FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SALTI (Hydroxyacylglutathione hydrolase OS=Salmonella typhi GN=gloB PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.288e-26
Identity = 66/189 (34.92%), Postives = 98/189 (51.85%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEP 594
            M +  IP  +DNY +++  +  +   +VDP E   +++A                 +DH GG +++ +  P + VYG +    KG TH V +GD   +      L   TP HT GH+ Y+        P +F GDTLF  GCG+ FEG+  QMYQSL + + SLP  T +   HEYT+ N+ FAL++ P
Sbjct:    1 MNLNSIPAFQDNYIWVLTNDEGR-CVIVDPGEAAPVLKAIAAHKWMPEAIFLTHHHYDHVGGVKELLQHFPQMTVYGPAETQDKGATHLVGDGDTIRVLGEKFTL-FATPGHTLGHVCYF------SHPYLFCGDTLFSGGCGRLFEGTPSQMYQSL-MKINSLPDDTLICSAHEYTLANIKFALSILP 180          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_XYLFT (Hydroxyacylglutathione hydrolase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=gloB PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.082e-25
Identity = 77/212 (36.32%), Postives = 110/212 (51.89%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M++  +P  ++NY + +I    + A +VDP +   I+EA  +               DH GG  ++ E  P + VY      +    H++  GD  +I G    V+  HTP HT  H+++      G D  +F GDTLF  GCG+ FEG+  QM  SL   L +LP  T+V CGHEYT+ N  FAL V+P+N  LQ++   A   R AGLPT
Sbjct:    1 MRLTPLPAFDNNYIWTLIAPDGR-AIIVDPGQALPILEAHSKGLIPTAILLTHHHA-DHIGGVPELLERWPTLPVYAPHDTRIALNYHRIGEGDSLNILGMRFQVI--HTPGHTHSHLTFI-----GND-LLFCGDTLFSLGCGQIFEGTPTQMLASL-QRLAALPIQTRVCCGHEYTLSNAAFALHVDPTNTALQKRRQQANAMRLAGLPT 201          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_XYLFM (Hydroxyacylglutathione hydrolase OS=Xylella fastidiosa (strain M12) GN=gloB PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.082e-25
Identity = 77/212 (36.32%), Postives = 110/212 (51.89%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M++  +P  ++NY + +I    + A +VDP +   I+EA  +               DH GG  ++ E  P + VY      +    H++  GD  +I G    V+  HTP HT  H+++      G D  +F GDTLF  GCG+ FEG+  QM  SL   L +LP  T+V CGHEYT+ N  FAL V+P+N  LQ++   A   R AGLPT
Sbjct:    1 MRLTPLPAFDNNYIWTLIAPDGR-AIIVDPGQALPILEAHSKGLIPTAILLTHHHA-DHIGGVPELLERWPTLPVYAPHDTRIALNYHRIGEGDSLNILGLRFQVI--HTPGHTHSHLTFI-----GND-LLFCGDTLFSLGCGQIFEGTPTQMLASL-QRLAALPIQTRVCCGHEYTLSNAAFALHVDPTNTALQKRRQQANAMRLAGLPT 201          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_XYLF2 (Hydroxyacylglutathione hydrolase OS=Xylella fastidiosa (strain M23) GN=gloB PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.082e-25
Identity = 77/212 (36.32%), Postives = 110/212 (51.89%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M++  +P  ++NY + +I    + A +VDP +   I+EA  +               DH GG  ++ E  P + VY      +    H++  GD  +I G    V+  HTP HT  H+++      G D  +F GDTLF  GCG+ FEG+  QM  SL   L +LP  T+V CGHEYT+ N  FAL V+P+N  LQ++   A   R AGLPT
Sbjct:    1 MRLTPLPAFDNNYIWTLIAPDGR-AIIVDPGQALPILEAHSKGLIPTAILLTHHHA-DHIGGVPELLERWPTLPVYAPHDTRIALNYHRIGEGDSLNILGMRFQVI--HTPGHTHSHLTFI-----GND-LLFCGDTLFSLGCGQIFEGTPTQMLASL-QRLAALPIQTRVCCGHEYTLSNAAFALHVDPTNTALQKRRQQANAMRLAGLPT 201          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SALEP (Hydroxyacylglutathione hydrolase OS=Salmonella enteritidis PT4 (strain P125109) GN=gloB PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.082e-25
Identity = 66/189 (34.92%), Postives = 98/189 (51.85%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEP 594
            M +  IP  +DNY +++  +  +   +VDP E   +++A  +               DH GG +++ +  P + VYG +    KG TH V +GD   +      L   TP HT GH+ Y+        P +F GDTLF  GCG+ FEG+  QMYQSL + + SLP  T +   HEYT+ N+ FAL++ P
Sbjct:    1 MNLNSIPAFQDNYIWVLTNDEGR-CVIVDPGEAAPVLKAIAEHKWMPEAIFLTHHHHDHVGGVKELLQHFPQMTVYGPAETQDKGATHLVGDGDTIRVLGEKFTL-FATPGHTLGHVCYF------SHPYLFCGDTLFSGGCGRLFEGTPSQMYQSL-MKINSLPDDTLICSAHEYTLANIKFALSILP 180          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SALDC (Hydroxyacylglutathione hydrolase OS=Salmonella dublin (strain CT_02021853) GN=gloB PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.082e-25
Identity = 66/189 (34.92%), Postives = 98/189 (51.85%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEP 594
            M +  IP  +DNY +++  +  +   +VDP E   +++A  +               DH GG +++ +  P + VYG +    KG TH V +GD   +      L   TP HT GH+ Y+        P +F GDTLF  GCG+ FEG+  QMYQSL + + SLP  T +   HEYT+ N+ FAL++ P
Sbjct:    1 MNLNSIPAFQDNYIWVLTNDEGR-CVIVDPGEAAPVLKAIAEHKWMPEAIFLTHHHHDHVGGVKELLQHFPQMTVYGPAETQDKGATHLVGDGDTIRVLGEKFTL-FATPGHTLGHVCYF------SHPYLFCGDTLFSGGCGRLFEGTPSQMYQSL-MKINSLPDDTLICSAHEYTLANIKFALSILP 180          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SALAR (Hydroxyacylglutathione hydrolase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=gloB PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.082e-25
Identity = 68/189 (35.98%), Postives = 99/189 (52.38%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEP 594
            M +  IP  +DNY +++  +  +   +VDP E   +++A                  DH GG +++ +  P + VYG +    KG TH V +GD   +  + N     TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL + + +LP  T +   HEYT+ NL FAL++ P
Sbjct:    1 MNLNSIPAFQDNYIWVLNNDEGR-CVIVDPGEAAPVLKAIDDHKWIPEAIFLTHHHHDHVGGVKELLQHFPQMTVYGPTETQDKGATHLVGDGDTVLVLGY-NFSIFATPGHTLGHICYF------SHPYLFCGDTLFSGGCGRLFEGTALQMYQSL-MKINTLPDDTLICSAHEYTLANLKFALSILP 180          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_RHOPA (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas palustris GN=gloB PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.082e-25
Identity = 72/208 (34.62%), Postives = 103/208 (49.52%), Query Frame = 1
Query:   43 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQV--ENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +PCL DN+ YL+ +  T   A +D  E   +I A  +               DH GG  ++K+     +V+     N K     V  + GD   +G  +    L TP HT  H+SY       +D A+F  DTLF  GCG+ FEG+   M++SL + L +LP   ++YCGHEYT  N+ FAL +EP N  LQ +    ++ R  G PT
Sbjct:    8 VPCLTDNFGYLVHDPATGATASIDAPEAAPLIAALDKEGWKLTDILVTHHHGDHVGGIAELKKKYQ-CRVHAPHDANAKIADADVRLQEGDVVRVG-DLTARVLETPGHTLDHLSYVFD----DDRALFAADTLFSIGCGRVFEGTYPMMWESL-LKLRALPDDFKLYCGHEYTASNVKFALGIEPDNAALQARAKQVESLRAEGKPT 208          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PSEU2 (Hydroxyacylglutathione hydrolase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=gloB PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.082e-25
Identity = 67/200 (33.50%), Postives = 111/200 (55.50%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIE-AAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLA 624
            ++I  +P   DNY +L+ + ++++ AVVDP + + ++   A+                DH GG  ++K+     +V G + + +      + + D+ ++     V+    P HT GHI++Y   ++   P +F+GDTLF AGCG+ FEG+ +QM+ SL   L  LP  T +YC HEYT+ NL FA  VEP+NV + ++LA
Sbjct:    2 IQIHALPAFNDNYIWLLQDLSSQQCAVVDPGDAKPVLGWLAQNPDYRLTDILITHHHNDHVGGVAELKQSTAA-RVLGPAAETIPARDIALVDNDRMTVLGLEFVVHA-VPGHTLGHIAFY--HEDATTPLLFSGDTLFAAGCGRLFEGTPQQMHDSLG-RLAKLPDSTLIYCAHEYTLSNLRFAQAVEPANVDIAERLA 196          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_BARHE (Hydroxyacylglutathione hydrolase OS=Bartonella henselae GN=gloB PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.082e-25
Identity = 72/198 (36.36%), Postives = 99/198 (50.00%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYG-GSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQK 618
            M I    C EDN+  LI +ET+   A +D  E   I  A K+               DH     ++K++   I +      + +      ++  + F  G H  +L+L TP HT G +SYY      ++  +F GDTLF  GCG+ FEG+  QM  SL   L  LP  T +YCGHEYT  N LFALT++P N KLQQ+
Sbjct:    1 MLIEQFICREDNFGVLIHDETSGYTAAIDAPESNAIQNALKRRNWTLQTIFLTHHHHDHVEALAELKQIYKAIVIGPEAEKEKISHIDQTLKPDESFLFGTHT-ILALSTPGHTLGALSYYFP----QENLLFAGDTLFSLGCGRLFEGTPAQMLNSL-KKLRQLPDETLLYCGHEYTKSNALFALTLDPYNQKLQQR 192          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO2_SALTI8.288e-2634.92Hydroxyacylglutathione hydrolase OS=Salmonella typ... [more]
GLO2_XYLFT1.082e-2536.32Hydroxyacylglutathione hydrolase OS=Xylella fastid... [more]
GLO2_XYLFM1.082e-2536.32Hydroxyacylglutathione hydrolase OS=Xylella fastid... [more]
GLO2_XYLF21.082e-2536.32Hydroxyacylglutathione hydrolase OS=Xylella fastid... [more]
GLO2_SALEP1.082e-2534.92Hydroxyacylglutathione hydrolase OS=Salmonella ent... [more]
GLO2_SALDC1.082e-2534.92Hydroxyacylglutathione hydrolase OS=Salmonella dub... [more]
GLO2_SALAR1.082e-2535.98Hydroxyacylglutathione hydrolase OS=Salmonella ari... [more]
GLO2_RHOPA1.082e-2534.62Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]
GLO2_PSEU21.082e-2533.50Hydroxyacylglutathione hydrolase OS=Pseudomonas sy... [more]
GLO2_BARHE1.082e-2536.36Hydroxyacylglutathione hydrolase OS=Bartonella hen... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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