FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PROMM (Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain MIT 9313) GN=gloB PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.720e-26
Identity = 80/220 (36.36%), Postives = 116/220 (52.73%), Query Frame = 1
Query:    7 ALEQRIKMKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGS--LDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYV-TGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAG 651
            A   + +  I  +P L+DN  ++ I+    +A VVDP   E +    +                DH GG  ++    P   V   +   D +   T  V + DK S+  + V VL++    HT+ HI+YY+ T KE  EDPAVF GDTLF AGCG+ FEG+AE M+++L   L  LP  T+VYC HEYT  NL +A  + P +V + ++LA   ++RQ G
Sbjct:    8 ATSDKQRSSIHALPVLQDNIIWIWIKGN--QAVVVDPAIAEPVKTWLRTRKLSLAAVLQTHHHADHIGGTLELLRDWPNAAVVAAAEDRDRIPFQTISVRDRDKVSLLNSSVEVLAVAG--HTRAHIAYYLPTNKEDLEDPAVFCGDTLFGAGCGRLFEGTAEDMFKAL-QRLSCLPAKTRVYCAHEYTEANLRWASALHPEDVAISERLADVSSRRQRG 222          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHEPC (Hydroxyacylglutathione hydrolase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=gloB PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.859e-26
Identity = 75/222 (33.78%), Postives = 112/222 (50.45%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPG-----IKVYGGSLDNVKGCTHQVENGDKFSIGA---HVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLPT 660
            + I  I    DNY +++ +    +  VVDP + + +I                    DH GG  ++K  V       ++VYG   +N+      +    +  +     +  +  L+ P HT GHI+Y++      + A+F GDTLF AGCG+ FEG+AEQM  SL + L  LP  T+V+C HEYT+ NL FALTVEP+N+ LQ   QK    + Q  A +P+
Sbjct:    2 LTITAIKAFNDNYIWVLQQTPHSQVYVVDPGDAKVVIAYLVSHQLALAGILLTHHHQDHTGGVGELKRYVEQTSSQTLQVYGPQKENIAHVNVPLNPEMRTELTLPFLNAQIQVLNVPGHTAGHIAYFI------EDALFCGDTLFSAGCGRLFEGTAEQMLSSLTL-LAKLPANTRVFCAHEYTLSNLKFALTVEPNNLNLQAYMQKATEMRAQNSATIPS 216          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_METFK (Hydroxyacylglutathione hydrolase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=gloB PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.859e-26
Identity = 76/211 (36.02%), Postives = 107/211 (50.71%), Query Frame = 1
Query:   31 KIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +I  I   EDNY +L+ +     A VVDP +   ++E                   DH GG E++ +     +V+  + +      H V  GD+  I G  +++  L  P HT GH++YY  G       +F+GDTLF AGCG+ FEG+  QMY SL   L  LP  T+VYCGHEYT +NL FAL++EP +  L  +       R  GLP+
Sbjct:    3 EIIPILAFEDNYIWLLHQHG--HALVVDPGDAHPVLEILDARGLQLRAILVTHHHQDHTGGVEELIQATSA-QVFAPAKEQFSFPHHPVTAGDRLDIPGIALSLSVLDVPGHTVGHVAYYGDGM------LFSGDTLFGAGCGRLFEGTPGQMYSSL-QQLAQLPVNTRVYCGHEYTERNLAFALSLEPHHEALLSRREATAALRAQGLPS 203          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ERWT9 (Hydroxyacylglutathione hydrolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=gloB PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.859e-26
Identity = 68/195 (34.87%), Postives = 102/195 (52.31%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKL 609
            M +  IP L+DNY + + +++ +   +VDP E   ++ A  +               DH GG  ++    P + VYG    + KG    V +GD+  + G    +++  TP HT GHISY+        P +F GDTLF AGCG+ FEG+A+QM++S    L  LP  T V C HEYT+ NL F+ T  P + ++
Sbjct:    1 MNLTSIPALQDNYIWTLNDDSGR-CLIVDPGEAAPVLRAITENQWQPQAILLTHHHHDHVGGVAELLSHYPDLTVYGPQETSHKGANSLVGDGDRIHVLGLDFTIIA--TPGHTLGHISYF------SHPYLFCGDTLFSAGCGRLFEGTAKQMFESF-QKLNQLPDDTLVCCAHEYTLSNLTFSHTFYPQDTEI 185          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PSEHT (Hydroxyacylglutathione hydrolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=gloB PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.346e-26
Identity = 70/190 (36.84%), Postives = 93/190 (48.95%), Query Frame = 1
Query:   43 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKL 609
            I    DNY + +      +A VVDP + E +++   Q              +DH  G  K+    P I VYG +    KG T Q+ +G   ++     N+++  TP HT  HI Y        +   FTGDTLF  GCG+ FEGSAEQM+ S    L  LP   +VYC HEYT  NL FA  +EP N +L
Sbjct:    7 IKAFSDNYIWCLTTSNNTQAWVVDPGQAEPVLDYLAQHNLTLAGILITHHHYDHTDGVAKLVSENPNIAVYGPTNSPFKGITQQLTDGQSITVLNTAFNIIA--TPGHTLDHICYV------NEQLAFTGDTLFSGGCGRLFEGSAEQMWHSF-NKLRELPADCKVYCTHEYTQANLAFATAIEPRNPEL 187          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PSEFS (Hydroxyacylglutathione hydrolase OS=Pseudomonas fluorescens (strain SBW25) GN=gloB PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.346e-26
Identity = 72/210 (34.29%), Postives = 111/210 (52.86%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXW-DHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAG 651
            ++I  +P   DNY +L+ +  T+  AVVDP +   +++  +Q                DH GG E++K      KVYG + + +      + + D+ ++ G   ++ ++  P HT GHI++Y +G       +  GDTLF AGCG+ FEG+ EQMY SL   L +LP  T+VYC HEYT  NL FA  VEP N  + +++   +  R  G
Sbjct:    2 IQISALPAFTDNYIWLLQDPHTQRCAVVDPGDAAPVLDWLEQNPGWALSDILVTHHHHDHVGGVEQLKGAT-NAKVYGPANEKIPARDVALNDNDRITVLGWDFDIYTV--PGHTLGHITFYHSG------VLLCGDTLFAAGCGRLFEGTPEQMYTSL-ERLAALPADTRVYCTHEYTQSNLKFAQAVEPDNADIAERVESVRQLRARG 201          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PROMA (Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus GN=gloB PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.346e-26
Identity = 71/201 (35.32%), Postives = 111/201 (55.22%), Query Frame = 1
Query:   34 IFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGS--LDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTG-KEGE-DPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKL 621
            I  IP L DN  ++ ++E  K+A VVDP   E +I   K                DH GG +++  + P   V      LD ++  T  V + ++  I G  + V+ +  P HT  HI +++ G KE + DP +F GDTLF AGCG+ FEG+ EQM+ SL   + +LP+ T++YC HEYT  NL +A ++ P ++ ++++L
Sbjct:   10 IHPIPVLMDNIIWIWVKE--KQAIVVDPAISEPVINLLKGNGLSLHSVLQTHHHEDHIGGTQELINVWPSASVIAAKSDLDRIQFQTKSVVDNEELDILGQKIKVIEV--PGHTSNHICFFLQGSKESKIDPVLFCGDTLFGAGCGRLFEGTPEQMFNSLS-RINNLPKNTKIYCAHEYTEANLRWAKSIFPEDIYIEERL 205          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PECCP (Hydroxyacylglutathione hydrolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=gloB PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.346e-26
Identity = 68/214 (31.78%), Postives = 108/214 (50.47%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLPT 660
            M +  IP L+DNY +L+  +  +   +VDP E   +++A  Q               DH GG  ++ +  P + V+G       G T  +E G+  S+  +     +  P HT GHI+YY        P +F GDTLF AGCG+ FEG+  QMY+S+   +  LP  T + C HEYT+ NL F+  + P +  ++    +++  + + Q+ LPT
Sbjct:    1 MNLISIPALQDNYIWLLSNKENR-CVIVDPGEASPVLDALAQHALFPEAILLTHHHNDHVGGVHELLKHYPNLPVFGPKETAKCGATSLLEEGNTVSL-LNSEFSVIEVPGHTSGHIAYY------NAPFLFCGDTLFSAGCGRIFEGTPRQMYESI-QKIAVLPDDTVICCAHEYTLSNLRFSNAIWPEDQSIEAYLHEISQIREKSQSSLPT 205          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_HALHL (Hydroxyacylglutathione hydrolase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=gloB PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.346e-26
Identity = 72/206 (34.95%), Postives = 102/206 (49.51%), Query Frame = 1
Query:   43 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +  L DNY ++  + +   A  VDP +   +                     DH GG  ++ E    + V+G + + +    H +  G+ FS+        L  P HT GHI+Y   G       +F+GD LF  GCG+ FEG+A QM+ SL   L +LP  T+V CGHEYTVKNL FA   +P N +L Q+L  A++ R AG PT
Sbjct:    7 LAALADNYIWMARDASGTTAFAVDPGDAAVVEAWLHDHQLRLAAVLVTHHHGDHTGGVAELAER-HRVPVFGPATETIPTVDHPITGGEHFSLEGFGEFRVLDCPGHTAGHIAYLWEGH------LFSGDALFAGGCGRVFEGTAGQMHASL-QHLAALPADTRVCCGHEYTVKNLEFAHCADPKNDRLAQRLQAARDARAAGQPT 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SILPO (Hydroxyacylglutathione hydrolase OS=Silicibacter pomeroyi GN=gloB PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.288e-26
Identity = 79/215 (36.74%), Postives = 107/215 (49.77%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLD--NVKGCTHQVENGDKFSIG-AHVNVLSLHTPCHTKGHISYYV-TGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            ++I  +PCL DNYAYLI +    + A+VD  E   I     +              WDH  G   +++      V G   D   +      V  GD+F +G A V VL +    HT GHI++++ TGK     AVFT D+L   GCG+ FEG+ +QM+ SL   L +LP  T V  GHEYT  N  FAL+V+P N  L+ + A     R  G PT
Sbjct:    3 LEIVTVPCLSDNYAYLIHDADAGKTALVDAPEAAPIQSELDRRGWSLDQVWLTHHHWDHVDGLAALRDRYKPT-VIGAEADAHRLPPLDLAVSEGDRFDLGGAPVEVLDVSG--HTVGHIAFHLPTGK-----AVFTADSLMALGCGRLFEGTPDQMWASLS-KLAALPDDTLVCSGHEYTQSNARFALSVDPDNAALKTRAAEIDQARAEGRPT 208          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO2_PROMM3.720e-2636.36Hydroxyacylglutathione hydrolase OS=Prochlorococcu... [more]
GLO2_SHEPC4.859e-2633.78Hydroxyacylglutathione hydrolase OS=Shewanella put... [more]
GLO2_METFK4.859e-2636.02Hydroxyacylglutathione hydrolase OS=Methylobacillu... [more]
GLO2_ERWT94.859e-2634.87Hydroxyacylglutathione hydrolase OS=Erwinia tasman... [more]
GLO2_PSEHT6.346e-2636.84Hydroxyacylglutathione hydrolase OS=Pseudoalteromo... [more]
GLO2_PSEFS6.346e-2634.29Hydroxyacylglutathione hydrolase OS=Pseudomonas fl... [more]
GLO2_PROMA6.346e-2635.32Hydroxyacylglutathione hydrolase OS=Prochlorococcu... [more]
GLO2_PECCP6.346e-2631.78Hydroxyacylglutathione hydrolase OS=Pectobacterium... [more]
GLO2_HALHL6.346e-2634.95Hydroxyacylglutathione hydrolase OS=Halorhodospira... [more]
GLO2_SILPO8.288e-2636.74Hydroxyacylglutathione hydrolase OS=Silicibacter p... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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