FC920233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.797e-15 Identity = 60/182 (32.97%), Postives = 94/182 (51.65%), Query Frame = 1 Query: 124 LDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGI 669 L + ++ K G PY I K E+ +A+K +L ++ L A + L + Q++QE Q + +++ P + K ++ V KFVV L V D+ RV + Y + LP K+DP V++M VE+ PD TY VGG +QI++++EV+ELP+ HPE LGI Sbjct: 3 LTKMEVDSTKGEGFRPYY--ITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRM-LREELQLLQE----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 176
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4) HSP 1 Score: 82.4185 bits (202), Expect = 2.347e-15 Identity = 52/171 (30.41%), Postives = 89/171 (52.05%), Query Frame = 1 Query: 160 GLGPY-STSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGI 669 G+ PY I++ E +I+ + V L + A + + D+ + +E V KI+S D K ++ V+ K++V + ++ D++ RV + + Y + L K DP V++M VE+ PD TY+ VGG +QI++++EV+ELP+ HPE LGI Sbjct: 18 GIKPYFEQKIQETELKIRSKTENVRRLEAQRN-----ALNDKVRFIKDELRLLQEPGSYVGEVIKIVS----DKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGI 179
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.065e-15 Identity = 57/170 (33.53%), Postives = 90/170 (52.94%), Query Frame = 1 Query: 160 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGI 669 G G S I+K E+ +A+K +L ++ L A + L + Q++QE Q + +++ P + K ++ V KFVV L + D+ RV + Y + LP K+DP V++M VE+ PD TY VGG +QI++++EV+ELP+ HPE LGI Sbjct: 16 GEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRM-LREELQLLQE----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 179
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.065e-15 Identity = 46/134 (34.33%), Postives = 74/134 (55.22%), Query Frame = 1 Query: 286 DLVSDKQMMQEEQPL------QVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGI 669 +L S +M++EE L V K++ N K ++ V K+VV + + T + RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE LGI Sbjct: 63 ELNSRVRMLREELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGI 192
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.228e-15 Identity = 54/181 (29.83%), Postives = 89/181 (49.17%), Query Frame = 1 Query: 199 KEIKDMAKKVNDLCGIKESDTGLAAPSQWD---LVSDKQMMQEEQ--------------------PLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGID 672 K+I+D+ K+V L KE ++ W L DK +++ E+ PL +A T+++ +D + + FV+ + +E G RV +++ + I LP + DP VT M VEEKPDV+Y +GG +EQ+ +++E VELP+ PE K+GI+ Sbjct: 10 KKIEDLKKEVRML---KEENSKTKRNLMWKIRKLEKDKLLIENERTRLDREVKSLRGEIERFRTPPLVIATVTEVL----DDHRVAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIE 183
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.228e-15 Identity = 54/162 (33.33%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 202 EIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPL------QVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGI 669 +I+++ KVN+ K D + +L + +M++EE L VA K++ N K ++ V KFVV + V + R + Y + LP KIDP V++M VE+ PD TY+ VGG +QI++++EV+ELP+ HPE LGI Sbjct: 23 KIEELEIKVNE----KAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEVVKLMGKN----KVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGI 176
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.165e-14 Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 352 IISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGID 672 ++S ED + V+ KFVV ++ +++ G RV +++ I LP DP V VEEKP+V+Y D+GG QIE++RE VELP+L PE ++GI+ Sbjct: 67 VVSDILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIE 173
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS10_CAEEL (Probable 26S protease regulatory subunit S10B OS=Caenorhabditis elegans GN=rpt-4 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.521e-14 Identity = 49/163 (30.06%), Postives = 89/163 (54.60%), Query Frame = 1 Query: 181 SIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGI 669 S ++ E +D+ +K+ DL + T S+ D+ S + + Q V K +S + K+++ ++VVG ++ ++++G RV +D I LP ++DP V M+ E+ +++Y+DVGG EQI ++REVVELP+++PE ++GI Sbjct: 28 SYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQI-----VGEVLKQLS----EEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGI 181
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.987e-14 Identity = 42/127 (33.07%), Postives = 70/127 (55.12%), Query Frame = 1 Query: 289 LVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGI 669 L+ ++ + +EQ V + + + K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE LGI Sbjct: 53 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGI 175
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.595e-14 Identity = 42/127 (33.07%), Postives = 70/127 (55.12%), Query Frame = 1 Query: 289 LVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGI 669 L+ ++ + +EQ V + + + K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE LGI Sbjct: 58 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI 180 The following BLAST results are available for this feature:
BLAST of FC920233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920233 ID=FC920233; Name=FC920233; organism=Citrus clementina; type=EST; length=673bpback to top |