FC920240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920240 vs. ExPASy Swiss-Prot
Match: RAB9A_RAT (Ras-related protein Rab-9A OS=Rattus norvegicus GN=Rab9a PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.236e-21 Identity = 56/178 (31.46%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 142 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-----CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAG--DPNLHFVES 648 FK++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+F LR +Y C ++ F V +++N+ W ++ + E+ P V+ GNK D+K RQV ++ K N Y+E SAK + N F R++ D + H +++ Sbjct: 8 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSDHLIQT 185
BLAST of FC920240 vs. ExPASy Swiss-Prot
Match: RAB7A_DICDI (Ras-related protein Rab-7A OS=Dictyostelium discoideum GN=rab7A PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.753e-21 Identity = 52/163 (31.90%), Postives = 88/163 (53.99%), Query Frame = 1 Query: 145 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQV---KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 609 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C ++ +DV T++N+ +W + R +N P V+ GNK+D++N++V K K N+ Y+E SAK N E+ F +AR Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQIWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVLGNKIDLENQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIAR 172
BLAST of FC920240 vs. ExPASy Swiss-Prot
Match: RAB19_XENTR (Ras-related protein Rab-19 OS=Xenopus tropicalis GN=rab19 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.753e-21 Identity = 62/191 (32.46%), Postives = 100/191 (52.36%), Query Frame = 1 Query: 142 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDV-KNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGDPNLHF-----------VESPALAPPE 669 FK++++GD GKT V R +G F + TIGV+ + N K++ WDTAGQE+F + YY AII +D+T R ++++VP W + + N+ ++L GNK D+ + RQ+ ++ +K+ L E SAK ++N ++ FL +A++L H+ P LAPPE Sbjct: 16 FKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKELIARNTFHYHSESPRNSFMLDSKPVLAPPE 206
BLAST of FC920240 vs. ExPASy Swiss-Prot
Match: RBH1C_ARATH (Ras-related protein RABH1C OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21 Identity = 60/164 (36.59%), Postives = 87/164 (53.05%), Query Frame = 1 Query: 142 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVD-VKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAG 621 FKLV +GD GKT+ + R + +F+ Y+PTIG++ + +R WDTAGQE+F L Y AI+++DV+ R T+ N W D+ R N+ IVL GNK D V+ RQV + K+ + + E SAK N+N + F +A L G Sbjct: 10 FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPG 173
BLAST of FC920240 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21 Identity = 56/165 (33.94%), Postives = 94/165 (56.97%), Query Frame = 1 Query: 109 LPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVK-NRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 594 +P ++ +Y FK+VI+GD GK+ + R EF +K + TIGV+ + I CWDTAGQE+F + GYY A+I++D+T+++++KNV W +L + E +I I++ GNK D++ +R+V K+ F + + E SA ++ N + F Sbjct: 1 MPQEEEAEY-LFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSF 164
BLAST of FC920240 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21 Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 1 Query: 142 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD 624 FK+V++G+ G GKT V+R G F TIGV+ N K++ WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N + VL GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L + Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISE 173
BLAST of FC920240 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21 Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 1 Query: 142 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD 624 FK+V++G+ G GKT V+R G F TIGV+ N K++ WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N + VL GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L + Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISE 173
BLAST of FC920240 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21 Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 1 Query: 142 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD 624 FK+V++G+ G GKT V+R G F TIGV+ N K++ WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N + VL GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L + Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISE 173
BLAST of FC920240 vs. ExPASy Swiss-Prot
Match: RAB19_XENLA (Ras-related protein Rab-19 OS=Xenopus laevis GN=rab19 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21 Identity = 62/191 (32.46%), Postives = 99/191 (51.83%), Query Frame = 1 Query: 142 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDV-KNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGDPNLHF-----------VESPALAPPE 669 FK++++GD GKT V R +G F + TIGV+ N K++ WDTAGQE+F + YY AII +D+T R ++++VP W + + N+ ++L GNK D+ + RQ+ ++ +K+ L E SAK ++N ++ FL +A++L H+ P LAPPE Sbjct: 16 FKIILIGDSNVGKTCVVHRFQSGIFMDNQQNTIGVDFTVRSLNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAGKYGAANLMLMLMGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKELIARNTFHYHNESPRNSFILDSKPVLAPPE 206
BLAST of FC920240 vs. ExPASy Swiss-Prot
Match: RABJ_DICDI (Ras-related protein RabJ OS=Dictyostelium discoideum GN=rabJ PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.366e-20 Identity = 59/160 (36.88%), Postives = 87/160 (54.37%), Query Frame = 1 Query: 145 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDV-KNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 615 K+V++G GKT R++ G F K+ TIG KI++ WD+AGQ++F L YY AI++FD+T + T+ V W +L + E I +VLCGNK+D+ +NRQVK++ + + N Y E SAK N E FL + +KL Sbjct: 11 KVVLLGSSDVGKTALSLRYVDGIFPKRLTSTIGASFLTRTINIEGNKIKYLIWDSAGQDRFRSLATLYYRGACVAILVFDITQQKTFDIVKGWVEELKANIQEEIIMVLCGNKIDLEQNRQVKSETAKLYADEINAMYVETSAKENEGVEGMFLEIGKKL 170 The following BLAST results are available for this feature:
BLAST of FC920240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920240 ID=FC920240; Name=FC920240; organism=Citrus clementina; type=EST; length=762bpback to top |