FC920235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920235 vs. ExPASy Swiss-Prot
Match: RL3_DICDI (60S ribosomal protein L3 OS=Dictyostelium discoideum GN=rpl3 PE=1 SV=2) HSP 1 Score: 257.299 bits (656), Expect = 5.707e-68 Identity = 130/205 (63.41%), Postives = 155/205 (75.61%), Query Frame = 1 Query: 40 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWC-XXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEK 651 MSHRKFE PRHG+LGF PRKRAARH+GKVK+FPKDD ++ LTAF+GYKAGMTH+VRD+EKPGSK+HKKE EAVTIIE YV+T +GL++ TVWAQHLS+ RRR YKNW QYET+EGKKSI+A L+ IKK SVVRV+AHTQ+ K+K L QKKAH++EIQVNGG+I EKV++A FEK Sbjct: 1 MSHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDLEKPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYKNWYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVVRVIAHTQVHKLK-LTQKKAHVLEIQVNGGSIVEKVNFAVANFEK 204
BLAST of FC920235 vs. ExPASy Swiss-Prot
Match: RL3_MACFA (60S ribosomal protein L3 OS=Macaca fascicularis GN=RPL3 PE=2 SV=3) HSP 1 Score: 255.758 bits (652), Expect = 6.169e-68 Identity = 123/205 (60.00%), Postives = 156/205 (76.10%), Query Frame = 1 Query: 40 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQ 654 MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V++PGSK++KKE AVTI+ET YV+TPRGLR+ TV+A+H+S+E +RRFYKNW +++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHLMEIQVNGGT+AEK+D+A E+Q Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQ 204 HSP 2 Score: 23.483 bits (49), Expect = 6.169e-68 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 654 IPVDAVFQKDEMID 695 +PV+ VF +DEMID Sbjct: 205 VPVNQVFGQDEMID 218
BLAST of FC920235 vs. ExPASy Swiss-Prot
Match: RL3_MOUSE (60S ribosomal protein L3 OS=Mus musculus GN=Rpl3 PE=2 SV=2) HSP 1 Score: 255.373 bits (651), Expect = 8.045e-68 Identity = 123/205 (60.00%), Postives = 155/205 (75.61%), Query Frame = 1 Query: 40 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQ 654 MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVTI+ET YV+TPRGLR+ TV+A+H+S+E +RRFYKNW +++ D GKK ++ +KKY V+R++AHTQ+R + L+QKKAHLMEIQVNGGT+AEK+D+A E+Q Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQ 204 HSP 2 Score: 23.483 bits (49), Expect = 8.045e-68 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 654 IPVDAVFQKDEMID 695 +PV+ VF +DEMID Sbjct: 205 VPVNQVFGQDEMID 218
BLAST of FC920235 vs. ExPASy Swiss-Prot
Match: RL3_DEBHA (60S ribosomal protein L3 OS=Debaryomyces hansenii GN=RPL3 PE=3 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 3.034e-67 Identity = 126/204 (61.76%), Postives = 153/204 (75.00%), Query Frame = 1 Query: 40 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEK 651 MSHRK+E PRHGSLGFLPRKR+A RG+VK+FPKD SKP LTAFLGYKAGMT +VRD+++PGSK+HK+E EA T+++T YV+TPRGLRSL TVWA+HLSEEVRRRFYKNW +Y D + ++ +L +IKKYASVVRVLAHTQI+K L QKKAHL EIQVNGG++++KVD+A FEK Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRSANIRGRVKSFPKDVKSKPVALTAFLGYKAGMTTVVRDLDRPGSKMHKREIVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYKNWYKSKKKAFTKYSAKYAQDGAQ--VERELARIKKYASVVRVLAHTQIKKTP-LAQKKAHLAEIQVNGGSVSDKVDWAKEHFEK 201 HSP 2 Score: 27.7202 bits (60), Expect = 3.034e-67 Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 648 KAIPVDAVFQKDEMID 695 K + VD+VF+KDEM+D Sbjct: 201 KTVSVDSVFEKDEMVD 216
BLAST of FC920235 vs. ExPASy Swiss-Prot
Match: RL3_BOVIN (60S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=2 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 5.159e-67 Identity = 121/205 (59.02%), Postives = 155/205 (75.61%), Query Frame = 1 Query: 40 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQ 654 MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVTI+ET YV+TPRGLR+ T++A+H+S+E +RRFYKNW +++ +GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHLME+QVNGGT+AEK+D+A E+Q Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEVQVNGGTVAEKLDWARERLEQQ 204 HSP 2 Score: 23.0978 bits (48), Expect = 5.159e-67 Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 654 IPVDAVFQKDEMID 695 +PV VF +DEMID Sbjct: 205 VPVSQVFGQDEMID 218
BLAST of FC920235 vs. ExPASy Swiss-Prot
Match: RL3_CAEEL (60S ribosomal protein L3 OS=Caenorhabditis elegans GN=rpl-3 PE=1 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 3.308e-66 Identity = 120/205 (58.54%), Postives = 151/205 (73.66%), Query Frame = 1 Query: 40 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQ 654 MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV+KPGSK++KKE EAVTI+ET YV TP+G R+L T+WA+HLSEE RRRFY NW +++ ++GKK I+A K+KKY S +RV+AHTQ++ ++ +QKKAHL+EIQVNGGTI +KVD+A EKQ Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQ 204 HSP 2 Score: 24.6386 bits (52), Expect = 3.308e-66 Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 3 Query: 648 KAIPVDAVFQKDEMID 695 K + VD VF +DEMID Sbjct: 203 KQVQVDTVFAQDEMID 218
BLAST of FC920235 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4) HSP 1 Score: 248.054 bits (632), Expect = 5.627e-66 Identity = 128/204 (62.75%), Postives = 150/204 (73.53%), Query Frame = 1 Query: 40 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEK 651 MSHRK+E PRHG LGFLPRKRAA R +VKAFPKDD SKP LT+FLGYKAGMT IVRD+++PGSK HK+E EAVT+++T YV+TPRGLRSL TVWA+HLS+EV+RRFYKNW +Y D I+ +L +IKKYASVVRVL HTQIRK L QKKAHL EIQ+NGG+I+EKVD+A FEK Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAHLAEIQLNGGSISEKVDWAREHFEK 201 HSP 2 Score: 24.6386 bits (52), Expect = 5.627e-66 Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 648 KAIPVDAVFQKDEMID 695 K + VD+VF+++EMID Sbjct: 201 KTVAVDSVFEQNEMID 216
BLAST of FC920235 vs. ExPASy Swiss-Prot
Match: RL3_CAEBR (60S ribosomal protein L3 OS=Caenorhabditis briggsae GN=rpl-3 PE=3 SV=2) HSP 1 Score: 246.899 bits (629), Expect = 7.335e-66 Identity = 118/205 (57.56%), Postives = 151/205 (73.66%), Query Frame = 1 Query: 40 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQ 654 MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV+KPGSK++KKE EAV+IIET Y+ TP+G R+L T+WA+HLSEE RRRFY NW +++ ++GKK I+A K+KKY S +RV+AHTQ++ ++ +QKKAHL+EIQ+NGGTI +KVD+A EKQ Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAHLVEIQINGGTIEQKVDWAREHLEKQ 204 HSP 2 Score: 25.409 bits (54), Expect = 7.335e-66 Identity = 11/16 (68.75%), Postives = 12/16 (75.00%), Query Frame = 3 Query: 648 KAIPVDAVFQKDEMID 695 K I VD VF +DEMID Sbjct: 203 KQIQVDTVFSQDEMID 218
BLAST of FC920235 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.627e-65 Identity = 124/204 (60.78%), Postives = 152/204 (74.51%), Query Frame = 1 Query: 40 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEK 651 MSHRK+E PRHG LGFLPRKRAA RG+VKAFPKDD SKP LT+FLGYKAGMT IVRD+++PGSK HK+E EAV++++T Y++TPRGLRSL TVWA+HLS+E++RRFYKNW +G +I+ +L +IKKYASVVRVLAHTQ+RK L QKKAHL EIQ+NGG+++EKVD+A FEK Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGRVKAFPKDDKSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREIVEAVSVVDTPPMVVVGVVGYIETPRGLRSLTTVWAEHLSDEIKRRFYKNWYKSKKKAFTQVPPPSTAQDG-AAIERELARIKKYASVVRVLAHTQVRKTP-LVQKKAHLAEIQLNGGSVSEKVDWAREHFEK 202 HSP 2 Score: 24.6386 bits (52), Expect = 1.627e-65 Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 648 KAIPVDAVFQKDEMID 695 K + VD+VF+++EMID Sbjct: 202 KTVSVDSVFEQNEMID 217
BLAST of FC920235 vs. ExPASy Swiss-Prot
Match: RL3_CANGA (60S ribosomal protein L3 OS=Candida glabrata GN=RPL3 PE=3 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.766e-65 Identity = 125/204 (61.27%), Postives = 151/204 (74.02%), Query Frame = 1 Query: 40 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEK 651 MSHRK+E PRHG LGFLPRKRAA RG+VK+FPKDD SKP LT+FLGYKAGMT IVRD+++PGSK HK+E EAVT+++T YV+TPRGLRSL TVWA+HLS+EV+RRFYKNW +Y + I+ +L +IKKYA+VVRVL HTQ+RK L QKKAHL EIQ+NGG+I+EKVD+A FEK Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYSAKYA--QNGAEIERELARIKKYATVVRVLVHTQVRKTP-LVQKKAHLAEIQLNGGSISEKVDWAREHFEK 201 HSP 2 Score: 24.6386 bits (52), Expect = 2.766e-65 Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 648 KAIPVDAVFQKDEMID 695 K + VD+VF+++EMID Sbjct: 201 KTVSVDSVFEQNEMID 216 The following BLAST results are available for this feature:
BLAST of FC920235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920235 ID=FC920235; Name=FC920235; organism=Citrus clementina; type=EST; length=697bpback to top |