FC920234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_STRAW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptomyces avermitilis GN=gatA PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.526e-33 Identity = 65/158 (41.14%), Postives = 106/158 (67.09%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 E+TA Q+ E +L+R+ + ++ +F+HV L +A+++D+K +R E +GPLAGV + +KD T +P+T GS++LE + PP+DAT KK+K D +++GKTN+DEF MGS+TE+S++ T NPWD+SR+P + +++G+DTG Sbjct: 24 ELTAVQVTEAHLARIDAVDEKVHAFLHVDREGALAQARAVDEKRERGEKLGPLAGVPLALKDIFTTEGIPTTVGSKILEGWIPPYDATLTKKLKAADVVILGKTNMDEFAMGSSTENSAYGPTGNPWDLSRIPGGSGGGSSAALASFEAPLAIGTDTG 181
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_STRCO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptomyces coelicolor GN=gatA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.008e-32 Identity = 63/158 (39.87%), Postives = 107/158 (67.72%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 E+TA Q+ E +L+R++ + ++ +F+HV L +A+++D+K +R E +GPLAGV + +KD T +P+T GS++LE + PP+DAT K++K D +++GKTN+DEF MGS+TE+S++ T NPWD++++P Q +++G+DTG Sbjct: 20 ELTAVQVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVDEKRERGEKLGPLAGVPLALKDIFTTEGIPTTVGSKILEGWIPPYDATVTKRLKAADVVILGKTNMDEFAMGSSTENSAYGPTGNPWDLTKIPGGSGGGSSAALAAFQAPLAIGTDTG 177
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_DESRM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfotomaculum reducens (strain MI-1) GN=gatA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.008e-32 Identity = 64/159 (40.25%), Postives = 105/159 (66.04%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLK-EAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E++A + E +R++ E ++KS++ ++ + +A+ +D KI E++GPLAG+ + +KDN+CT + +T S++L N+ PP+ AT+V+KV D ++VGKTN+DEF MGS+TE+S F +T NPWD+ RVP + ++SLGSDTG Sbjct: 18 KEISALDITEAVYNRIEQVEDKVKSYLTLTREQAEIKARQVDQKIAAGESIGPLAGIPIAIKDNMCTQGIRTTCASKILYNFVPPYSATSVEKVYTADMVMVGKTNMDEFAMGSSTENSGFHLTHNPWDLDRVPGGSSGGSAAAVAAGEAIISLGSDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CLOBH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=gatA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32 Identity = 64/159 (40.25%), Postives = 105/159 (66.04%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +EV A ++ + +L R+ L + +L ++++VS +K+A+ ID KI++NE + L+G+ VG+KDNI M +T S++LE Y P+DA +K+K+ +GI++GK N+DEF MGS+TE+S+F++ NPWD+ RVP + +SLG+DTG Sbjct: 18 KEVKAEEITKAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDGKIEKNEELKALSGIPVGIKDNINVKGMQNTCASKILEGYTSPYDAHVTEKIKQEEGIILGKLNMDEFAMGSSTENSAFKLAKNPWDLERVPGGSSGGSAVAVAGSEATLSLGTDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CLOB1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=gatA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32 Identity = 64/159 (40.25%), Postives = 105/159 (66.04%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +EV A ++ + +L R+ L + +L ++++VS +K+A+ ID KI++NE + L+G+ VG+KDNI M +T S++LE Y P+DA +K+K+ +GI++GK N+DEF MGS+TE+S+F++ NPWD+ RVP + +SLG+DTG Sbjct: 18 KEVKAEEITKAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDGKIEKNEELKALSGIPVGIKDNINVKGMQNTCASKILEGYTSPYDAHVTEKIKQEEGIILGKLNMDEFAMGSSTENSAFKLAKNPWDLERVPGGSSGGSAVAVAGSEATLSLGTDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CLOBL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=gatA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.004e-32 Identity = 64/159 (40.25%), Postives = 105/159 (66.04%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +EV A ++ + +L R+ L + +L ++++VS +K+A+ ID KI++NE + L+G+ VG+KDNI M +T S++LE Y P+DA +K+K+ +GI++GK N+DEF MGS+TE+S+F++ NPWD+ RVP + +SLG+DTG Sbjct: 18 KEVKAEEITKAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDVKIEKNEELKALSGIPVGIKDNINVKGMQNTCASKILEGYTSPYDAHVTEKIKQEEGIILGKLNMDEFAMGSSTENSAFKLAKNPWDLERVPGGSSGGSAVAVAGSEATLSLGTDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CLOBK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Okra / Type B1) GN=gatA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.535e-32 Identity = 63/159 (39.62%), Postives = 105/159 (66.04%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +EV A ++ + +L R+ L + +L ++++VS +K+A+ ID KI++NE + L+G+ +G+KDNI M +T S++LE Y P+DA +K+K+ +GI++GK N+DEF MGS+TE+S+F++ NPWD+ RVP + +SLG+DTG Sbjct: 18 KEVKAEEITKAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDVKIEKNEELKALSGIPIGIKDNINVKGMQNTCASKILEGYTSPYDAHVTEKIKQEEGIILGKLNMDEFAMGSSTENSAFKLAKNPWDLERVPGGSSGGSAVAVAGSEATLSLGTDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CHLSY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=gatA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.535e-32 Identity = 62/158 (39.24%), Postives = 105/158 (66.46%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++TA +L E L+R+ EP +++F+H++ + L A++ D++ ++ ++GPL G+ + +KD ICT +P+TAGSR+L +RPP++AT ++++ ++VGK N DEF MGS+TE+S++Q+T NPWD +RVP Q +LG+DTG Sbjct: 20 DITAVELTEACLARINATEPTIRAFLHLTPDAALAAARAADERRQQGRSLGPLDGIPIAIKDVICTDGVPTTAGSRILAGFRPPYNATVIERLVAAGAVLVGKLNCDEFAMGSSTENSAYQITTNPWDPTRVPGGSSGGSAAAVAAGQVPATLGTDTG 177
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CHLMU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydia muridarum GN=gatA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.535e-32 Identity = 68/159 (42.77%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 RE++ T + E + R++ + Q+ SF+ + L A IDDK+ + + +G LAG+ +GVKDNI + +T S++LEN+ PFDAT V++++ DGI++GK N+DEF MGSTT S+FQ T NPWD+ RVP R C ++LGSDTG Sbjct: 16 REISVTAITEYFYHRIESYDEQIGSFLSLCKERALLRASRIDDKLAKGDPIGILAGIPIGVKDNIHITGVKTTCASKMLENFVAPFDATVVRRIEMEDGILLGKLNMDEFAMGSTTRYSAFQHTNNPWDLERVPGGSSGGSAAAVSARFCPIALGSDTG 174
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CHLAA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=gatA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.535e-32 Identity = 62/158 (39.24%), Postives = 105/158 (66.46%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++TA +L E L+R+ EP +++F+H++ + L A++ D++ ++ ++GPL G+ + +KD ICT +P+TAGSR+L +RPP++AT ++++ ++VGK N DEF MGS+TE+S++Q+T NPWD +RVP Q +LG+DTG Sbjct: 20 DITAVELTEACLARINATEPTIRAFLHLTPDAALAAARAADERRQQGRSLGPLDGIPIAIKDVICTDGVPTTAGSRILAGFRPPYNATVIERLVAAGAVLVGKLNCDEFAMGSSTENSAYQITTNPWDPTRVPGGSSGGSAAAVAAGQVPATLGTDTG 177 The following BLAST results are available for this feature:
BLAST of FC920234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920234 ID=FC920234; Name=FC920234; organism=Citrus clementina; type=EST; length=697bpback to top |