FC920236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_METB6 (Translation initiation factor 6 OS=Methanoregula boonei (strain 6A8) GN=eif6 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11 Identity = 46/138 (33.33%), Postives = 65/138 (47.10%), Query Frame = 2 Query: 215 FENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAG 628 F +GVF+++ ++ E F + L ++ T+I G+ IIG L AGN GL++ TD+EL L+ V + E ++A GN I ND A H DL E E I LGVEV T+ G Sbjct: 7 FAGDPNIGVFARVAGNIAVIPPEAPEEFRNAIREGLG--VELLVTTIQGSAIIGSLVAGNSRGLVVSGLATDEELAVLKKHRK----VMLLCETMNAAGNVIMANDTFAAVHPDLPAEVAEEIGAFLGVEVIHLTLGG 138
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_METAC (Translation initiation factor 6 OS=Methanosarcina acetivorans GN=eif6 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11 Identity = 49/137 (35.77%), Postives = 72/137 (52.55%), Query Frame = 2 Query: 233 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVG 643 +GVF+ T LV + E E+ DV V++T + G+ ++G L GN NG +LP+ E+Q + + V + +RL+A+GN + ND AL H DL + E IA L V+V+R TIAG VG Sbjct: 13 IGVFATCTEDVVLVPPLTKPEVCALLE-EVLDV-RVIETLVNGSIVVGALSRGNSNGFMLPYGAR-AEMQRFTD-----IPVGILPDRLNAVGNIVFANDSAALVHPDLSDKALEAIARTLKVDVYRGTIAGIKNVG 141
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_PICTO (Translation initiation factor 6 OS=Picrophilus torridus GN=eif6 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11 Identity = 47/150 (31.33%), Postives = 74/150 (49.33%), Query Frame = 2 Query: 197 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGS 646 M ++ NS +GV+++ N + + S+ FE L V K SIG + +IG + + N NG+++ D + +L++ + + I +L+A GN I NDH AL H + I DVLGVE + +IAG VGS Sbjct: 1 MIKKVSILNSNFIGVYARTWNDVTFLPVNISDEEKRIFEETLKT--EVYKISIGNSFLIGSMLSMNSNGIVV----ADHGIDNLKSLNINGRNILSINNKLNAAGNNIIANDHAALIHKSFPDSIRKKIEDVLGVETVKGSIAGIKTVGS 144 The following BLAST results are available for this feature:
BLAST of FC920236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920236 ID=FC920236; Name=FC920236; organism=Citrus clementina; type=EST; length=724bpback to top |