESKAMAPEPED-EIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIIS--PNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGID 672 KE +P D E +++KNP PLDE DI LLK+Y GPY+ + +++ + + K++ND GIKESDTGLA S WD+ +D+Q M EEQPLQVARCTKII ++E YVIN+KQIAKFVV LG++VSPTDIEEGMRVG DRNKY IQ+PLPPKIDPSVTMM VEEKPDVTY DVGGCKEQIE++REVVELP+L PE+ VKLGID Sbjct: 4 KEDWEKYQKPVDTEEENDKNPPPLDEGDIELLKSYATGPYARELAAIKEDTEAVLKRINDTVGIKESDTGLAPISFWDVAADRQRMSEEQPLQVARCTKIIENEQSAEKNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGID 211
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 1.830e-68 Identity = 132/233 (56.65%), Postives = 163/233 (69.96%), Query Frame = 1 Query: 67 KAMAP-EPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPN------------------------------SEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGID 672 K AP E +D+ D+ PL E DI +LK+YG PY+ +K+ E ++KD+ ++ + G+KESDTGLA WD++ D+Q + EE PLQVARCTKII N EDAKYVIN+KQIAKFVVGLG++VSPTDIEEGMRVGVDR+KY I++PLPP+IDPSVTMMTVEEKPDVTY+DVGGCK+QIEK+REVVELP+L PE+ LGID Sbjct: 9 KYKAPLEDDDKKPDDDKIVPLTEGDIQVLKSYGAAPYAAKLKQTENDLKDIEARIKEKAGVKESDTGLAPSHLWDIMGDRQRLGEEHPLQVARCTKIIKGNGESDETTTDNNNSGNSNSNSNQQSTDADEDDEDAKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGID 241
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: FB58_ARATH (F-box protein At1g53790 OS=Arabidopsis thaliana GN=At1g53790 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.088e-20 Identity = 52/72 (72.22%), Postives = 57/72 (79.17%), Query Frame = 1 Query: 121 PLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQV 336 PLDEDDIAL+KTYGL PYS IKK EKEIK++ +K+NDLCGIKESDTGLA S KQMMQE QPLQV Sbjct: 9 PLDEDDIALVKTYGLVPYSAPIKKVEKEIKELTEKINDLCGIKESDTGLAPLS-------KQMMQEGQPLQV 73
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.625e-16 Identity = 56/174 (32.18%), Postives = 87/174 (50.00%), Query Frame = 1 Query: 148 LKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGI 669 LK Y Y I++ E ++D + + L + G L + Q +QE V K++ K +I + Q K++V + + D+ G+RV + + Y + LP KIDP V++M VE+ PD TY VGG EQI++++EV+ELP+ HPE LGI Sbjct: 27 LKNY----YIAKIQEKEIVLRDKIENLRRLQAQRNELNGRVR----SLKEELQQLQEPGS-HVGEVVKVMGKK----KVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGI 187
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15 Identity = 54/166 (32.53%), Postives = 90/166 (54.22%), Query Frame = 1 Query: 172 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGI 669 Y+ I+ AE I +K +L ++ GL A + L+ ++ + +E V K + N K ++ V K+VV + + +I+ +RV + + YQ+ LP K+DP V++M VE+ PD TY VGG ++QI++++EV+ELP+ HPE LGI Sbjct: 20 YTQKIQDAELAI---LQKTQNLRRLEAQRNGLNARVR--LLREEIQLLQEPGSYVGEVIKTMGKN----KVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGI 176
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.376e-15 Identity = 47/154 (30.52%), Postives = 83/154 (53.90%), Query Frame = 1 Query: 208 KDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGI 669 + + +K N+L ++ L S+ ++ ++ + +E V K++ N K ++ V K+VV + + T I RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE LGI Sbjct: 45 RQLRQKTNNLNRLEAQRNELN--SRVRMLREELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGI 192 The following BLAST results are available for this feature:
BLAST of FC920233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920233 ID=FC920233; Name=FC920233; organism=Citrus clementina; type=EST; length=673bpback to top |