FC920234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BDEBA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bdellovibrio bacteriovorus GN=gatA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29 Identity = 63/158 (39.87%), Postives = 99/158 (62.66%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 R ++A ++ +L R++ P+L +F ++ ++EA+++D +I E+VG LAGV G+K+ CT + +TAGS++LEN+ PP+DATAV ++K+ +V+GK N DEF MGS+ E+S V NPWD+ RVP R +LG+DTG Sbjct: 18 RSISAKEVTLHFLKRIENLNPKLNAFTSLNPQAVQEAEAVDARIANGEDVGLLAGVPFGIKEMFCTKGLTTTAGSKILENFVPPYDATAVARLKKSGIVVMGKLNQDEFAMGSSNETSFHGVVKNPWDLERVPGGSSGGSAAAQASRLVAGTLGTDTG 175
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_THETN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter tengcongensis GN=gatA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.036e-29 Identity = 61/158 (38.61%), Postives = 99/158 (62.66%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 REV+A ++ ++YL R+K EP++ + + ++ E + D++ +N L G+ V +KDNI T + +T S++LENY PP++AT V+++ +++GK+NLDEF MGS+TE+S+F+ T NPWD+SRVP + +LGSDTG Sbjct: 18 REVSAQEVTKSYLERIKEVEPKIDALVTITEEFALERAKVADEMIKNGEAKDLTGIPVIIKDNISTEGIRTTCSSKMLENYIPPYNATVVERLLNEGVVILGKSNLDEFAMGSSTENSAFKTTKNPWDLSRVPGGSSGGSAAAVAADEAAFALGSDTG 175
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_SYNS9 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain CC9902) GN=gatA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.965e-29 Identity = 60/158 (37.97%), Postives = 99/158 (62.66%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++++ +L + ++ RL+ AEP L + ++ +A ID E++GPLAG+ + +KDN+CT + +T SR+LE++ PP+++TA +++ + G++VGKTNLDEF MG +TE+S+F T NPW++ VP C+ SLGSDTG Sbjct: 19 DISSRELVDQHIERLETAEPSLSVYNEITVERARADADRIDAARAAGESLGPLAGLPLAIKDNLCTRGVRTTCSSRMLEHFVPPYESTATERLWQAGGVLVGKTNLDEFAMGGSTETSAFGATHNPWNLDHVPGGSSGGSAAAVASGSCIASLGSDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_FRASC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Frankia sp. (strain CcI3) GN=gatA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.965e-29 Identity = 61/157 (38.85%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 228 VTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++A + L R+ + + +F+HV ++ L A+S+DD+ E +GPLAGV + +KD T MP+T GSR+LE + PP+DAT V +++ D +++GK N+DEF MGS+TE+S+F T NPWD++R+P + ++LG+DTG Sbjct: 34 LSAVEATRAALDRIAKVDETVHAFLHVDADGALAAARSVDDRRAAGERLGPLAGVPLALKDVFTTRGMPTTCGSRILEGWHPPYDATVVSRLRAADVVLLGKANMDEFAMGSSTENSAFGPTRNPWDVTRIPGGSSGGSAAAVAAFEAPLALGTDTG 190
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CLOBB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=gatA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.965e-29 Identity = 55/159 (34.59%), Postives = 103/159 (64.78%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E + ++ + +L +K + ++ +F++++ L +A+++D+K+ + E++G L G +G+KDNI +M +T S++LE Y P+DAT + VK G+++GK N+DEF MGS+TE+S++++T NPWD+ RVP ++ ++LG+DTG Sbjct: 18 KEASVEEVTKAHLENVKNIDEKVNAFLYIAEEEALNDAKALDEKLSKGEDIGLLGGAPLGIKDNISVKNMQNTCASKILEGYISPYDATVSESVKSQGGVILGKLNMDEFAMGSSTENSAYKITRNPWDLDRVPGGSSGGSAAAVASKEVPLALGTDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_TROWT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Tropheryma whipplei (strain Twist) GN=gatA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.763e-29 Identity = 59/159 (37.11%), Postives = 105/159 (66.04%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKE-AQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +EV+A ++AE+++ ++ ++ ++ +F++ + ++ A+ +D+++K + PLAGV + VKD I T DMP+TAGS++LE + PP++AT ++++ ++GKTN DEFGMGS+TE S+++ T NPWD+SR Q ++LG+DTG Sbjct: 48 KEVSALEVAESFIDNIEASDSRICAFLYTDFSYTRDVARRVDEELKSATKLSPLAGVPIAVKDMILTRDMPTTAGSKILEGWIPPYNATVIERISRARMPILGKTNQDEFGMGSSTEYSAYKTTRNPWDLSRTAGGSGGGSSAAVSASQAPLALGTDTG 206
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_TROW8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Tropheryma whipplei (strain TW08/27) GN=gatA PE=3 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 6.763e-29 Identity = 59/159 (37.11%), Postives = 105/159 (66.04%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKE-AQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +EV+A ++AE+++ ++ ++ ++ +F++ + ++ A+ +D+++K + PLAGV + VKD I T DMP+TAGS++LE + PP++AT ++++ ++GKTN DEFGMGS+TE S+++ T NPWD+SR Q ++LG+DTG Sbjct: 48 KEVSALEVAESFIDNIEASDSRICAFLYTDFSYTRDVARRVDEELKSATKLSPLAGVPIAVKDMILTRDMPTTAGSKILEGWIPPYNATVIERISRARMPILGKTNQDEFGMGSSTEYSAYKTTRNPWDLSRTAGGSGGGSSAAVSASQAPLALGTDTG 206
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_THEFY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermobifida fusca (strain YX) GN=gatA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.763e-29 Identity = 61/158 (38.61%), Postives = 100/158 (63.29%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 E +A + + YL R+ + Q+ +F+HV+ + L++A+++D + E +GPLAGV V KD T DMP+TA S++LE ++ P+DAT +++++ +++GKTNLDEF MGS+TE+S++ T NPWD RVP + ++ G+DTG Sbjct: 20 ETSAVEATQAYLDRIAEVDGQIHAFLHVAADKALEQARAVDARRAAGEKLGPLAGVPVAHKDVFTTKDMPTTAASKILEGWQSPYDATVTERLRDAGLVILGKTNLDEFAMGSSTENSAYGPTRNPWDTDRVPGGSSGGSSAAVAAFEAPLATGTDTG 177
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_MOOTA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Moorella thermoacetica (strain ATCC 39073) GN=gatA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.154e-28 Identity = 59/159 (37.11%), Postives = 101/159 (63.52%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFI-HVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E+++ + + R++ + ++++++ + L+EA+++D R E +GPLAGV + +KDN+CT + +T SR+L ++ PP+DAT V+++KE +++GK N+DEF MGS+TE+SSF T NPWD+ RVP + +LGSDTG Sbjct: 18 KEISSEEATAAIIDRIEAVDGRVQAYLTRTAEQALEEARAVDAARARGETLGPLAGVPMALKDNLCTEGVRTTCSSRMLADWVPPYDATVVRRLKEAGAVMLGKLNMDEFAMGSSTENSSFFPTRNPWDLERVPGGSSGGAVAAVAAGEAYFALGSDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_DESAH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=gatA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.154e-28 Identity = 64/158 (40.51%), Postives = 98/158 (62.03%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 E+++ L L R+K + L +FI V + L+ A + D++I R E+ PL G+ + +KD +CT + +T S++LEN+ P +DATAV +K+ ++VGKTNLDEFGMGS+TE+S+F +T NPW++ VP R C +LG+DTG Sbjct: 19 EISSKDLTTCLLDRIKTHDADLGAFITVDAAGALEAATAADERIARGEDA-PLLGIPLALKDLLCTSGVRTTCASKILENFVPTYDATAVTLLKQAGAVIVGKTNLDEFGMGSSTENSAFHLTRNPWNLDHVPGGSSGGSAAAVAARMCTAALGTDTG 175 The following BLAST results are available for this feature:
BLAST of FC920234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920234 ID=FC920234; Name=FC920234; organism=Citrus clementina; type=EST; length=697bpback to top |