FC920234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CYAP4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=gatA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.610e-30 Identity = 58/159 (36.48%), Postives = 104/159 (65.41%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E +A ++ + L +++ EP++ +F+ ++ L +A+ +D +I +G LAG+ + +KDN+CT +P+T GS++L+ + PP+++T ++ ++VGKTNLDEF MGS+TE+S++Q+TANPWD+ RVP + +++LGSDTG Sbjct: 14 KERSAKEITQDALEKIQQLEPKVHAFLTLTAEQALAQAERVDQQIATGTEIGLLAGIPIAIKDNLCTKGIPTTCGSKILQGFIPPYESTVTSRLAAAGAVMVGKTNLDEFAMGSSTENSAYQLTANPWDLQRVPGGSSGGSAAAVAAGETLIALGSDTG 172
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CHLTR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydia trachomatis GN=gatA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.610e-30 Identity = 65/159 (40.88%), Postives = 99/159 (62.26%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 RE++ T + E + R++ + Q+ +F+ + L A IDDK+ + + +G LAG+ +GVKDNI + +T S++LEN+ PFD+T V++++ DGI++GK N+DEF MGSTT S+F T NPWD+ RVP R C ++LGSDTG Sbjct: 16 RELSVTAITEYFYHRIESHDEQIGAFLSLCKERALLRASRIDDKLAKGDPIGLLAGIPIGVKDNIHITGVKTTCASKMLENFVAPFDSTVVRRIEMEDGILLGKLNMDEFAMGSTTRYSAFHPTNNPWDLERVPGGSSGGSAAAVSARFCPIALGSDTG 174
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CHLTB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=gatA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.610e-30 Identity = 65/159 (40.88%), Postives = 99/159 (62.26%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 RE++ T + E + R++ + Q+ +F+ + L A IDDK+ + + +G LAG+ +GVKDNI + +T S++LEN+ PFD+T V++++ DGI++GK N+DEF MGSTT S+F T NPWD+ RVP R C ++LGSDTG Sbjct: 16 RELSVTAITEYFYHRIESHDEQIGAFLSLCKERALLRASRIDDKLAKGDPIGLLAGIPIGVKDNIHITGVKTTCASKMLENFVAPFDSTVVRRIEMEDGILLGKLNMDEFAMGSTTRYSAFHPTNNPWDLERVPGGSSGGSAAAVSARFCPIALGSDTG 174
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CHLTA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=gatA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.610e-30 Identity = 65/159 (40.88%), Postives = 99/159 (62.26%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 RE++ T + E + R++ + Q+ +F+ + L A IDDK+ + + +G LAG+ +GVKDNI + +T S++LEN+ PFD+T V++++ DGI++GK N+DEF MGSTT S+F T NPWD+ RVP R C ++LGSDTG Sbjct: 16 RELSVTAITEYFYHRIESHDEQIGAFLSLCKERALLRASRIDDKLAKGDPIGLLAGIPIGVKDNIHITGVKTTCASKMLENFVAPFDSTVVRRIEMEDGILLGKLNMDEFAMGSTTRYSAFHPTNNPWDLERVPGGSSGGSAAAVSARFCPIALGSDTG 174
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CHLT2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=gatA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.610e-30 Identity = 65/159 (40.88%), Postives = 99/159 (62.26%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 RE++ T + E + R++ + Q+ +F+ + L A IDDK+ + + +G LAG+ +GVKDNI + +T S++LEN+ PFD+T V++++ DGI++GK N+DEF MGSTT S+F T NPWD+ RVP R C ++LGSDTG Sbjct: 16 RELSVTAITEYFYHRIESHDEQIGAFLSLCKERALLRASRIDDKLAKGDPIGLLAGIPIGVKDNIHITGVKTTCASKMLENFVAPFDSTVVRRIEMEDGILLGKLNMDEFAMGSTTRYSAFHPTNNPWDLERVPGGSSGGSAAAVSARFCPIALGSDTG 174
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_DESAP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulforudis audaxviator (strain MP104C) GN=gatA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.102e-30 Identity = 62/159 (38.99%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 REV+A +L + L+R+ E ++K+++ + L++A ++D +++ + PLAG+ +KDNIC +P+T S++L N+ PP+DAT V+K+K+ +++GKTN+DEF MGS+TE S+F T NPWD RVP + +LGSDTG Sbjct: 18 REVSAAELCRSVLNRIDEVEGRVKAYVTLDREGALRQAAAVDRELQNGRELPPLAGIPFAIKDNICLRGLPATCSSKILHNWVPPYDATVVEKLKDQQTVILGKTNMDEFAMGSSTEHSAFFTTRNPWDPKRVPGGSSGGSAAAVAAGSAICALGSDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_THET8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=gatA PE=3 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30 Identity = 69/157 (43.95%), Postives = 103/157 (65.61%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 EV+ ++A+ YL R++ +P L +F+ ++ +L+EA+++D + PLAG++V VKDNI T + +TAGSR+LEN+ PP++ATAV ++K +V+GKTNLDEFGMGS+TE S+F T NP+D RVP ++LGSDTG Sbjct: 14 EVSPLEVAQAYLKRVQELDPGLGAFLSLNERLLEEAEAVDPGL-------PLAGLVVAVKDNIATRGLRTTAGSRLLENFVPPYEATAVARLKALGALVLGKTNLDEFGMGSSTEHSAFFPTKNPFDPDRVPGGSSGGSAAALAADLAPLALGSDTG 163
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_THET2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=gatA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30 Identity = 69/157 (43.95%), Postives = 103/157 (65.61%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 EV+ ++A+ YL R++ +P L +F+ ++ +L+EA+++D + PLAG++V VKDNI T + +TAGSR+LEN+ PP++ATAV ++K +V+GKTNLDEFGMGS+TE S+F T NP+D RVP ++LGSDTG Sbjct: 14 EVSPLEVAQAYLKRVQELDPGLGAFLSLNERLLEEAEAVDPGL-------PLAGLVVAVKDNIATRGLRTTAGSRLLENFVPPYEATAVARLKALGALVLGKTNLDEFGMGSSTEHSAFFPTKNPFDPDRVPGGSSGGSAAALAADLAPLALGSDTG 163
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_PROM2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9215) GN=gatA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30 Identity = 62/153 (40.52%), Postives = 100/153 (65.36%), Query Frame = 3 Query: 240 QLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +L + ++K +P++ S+I + +N +++A++ID I+ E + PLAG+ + +KDNICT + +T S++L+++ PP+++TA K+ GI +GKTNLDEF MGS+TE+S F VT+NPWDI+RVP C ++GSDTG Sbjct: 19 ELVNDFFDKIKHKDPEINSYICTTKDNAIEQAENIDKLIQNKEKLPPLAGIPIAIKDNICTKGVATTCASKMLKSFVPPYESTASSKLWSSGGICLGKTNLDEFAMGSSTETSLFGVTSNPWDINRVPGGSSGGSAASVAAGFCAAAIGSDTG 171
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CLOTE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium tetani GN=gatA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30 Identity = 59/159 (37.11%), Postives = 104/159 (65.41%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +EV ++ ++YL+R++ + ++ +F++ S +K+A+ +D+KI + E++ L G+ V +KDNI M +T S++LE Y+ P+DA ++K+K DGI++GK N+DEF MGS+TE+S+++ T NPWD+ RVP + ++LG+DTG Sbjct: 18 KEVKVEEVVQSYLNRIEKVDSKVGAFLYTGSEEAIKKAKELDNKISKGESLKALGGIPVSIKDNISVKGMQNTCASKMLEGYKSPYDAHVIEKIKNEDGIILGKVNMDEFAMGSSTENSAYKKTRNPWDLDRVPGGSSGGSAAAVAAMETPLALGTDTG 176 The following BLAST results are available for this feature:
BLAST of FC920234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920234 ID=FC920234; Name=FC920234; organism=Citrus clementina; type=EST; length=697bpback to top |