FC920233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.197e-13 Identity = 38/116 (32.76%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 325 PLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGID 672 PL + + ++I N+ ++ + + V + ++ ++ VG+DR+ + LPP+ D S+++++ EKPDVTYND+GGC Q +++RE VELP+ H E ++GID Sbjct: 81 PLVIGQFMEMIDQNNA----IVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGID 192
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.869e-13 Identity = 50/175 (28.57%), Postives = 84/175 (48.00%), Query Frame = 1 Query: 172 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISP---------NSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGI 669 YST ++K E ++K+ +K L ++ L ++ D+ + +++E + K+ P + K V+ F+V L V P DI G RV +++ + LP + D M +EEKPD+ + D+GG QI ++EVVELP+ +PE K+GI Sbjct: 7 YSTDVQKNEMDLKEFKEKAY-LAELESKVLRLELKNK-DITRENVQIKKENEILKRELDKLRIPPLILGTVLDRVNERKAVVKSSTGPNFLVNLSQFVEPDDIVPGARVCLNQQTLAVVEVLPKEKDYRAMAMELEEKPDILFGDIGGLNNQIRDIKEVVELPLKNPELFEKVGI 179
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.869e-13 Identity = 50/175 (28.57%), Postives = 85/175 (48.57%), Query Frame = 1 Query: 172 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISP---------NSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGI 669 YST I+K + ++K+ +K + ++ L ++ D+ + +++E + K+ P + K V+ F+V L V P DI G RV +++ I LP + D M +EEKPD+++ D+GG QI ++EVVELP+ +PE K+GI Sbjct: 7 YSTDIEKNKMDLKEFKEKTQ-IAELESKVLRLELKNK-DISRENVQIKKENEILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGI 179
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.869e-13 Identity = 62/214 (28.97%), Postives = 103/214 (48.13%), Query Frame = 1 Query: 43 SSKLAKESKAMAPE--PEDEIKDEKNPRP--LDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGID 672 S++L KE KA E E EI D N + L E+ L + + + I K E E K++ ++ L +KE++ ++ + PL V + + K V+ F+V + V+P D+ G RV +++ + LP D M V+E+P+V Y D+GG ++Q++++REVVELP+ HPE K+GI+ Sbjct: 8 STELKKEKKAFTEEFKEEKEINDNSNLKNDLLKEE---LQEKARIAELESRILKLELEKKELERENLQL--MKENE----------ILRRELDRMRVPPLIVGTVVDKVG----ERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIE 202
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.747e-13 Identity = 36/101 (35.64%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 370 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGID 672 +D + ++ +FVV + + ++ G RV +D+ I LP + DPSV V E+P VTYND+GG ++Q++++RE +ELP+ HPE ++GI+ Sbjct: 70 DDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIE 170
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.747e-13 Identity = 50/175 (28.57%), Postives = 85/175 (48.57%), Query Frame = 1 Query: 172 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISP---------NSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGI 669 YST I+K + ++K+ +K + ++ L ++ D+ + +++E + K+ P + K V+ F+V L V P DI G RV +++ I LP + D M +EEKPD+++ D+GG QI ++EVVELP+ +PE K+GI Sbjct: 7 YSTDIEKNKMDLKEFKEKTQ-IAELESKVLRLELKNK-DINRENVQIKKENEILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGI 179
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.747e-13 Identity = 49/175 (28.00%), Postives = 85/175 (48.57%), Query Frame = 1 Query: 172 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISP---------NSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGI 669 YST ++K + ++K+ +K + ++ L ++ D+ + +++E + K+ P + K V+ F+V L V P DI G RV +++ I LP + D M +EEKPD+++ D+GG QI ++EVVELP+ +PE K+GI Sbjct: 7 YSTDVEKNKMDLKEFKEKTQ-IAELESKVLRLELKNK-DISRENVQIKKENEILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGI 179
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.894e-13 Identity = 33/100 (33.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 370 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGI 669 + ++++ ++VVG + V + + +G+RV +D I LP ++DP V M++E+ D+++ VGG EQI ++REV+ELP+ +PE +++GI Sbjct: 64 DSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGI 163
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13 Identity = 35/88 (39.77%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 409 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGID 672 +FVV + + +++ G RV +D+ I LP + DPSV V E+P V+YND+GG +Q++++RE +ELP+ HPE K+GI+ Sbjct: 84 RFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVGIE 171
BLAST of FC920233 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13 Identity = 43/137 (31.39%), Postives = 71/137 (51.82%), Query Frame = 1 Query: 289 LVSDKQMMQEEQPLQVARCTKIISPNS---------EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKXVKLGID 672 L +DK+ ++ E +++ P + +D + ++ +FVV + + ++ G RV +D+ I LP + DPSV V EKP VTY D+GG + Q+ ++RE VELP+ HPE K+GI+ Sbjct: 34 LEADKERLERELSRLRTEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEVIEKPRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIE 170 The following BLAST results are available for this feature:
BLAST of FC920233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920233 ID=FC920233; Name=FC920233; organism=Citrus clementina; type=EST; length=673bpback to top |