FC920234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BIFLI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=gatA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.725e-28 Identity = 65/159 (40.88%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGP-LAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +VT+ +L E +L ++ AEP +K+F+ VS +V L++A + D K ++ P LAGV + +KD I T + +TA S++LE + PP+DAT ++K+K ++GKTNLDEF GS+TE S++Q T NPWD RVP + ++LG+DTG Sbjct: 24 DVTSRELVEAHLKVIEAAEPSIKAFLKVSGDVALEQADAFDAKSAEDKAALPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNLDEFAQGSSTEHSAYQTTHNPWDTERVPGGSGGGSASAVAAFEAPIALGTDTG 182
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BIFLD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bifidobacterium longum (strain DJO10A) GN=gatA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.725e-28 Identity = 65/159 (40.88%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGP-LAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +VT+ +L E +L ++ AEP +K+F+ VS +V L++A + D K ++ P LAGV + +KD I T + +TA S++LE + PP+DAT ++K+K ++GKTNLDEF GS+TE S++Q T NPWD RVP + ++LG+DTG Sbjct: 24 DVTSRELVEAHLKVIEAAEPSIKAFLKVSGDVALEQADAFDAKSAEDKAALPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNLDEFAQGSSTEHSAYQTTHNPWDTERVPGGSGGGSASAVAAFEAPIALGTDTG 182
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_PROMS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain AS9601) GN=gatA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.477e-28 Identity = 61/153 (39.87%), Postives = 95/153 (62.09%), Query Frame = 3 Query: 240 QLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +L + ++ + ++ S+I + +N + +A+ ID I+ NE + PLAG+ + +KDNICT + +T S +L+N+ P+++TA K+ GI +GKTNLDEF MGS+TE+S F VT+NPWDI+RVP C ++GSDTG Sbjct: 19 ELVNDFFVKIDHKDSKINSYICTTKDNAIAQAEDIDKLIQNNEKLPPLAGMPIAIKDNICTKGVATTCASNMLKNFVAPYESTASSKLWSSGGICLGKTNLDEFAMGSSTETSVFGVTSNPWDINRVPGGSSGGSAASVAAGFCAAAIGSDTG 171
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_PROM0 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9301) GN=gatA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.477e-28 Identity = 61/153 (39.87%), Postives = 96/153 (62.75%), Query Frame = 3 Query: 240 QLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +L + + +P++ S+I + +N + +A++ID I+ E + PLAG+ + +KDNICT + +T S++L+N+ P+++TA K+ GI +GKTNLDEF MGS+TE+S F VT+NPWDI+RVP C ++GSDTG Sbjct: 19 ELVNDIFTNIDHKDPEINSYICTTKDNAIAQAENIDKLIQFKEKLPPLAGMPIAIKDNICTKGVATTCASKMLKNFVAPYESTASSKLWSSGGICLGKTNLDEFAMGSSTETSLFGVTSNPWDINRVPGGSSGGSAASVAAGFCAAAIGSDTG 171
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_METMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina mazei GN=gatA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.477e-28 Identity = 61/158 (38.61%), Postives = 98/158 (62.03%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E +A ++ YL +K + ++ ++ +S+ L++A+ ID + + GPLAGV + +KDNI V +P++ GS++LE Y PPF+A ++K+ +++GKTN+DEF MGS+TE+S F TANPWD+ RVP + +LGSDTG Sbjct: 16 KESSAEEVTSRYLEVIK--KSKINGYLTISDKALEQAKKID----KEGHEGPLAGVPIAIKDNISVVGLPNSCGSKILEGYVPPFNAHVIEKLLSAGAVILGKTNMDEFAMGSSTETSHFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTG 167
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_SYNFM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=gatA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.766e-28 Identity = 62/159 (38.99%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E++ T+ ++L+R++ +P+L S++ V + + L EA D + +R+ + PLAG+ + +KD +C +T GSR+LEN+ PP+D T + +++E I +GKTN+DEF MGS+TE+S++ VT NPWD RVP C SLG+DTG Sbjct: 18 KELSVTETLTSFLTRIETLDPRLNSYLSVLAESSLAEAGRFD-RGERDLHASPLAGIPLAIKDVLCMQGTVTTCGSRILENFVPPYDGTVIARLREAGAIFLGKTNMDEFAMGSSTENSAYGVTRNPWDRERVPGGSSGGSAAAVAADLCSGSLGTDTG 175
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_DEHE1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides ethenogenes (strain 195) GN=gatA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.766e-28 Identity = 61/159 (38.36%), Postives = 103/159 (64.78%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 R++++ +L +L R++ EP++K+F+ V + L +A++ D+ IK+ ++ PL G+ + +KD +CT + +T SR+LEN+ PP++A V K+ E +++GKTN+DEF MGS+TE+S+F T NPW+ ++VP + V SLGSDTG Sbjct: 19 RKLSSAELTRAHLDRIEKLEPEIKAFMTVCPESALAQAKAADEAIKQG-HIRPLTGIPMALKDVLCTKGIRTTCSSRMLENFVPPYNAHVVDKLAEEGAVLLGKTNMDEFAMGSSTENSAFFTTHNPWNTAKVPGGSSGGSAACVAASEAVFSLGSDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_SYNPW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain WH7803) GN=gatA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.275e-27 Identity = 58/158 (36.71%), Postives = 98/158 (62.03%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 EV+A +L + +L+R++ EP + +F+ V+ +A +D+ E++ PLAG+ + +KDN+CT + +T SR+LE + PP+++T +++ +++GKTNLDEF MG +TE+S+F TANPW+ VP +C+ S+GSDTG Sbjct: 14 EVSARELTDHHLARIEAVEPGIHAFLEVTAERARADADRVDEARASGEDLPPLAGIPLAIKDNLCTRGVRTTCSSRMLEQFVPPYESTVTERLWAAGAVLLGKTNLDEFAMGGSTETSAFGPTANPWNPEHVPGGSSGGSAAAVASGECLASIGSDTG 171
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_SYNAS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Syntrophus aciditrophicus (strain SB) GN=gatA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.275e-27 Identity = 61/157 (38.85%), Postives = 94/157 (59.87%), Query Frame = 3 Query: 228 VTATQLAETYLSRLKLAEPQLKSFIHVSN-NVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 VT+T + + R+ E + S+I + + L+EAQ D++I+ E + L G+ V +KD CT + +T GS +L+N+ PP+DAT V K++E + GKTN+DEF MGS+TE+S + T NPWD+ R+P +C+ +LGSDTG Sbjct: 20 VTSTAIVNSVFGRIDAVEENVHSYITLMRESALEEAQKADEQIRTGE-INALTGIPVALKDIYCTRGVRTTCGSLILDNFIPPYDATVVVKLREAGAVFTGKTNMDEFAMGSSTETSYYGFTRNPWDLERIPGGSSGGSAAAVAADECIAALGSDTG 175
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_PROM9 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9312) GN=gatA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.275e-27 Identity = 61/159 (38.36%), Postives = 99/159 (62.26%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++ + +L ++ +P++ S+I + +N +++A++ID I+ E + PLAG+ + +KDNICT + +T S++L+ + P+++TA K+ GI +GKTNLDEF MGS+TE+S F VT+NPWDISRVP C ++GSDTG Sbjct: 13 KKASVKELVNDIFLKIDSDDPEINSYICTTKDNAIQQAENIDKLIQNEEILPPLAGMPIAIKDNICTKGVHTTCASKMLKGFIAPYESTASDKLWSSGGICLGKTNLDEFAMGSSTETSVFGVTSNPWDISRVPGGSSGGSAASVAAGLCSAAIGSDTG 171 The following BLAST results are available for this feature:
BLAST of FC920234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920234 ID=FC920234; Name=FC920234; organism=Citrus clementina; type=EST; length=697bpback to top |