FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: HAGHL_CHICK (Hydroxyacylglutathione hydrolase-like protein OS=Gallus gallus GN=HAGHL PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.270e-50
Identity = 98/212 (46.23%), Postives = 138/212 (65.09%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGED-PAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            MK+  I  LEDNY YL+IEE+T++A  VD   P++++E  ++              WDHA GNE++  + PG++VYG   + +   TH+V   ++ + GA + V  L TPCHTKGH+ Y++      D PA+F+GDTLFV GCG+F EG+AEQMY +L   LG LP+ T+V+CGHE TV+NL FAL VEP N  +++KLAWA+ +    LPT
Sbjct:    1 MKVKVISVLEDNYMYLVIEESTRDAVAVDAAVPKRLLEIVRKEDVVLRAVLITHHHWDHARGNEELVRLCPGLRVYGAD-ERIGALTHRVAPDEELTFGA-IRVRCLFTPCHTKGHMCYFMWEDGSLDAPALFSGDTLFVGGCGQFLEGTAEQMYTNLTQVLGDLPKETKVFCGHECTVRNLKFALKVEPENEAVKKKLAWARQRDDEDLPT 210          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: HAGHL_MOUSE (Hydroxyacylglutathione hydrolase-like protein OS=Mus musculus GN=Haghl PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.972e-45
Identity = 94/212 (44.34%), Postives = 131/212 (61.79%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGED-PAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            MK+  IP LEDNY YLIIEE T+EA  +D    E+++E A +              WDH  GN ++  ++PG+ V G   + +   T ++E+G+    GA ++V  L TP HT GH+SY++   +  D PA+F+GD L VAGCG   E +A+QMYQSL  TLG+LP  T+V+CGHE+T+ NL FA  VEP N  +Q KL+WAQ +    +PT
Sbjct:    1 MKVKVIPVLEDNYMYLIIEEHTREAVAIDVAVAERLLEIAGREGVSLTMVLSTHHHWDHTRGNAELAHILPGLAVLGAD-ERICALTRRLEHGEGLQFGA-IHVRCLLTPGHTSGHMSYFLWEDDCPDSPALFSGDALSVAGCGWHLEDTAQQMYQSLAKTLGTLPPETKVFCGHEHTLSNLEFAQKVEPCNEHVQAKLSWAQERDDEDIPT 210          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: HAGHL_HUMAN (Hydroxyacylglutathione hydrolase-like protein OS=Homo sapiens GN=HAGHL PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.077e-41
Identity = 90/203 (44.33%), Postives = 127/203 (62.56%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDP-AVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQ 633
            MK+  IP LEDNY YL+IEE T+EA  VD   P++++E   +              WDHA GN ++  + PG+ V G   + +   T ++ +G++   GA ++V  L TP HT GH+SY++   +  DP A+F+GD L VAGCG   EGSA+QMYQSL   LG+LP  T+V+CGHE+T+ NL FA  VEP N  ++ KL+WA+
Sbjct:    1 MKVKVIPVLEDNYMYLVIEELTREAVAVDVAVPKRLLEIVGREGVSLTAVLTTHHHWDHARGNPELARLRPGLAVLGAD-ERIFSLTRRLAHGEELRFGA-IHVRCLLTPGHTAGHMSYFLWEDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLA-ELGTLPPETKVFCGHEHTLSNLEFAQKVEPCNDHVRAKLSWAK 200          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2N_ARATH (Hydroxyacylglutathione hydrolase 2, mitochondrial OS=Arabidopsis thaliana GN=At2g31350 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.115e-38
Identity = 90/213 (42.25%), Postives = 122/213 (57.28%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSL--DNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            ++I  +PCL+DNYAY++ +E T    VVDP E E II++ K+              +DH GGN ++K+   G KV G ++  D + G    +++GDK+    H  V  + TP HTKGHIS Y  G      A+FTGDT+F   CGK FEG+ +QM  SL   + SLP  T +YCGHEYT+ N  FAL++EP+N  LQ   A     R   LPT
Sbjct:   71 LQIELVPCLKDNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRY-GAKVIGSAMDKDRIPGIDMALKDGDKWMFAGH-EVHVMDTPGHTKGHISLYFPGSR----AIFTGDTMFSLSCGKLFEGTPKQMLASL-QKITSLPDDTSIYCGHEYTLSNSKFALSLEPNNEVLQSYAAHVAELRSKKLPT 276          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_DICDI (Hydroxyacylglutathione hydrolase OS=Dictyostelium discoideum GN=hagh PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.325e-36
Identity = 79/195 (40.51%), Postives = 112/195 (57.44%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXX--WDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKE--GEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSN 600
            MK+  +   +DNY+YL+I+E  K A  +DP EP K+I +                   WDHAGGN  IK ++  I VYG   +  +G T ++EN +   IG+ + + +L  P HT  H+ Y +  +    +  ++FTGDTLF+ GCG+ FEG+ EQMY +L   +G LP  T VY GHEYT+KNL FA T+E  N
Sbjct:    1 MKVQPVLVNKDNYSYLVIDEKNKVAIAIDPCEPNKVISSLSSISSDIKINSVFTTHHHWDHAGGNNLIKTIIKDINVYGRD-ERFEGITKKLENNEVLKIGS-LKIKTLDAPAHTSSHVLYLIEDENEPNQVKSLFTGDTLFIGGCGRLFEGNPEQMYNALYNVIGKLPDNTLVYVGHEYTLKNLEFAKTLESEN 193          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_CYAP8 (Hydroxyacylglutathione hydrolase OS=Cyanothece sp. (strain PCC 8801) GN=gloB PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.966e-36
Identity = 82/214 (38.32%), Postives = 119/214 (55.61%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLD--NVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M+I  +P L DNY +L+ +  T+ AAVVDP EP  ++E   +              +DH G N ++++  P + +YGGS D   + G    ++ GD+   G  V  + L  P HT+ HI+YY   K  ++   +F GDTLF  GCG+ FEG+  QM  SL   L +LP  T+V+C HEYT+KNL FALTV+P N+ L+ +    +  R  G  T
Sbjct:    1 MEIKRLPALSDNYIFLLYDADTQTAAVVDPAEPTPVLECLNKLGAQLVAIFNTHHHYDHVGANNQLQQYFPNLCIYGGSEDRGRIPGQQVFLKEGDRVEFGQRVGEV-LFVPGHTRAHIAYYFPPKLSQETGELFCGDTLFGGGCGRLFEGTPTQMVNSL-TKLRNLPDNTRVWCAHEYTLKNLQFALTVDPDNLVLKNRYHQVKEFRHQGQAT 212          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SYNP6 (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gloB PE=3 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 5.179e-36
Identity = 88/218 (40.37%), Postives = 121/218 (55.50%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDP--AVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQK---LAWAQNQRQAGLPT 660
            M+I  +P L+DNY +L+++   ++AAVVDP E E ++ A +                DH GGN ++    P   V   ++D   + G T  +E GD+  I      + L  P HT+GHI+YY       +P  A+F GDTLF  GCG+ FEG+  QM  SL   L SLP  T +YC HEYT+ NL FALTVEP N  LQQ+   +A A+ Q QA +P+
Sbjct:    1 MRIDCLPALQDNYIFLLVDVEQRQAAVVDPAEAEPVLAALQAEGLTLTAILNTHHHGDHVGGNRRLLRQFPEAAVSASAVDRDRIPGQTVLLEAGDRLQICGQTAEV-LFVPGHTRGHIAYYFPEVAEGNPRGALFCGDTLFAGGCGRLFEGTPAQMLDSL-QQLRSLPDDTAIYCAHEYTLNNLRFALTVEPDNFDLQQRYQAVAIARQQGQATIPS 216          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SYNE7 (Hydroxyacylglutathione hydrolase OS=Synechococcus elongatus (strain PCC 7942) GN=gloB PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.179e-36
Identity = 88/218 (40.37%), Postives = 121/218 (55.50%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDP--AVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQK---LAWAQNQRQAGLPT 660
            M+I  +P L+DNY +L+++   ++AAVVDP E E ++ A +                DH GGN ++    P   V   ++D   + G T  +E GD+  I      + L  P HT+GHI+YY       +P  A+F GDTLF  GCG+ FEG+  QM  SL   L SLP  T +YC HEYT+ NL FALTVEP N  LQQ+   +A A+ Q QA +P+
Sbjct:    1 MRIDCLPALQDNYIFLLVDVEQRQAAVVDPAEAEPVLAALQAEGLTLTAILNTHHHGDHVGGNRRLLRQFPEAAVSASAVDRDRIPGQTVLLEAGDRLQICGQTAEV-LFVPGHTRGHIAYYFPEVAEGNPRGALFCGDTLFAGGCGRLFEGTPAQMLDSL-QQLRSLPDDTAIYCAHEYTLNNLRFALTVEPDNFDLQQRYQAVAIARQQGQATIPS 216          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SCHMA (Probable hydroxyacylglutathione hydrolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.179e-36
Identity = 87/191 (45.55%), Postives = 112/191 (58.64%), Query Frame = 1
Query:  112 DPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKI-----KEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQR---QAGLP 657
            DPVEP+KI+ A  Q               DHAGGN  +     K+ + G+KVYGG  D + G T  V +G K  + A    ++     HT GHI Y VT +   ++ AVFTGDTLF+ GCG+FFEG+AEQM+++L   L  LP  T+VYCGHEYTVKNL F LTVEP N  L+ +L   +  R   QA +P
Sbjct:    8 DPVEPDKILSAVTQRGLRLESILTTHHHLDHAGGNLDLVTKCRKQGLEGLKVYGGD-DRIGGLTDTVSHGYKXRLVATSTFIAWLHHRHTTGHICYLVTEENSTKEGAVFTGDTLFLGGCGRFFEGTAEQMFKALIEVLSKLPTTTKVYCGHEYTVKNLEFGLTVEPKNEALKHRLEAVKRLRASNQASVP 197          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: PNKD_BOVIN (Probable hydrolase PNKD OS=Bos taurus GN=PNKD PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 8.835e-36
Identity = 79/206 (38.35%), Postives = 119/206 (57.77%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQR 642
            +K+  IP L DNY+YLII+   + A  VDP +P+ +  + ++              WDH+GGN  +       +VYG   D++   TH + + D  S+G  + + +L TP HT+GH+ Y + G+  E P+ +F+GD LF++GCG+ FEG+AE M  SL   LG L   T ++ GHEY  +NL FA  VEP N+  ++K+ W Q QR
Sbjct:  119 VKVLPIPVLSDNYSYLIIDTQARLAVAVDPSDPQAVQASIEKEGVNLVAILCTHKHWDHSGGNRDLSRRHQDCRVYGSPQDSIPYLTHPLCHQDVVSVG-RLQIRALATPGHTQGHLVYLLDGEPYEGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLG-LGDDTLLWPGHEYAEENLGFAGVVEPENLARERKMQWVQRQR 322          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
HAGHL_CHICK1.270e-5046.23Hydroxyacylglutathione hydrolase-like protein OS=G... [more]
HAGHL_MOUSE7.972e-4544.34Hydroxyacylglutathione hydrolase-like protein OS=M... [more]
HAGHL_HUMAN1.077e-4144.33Hydroxyacylglutathione hydrolase-like protein OS=H... [more]
GLO2N_ARATH1.115e-3842.25Hydroxyacylglutathione hydrolase 2, mitochondrial ... [more]
GLO2_DICDI2.325e-3640.51Hydroxyacylglutathione hydrolase OS=Dictyostelium ... [more]
GLO2_CYAP83.966e-3638.32Hydroxyacylglutathione hydrolase OS=Cyanothece sp.... [more]
GLO2_SYNP65.179e-3640.37Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_SYNE75.179e-3640.37Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_SCHMA5.179e-3645.55Probable hydroxyacylglutathione hydrolase OS=Schis... [more]
PNKD_BOVIN8.835e-3638.35Probable hydrolase PNKD OS=Bos taurus GN=PNKD PE=2... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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