FC920234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CHLAB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydophila abortus GN=gatA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.684e-30 Identity = 66/158 (41.77%), Postives = 100/158 (63.29%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 E +AT +A+ + +R+K + Q+ +F+ + ++A ID K+ R E +G LAGV +G+KDNI + +T S++LENY PFDAT V++++ DG+++GK N+DEF MGSTT+ S+F T NPW +S VP R C ++LGSDTG Sbjct: 17 ESSATAIAKYFYNRIKTEDNQIGAFLSLCEERAYEKAAIIDAKVARGEPLGKLAGVPIGIKDNIHIRGLRTTCASKMLENYIAPFDATVVERIEAEDGVILGKLNMDEFAMGSTTQYSAFHPTKNPWGLSCVPGGSSGGSAAAVSARFCPIALGSDTG 174
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_SALTO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=gatA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 62/158 (39.24%), Postives = 102/158 (64.56%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 E +A ++ + +L R+ + ++ +F+HV + L A+ +D + E +GPLAGV V VKD + T +P+TAGS++L ++RPP+D+T V++++ +++GKTN+DEF MGS+TE S+F T NPWD+SR+P + +S+GSDTG Sbjct: 20 ESSAVEVTQAHLDRISAVDDRVHAFLHVDTEGALDAARDVDSRRAAGEPLGPLAGVPVAVKDVLTTKGVPTTAGSKILADWRPPYDSTIVRRLRAAGTVMLGKTNMDEFAMGSSTEYSAFGPTHNPWDLSRIPGGSGGGSSAALAAYETPLSIGSDTG 177
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_SALAI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinispora arenicola (strain CNS-205) GN=gatA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 63/158 (39.87%), Postives = 102/158 (64.56%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 E +A ++ + +L R+ + ++ +F+HV + L A+++D + E +GPLAGV V VKD + T +P+TAGSR+L +RPP+D+T V++++ +++GKTN+DEF MGS+TE S+F T NPWD+SR+P + +S+GSDTG Sbjct: 20 ESSAAEVTQAHLDRITAVDDRVHAFLHVDTEGALDAARAVDARRAAGEPLGPLAGVPVAVKDVLTTKGIPTTAGSRILAGWRPPYDSTIVRRLRAAGTVMLGKTNMDEFAMGSSTEYSAFGPTHNPWDLSRIPGGSGGGSAAALAAYETPLSIGSDTG 177
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_PERMH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=gatA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 63/159 (39.62%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFI-HVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +EV +++ E++ R K E ++KS++ ++ ++ A+ +D+KI + L G+ + +KDNI T + +T S++LENY PPFDAT +K++K+ + ++ GKTNLDEF MGS+TE+S+F VT NPWD+ RVP +LGSDTG Sbjct: 18 KEVKPSEVIESFAQRTKDVEVKIKSYVTDLTEQAVERAKQLDEKISDLSEIPELFGIPIAIKDNISTEGIRTTCSSKILENYVPPFDATVIKRLKDKEYVITGKTNLDEFAMGSSTENSAFFVTRNPWDLDRVPGGSSGGSAAAVSAGLAPAALGSDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_DESAA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfatibacillum alkenivorans (strain AK-01) GN=gatA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.043e-29 Identity = 60/158 (37.97%), Postives = 95/158 (60.13%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E+++ L + L R++ EPQ+ +++ VS EA DK PL G+ + +KD +CT + +T S++L N+ PP+DAT++ K+KE ++VGKTN+DEF MGS+TE+S+F+ T NPWD++R P C+ + GSDTG Sbjct: 18 KEISSQDLTKAVLDRIEAVEPQVDAYLTVSKEEAMEAAQKADKALAQGETAPLCGIPLAIKDVMCTKGVLTTCASKILGNFVPPYDATSITKLKEAGAVLVGKTNMDEFAMGSSTENSAFKTTKNPWDLTRTPGGSSGGSAAAVAADMCLGAFGSDTG 175
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_SYNP2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=gatA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29 Identity = 60/159 (37.74%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E +A ++ + ++ EP++K+F+ ++ L +A +D KI E +G L G+ + +KDN+CT + +T SR+LE + P +++T ++++E I+VGKTNLDEF MGS+TE+S +QVT NPWD++RVP + ++LGSDTG Sbjct: 14 KERSAVEILTETFAHIEAVEPKVKAFLTLTKEQALAQAAQVDAKIAAGETIGLLEGIPIAIKDNLCTKGIQTTCASRILEGFVPTYESTVTQELQEAGAIMVGKTNLDEFAMGSSTENSGYQVTGNPWDVTRVPGGSSGGSAAAVAAGEAPIALGSDTG 172
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_PROMT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain NATL2A) GN=gatA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29 Identity = 61/158 (38.61%), Postives = 102/158 (64.56%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 EV++ +L + ++R+ +P L SF+ V+ + L +A+ ID +I +++ PL+G+ + +KDN+CT + +T S++L+N+ PP+++T KK+ I++GKTN+DEF MGS+TE+S+F T NPW+I++VP C SLGSDTG Sbjct: 14 EVSSKELVQEKINRINELDPTLNSFLIVNTELALSKAEHIDKQIASGDHLPPLSGIPIAIKDNLCTKGIKTTCASKILDNFVPPYESTVTKKLLNAGAIMIGKTNMDEFAMGSSTETSAFGPTLNPWNITKVPGGSSGGSAASVAAGLCYGSLGSDTG 171
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_PROM1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain NATL1A) GN=gatA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29 Identity = 61/158 (38.61%), Postives = 102/158 (64.56%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 EV++ +L + ++R+ +P L SF+ V+ + L +A+ ID +I +++ PL+G+ + +KDN+CT + +T S++L+N+ PP+++T KK+ I++GKTN+DEF MGS+TE+S+F T NPW+I++VP C SLGSDTG Sbjct: 14 EVSSKELVQEKINRINELDPTLNSFLIVNTELALSKAEHIDKQIASGDHLPPLSGIPIAIKDNLCTKGIKTTCASKILDNFVPPYESTVTKKLLNAGAIMIGKTNMDEFAMGSSTETSAFGPTLNPWNITKVPGGSSGGSAASVAAGLCYGSLGSDTG 171
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CLOBA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=gatA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29 Identity = 56/159 (35.22%), Postives = 104/159 (65.41%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +EV+ ++ + +L +K + ++ +F++++ L +A+++D+K+ + E++G L G +G+KDNI +M +T S++LE Y P+DAT + VK G+++GK N+DEF MGS+TE+S++++T NPWD+ RVP ++ ++LG+DTG Sbjct: 18 KEVSVEEVTKAHLENVKNIDAKVNAFLYIAEEEALNDAKALDEKLSKGEDIGLLGGAPLGIKDNISVKNMQNTCASKILEGYISPYDATVSESVKSQGGVILGKLNMDEFAMGSSTENSAYKITRNPWDLDRVPGGSSGGSAAAVASKEVPLALGTDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_ALKMQ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Alkaliphilus metalliredigens (strain QYMF) GN=gatA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29 Identity = 60/159 (37.74%), Postives = 101/159 (63.52%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++ T + + Y+ R+K + ++ +FI + + L EA +D+K+ R E +G L G+ V +KDN+CT + ++ S +L ++ PP+DAT VKK++ I++GKTN+DEF MGS+TE+S+F+VT NPWD+++VP +++GSDTG Sbjct: 18 KQFTVKDVVQGYIDRIKELDGKINAFITLCEESALMEAAVLDEKLSRGEEIGLLGGIPVAIKDNMCTQGIKTSCASEMLADFIPPYDATIVKKLRAAGAIIIGKTNMDEFAMGSSTENSAFKVTKNPWDLTKVPGGSSGGSAAALAAGFAPLTIGSDTG 176 The following BLAST results are available for this feature:
BLAST of FC920234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920234 ID=FC920234; Name=FC920234; organism=Citrus clementina; type=EST; length=697bpback to top |