FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHESW (Hydroxyacylglutathione hydrolase OS=Shewanella sp. (strain W3-18-1) GN=gloB PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.414e-25
Identity = 75/222 (33.78%), Postives = 111/222 (50.00%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPG-----IKVYGGSLDNVKGCTHQVENGDKFSIGA---HVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLPT 660
            + I  I    DNY +++ +    +  VVDP + + +I                    DH GG  ++K  V       ++VYG   +N+      +    +  +     +  +  L+ P HT GHI+Y +      + A+F GDTLF AGCG+ FEG+AEQM  SL + L  LP  T+V+C HEYT+ NL FALTVEP+N+ LQ   QK    + Q  A +P+
Sbjct:    2 LTITAIKAFNDNYIWVLQQTPHSQVYVVDPGDAKVVIAYLVSHQLALAGILLTHHHQDHTGGVGELKRYVEQTSSQTLQVYGPQKENIAHVNVPLNPEMRTELTLPFLNAQIQVLNVPGHTAGHIAYVI------EDALFCGDTLFSAGCGRLFEGTAEQMLSSLTL-LAKLPANTRVFCAHEYTLSNLKFALTVEPNNLNLQAYMQKATEMRAQNSATIPS 216          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_THICR (Hydroxyacylglutathione hydrolase OS=Thiomicrospira crunogena (strain XCL-2) GN=gloB PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.412e-25
Identity = 70/212 (33.02%), Postives = 103/212 (48.58%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETT--KEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLP 657
            MKI  +P L DNY ++I  E    K A +VDP E +K+I   ++              +DH  G   + + +  + +   +    K  TH V+ GD+  +  +     + TP HT  HI +Y         A+F+GDTLF  GCGK ++   EQM +SL + L +L     VYCGHEYT  NL FA   EP+   +  +LA  +   Q  +P
Sbjct:    1 MKIVGLPTLSDNYTWVIQSENADDKRAWIVDPGESQKVIHYFEENQLQLDGILLTHHHYDHTDGIMGVMDALGEVAIVSNAQGPFKPVTHPVKEGDQVQV-LNETFQVIETPGHTDEHICFY------HPEALFSGDTLFTGGCGKIWQNPPEQMAESL-LKLRALNDDCMVYCGHEYTYANLNFAKIAEPNTPAILDRLAEVKTNTQRNIP 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_RHOFD (Hydroxyacylglutathione hydrolase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=gloB PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.412e-25
Identity = 74/211 (35.07%), Postives = 108/211 (51.18%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M++  +P   DNY +++ +E  + A VVDP + + ++EA +Q               DH GG   ++    G +V+G + + +     ++  GD+      +N   +  P HT  HI+Y+    +G  P +F GDTLF AGCG+ FEGS  QM  SL  TL +LP  T+V C HEYT+ NL FA  VEP N  L      A+  R    PT
Sbjct:    1 MQLIPLPAFTDNYIWMVHDE--RHALVVDPGDAQPVLEALQQLGLQLETILVTHHHPDHTGGVAALRAAT-GAQVFGPAREPMPEPLIRL-TGDQQLQALGLNFQVIDVPGHTACHIAYFCADVDGA-PLLFCGDTLFSAGCGRLFEGSPAQMLASLD-TLAALPDATRVCCAHEYTLSNLKFACAVEPVNQALTDYTVKAEALRSQQQPT 205          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_MESSB (Hydroxyacylglutathione hydrolase OS=Mesorhizobium sp. (strain BNC1) GN=gloB PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.412e-25
Identity = 75/213 (35.21%), Postives = 105/213 (49.30%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLD--NVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            ++I    C  DN+  L  +  T   A+VD  E + I+EA K+               DH   N  +KE   G+ + G + +   + G   QV  GD   +G +     + TP HT GHI++Y   K G     FT DTLF  GCG+ FE     MY+SL   L  LP  T +YCGHEYT  N  FAL+V+P+N  L+++    +  R+ G PT
Sbjct:    3 LEIEQFMCRSDNFGILARDSETGITALVDAPEEQAILEAIKRTGWTPSLLLITHHHADHVEANLALKERF-GLTIIGPAKEASKIPGIDRQVNEGDVVRVG-NQEARVIETPGHTAGHITFYFA-KAG---IAFTADTLFALGCGRLFECKPPVMYESL-KKLVELPLETVIYCGHEYTESNARFALSVDPTNSALKERAKKIEALRREGRPT 208          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_HAHCH (Hydroxyacylglutathione hydrolase OS=Hahella chejuensis (strain KCTC 2396) GN=gloB PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.412e-25
Identity = 73/210 (34.76%), Postives = 105/210 (50.00%), Query Frame = 1
Query:   31 KIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +I  IP   DNY + I +    +A VVDP + + ++    +               DH GG  ++    P + VYG     +K  T  ++ GD+  +G   ++  L TP HT  HISY+  G     P +F GDTLF AGCG+ FEG    M QSL   L  LP  T +YC HEYT+ NL FA  V P + ++ ++    ++ R  G+PT
Sbjct:    3 EILPIPAFNDNYIWSI-QSDQGDAWVVDPGDAQPVLRHLAENHLTLRGILITHHHHDHTGGVNELLANHP-VPVYGFMRSAIKAITVPLQEGDRVDLG-DFSLEVLETPGHTLDHISYF--GDIAGAPRLFCGDTLFSAGCGRLFEGDPAMMRQSLD-KLKRLPGDTYIYCAHEYTLSNLRFAQAVMPESDEVNKRKLQCESLRARGVPT 206          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHESA (Hydroxyacylglutathione hydrolase OS=Shewanella sp. (strain ANA-3) GN=gloB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.113e-25
Identity = 76/221 (34.39%), Postives = 110/221 (49.77%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVP-----GIKVYGGSLDNVKGCTHQVEN--GDKFS---IGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            + I  I    DNY +++ +++ +   VVDP +   +++                   DH GG   + + V       + VYG   ++++G    +E    D  +   I A V +LS+  P HT GHI+Y V      D A+F GDTLF AGCG+ FEG+  QM+QSL + L +LP  T+VYC HEYT+ NL FA TV+  N  L   +  A   R  G  T
Sbjct:    2 LTITAINAFNDNYIWVLRQDSQQAVYVVDPGDANVVLDYLHAQRLSLAGILITHHHRDHTGGIAALTDHVKQTTGHDLAVYGPQSEDIQGINQPIEPTLSDSLTLPFIDAPVRILSV--PGHTAGHIAYLV------DDALFCGDTLFSAGCGRLFEGTPSQMWQSLSL-LAALPDETRVYCAHEYTLSNLKFAQTVDTDNEALNAYVEEASTLRAQGKAT 213          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_RHOPB (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas palustris (strain BisB18) GN=gloB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.113e-25
Identity = 75/208 (36.06%), Postives = 106/208 (50.96%), Query Frame = 1
Query:   49 CLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEM----VPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            CL+DN+ YL+ +  +   A +D  E   I+ A  +               DH GG  ++K+     V      G ++  V     +V  GD   IG  +  + L TP HT  H++Y       +D A+F  DTLF  GCG+ FEG+   M++SL + L  LP   ++YCGHEYT  N+ FALTVEP+N  LQ + A   + R AGLPT
Sbjct:   10 CLKDNFGYLVHDSDSGATASIDAPEAAPILAALAREGWTLTDILVTHHHADHIGGIAELKQATNCRVVAPHDNGAAIPLVD---LRVRQGDVVKIGGLLARV-LETPGHTLDHVAYVFD----DDKALFAADTLFSIGCGRVFEGTYPMMWESL-LKLRVLPDDMRLYCGHEYTAANVKFALTVEPNNPALQARAAEVAHLRTAGLPT 208          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PSEMY (Hydroxyacylglutathione hydrolase OS=Pseudomonas mendocina (strain ymp) GN=gloB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.113e-25
Identity = 70/210 (33.33%), Postives = 108/210 (51.43%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAK-QXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAG 651
            ++I  +P   DNY +L+ +  ++  AVVDP +   ++   +                +DH GG E++K+   G +V G + + +      + + D   + G    ++++  P HT GHI+YY      E   +  GDTLF  GCG+ FEG+ +QM+QSL   L +LP  T+VYC HEYT+ NL FA  VEP N  +  +LA     R  G
Sbjct:    2 IQIDALPAFNDNYIWLLQDPISRRCAVVDPGDAAPVLAWLEAHGDWTLSDILITHHHFDHVGGVEQLKKAT-GARVAGPAAEKIPARDVDLGDNDLIEVLGLRFQIMAV--PGHTLGHIAYY----HAEQNLLLCGDTLFAGGCGRLFEGTPQQMHQSLS-RLAALPGATRVYCTHEYTLSNLRFAHAVEPHNPDVSARLAEVSRWRDEG 203          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PROM3 (Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain MIT 9303) GN=gloB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.113e-25
Identity = 78/220 (35.45%), Postives = 115/220 (52.27%), Query Frame = 1
Query:    7 ALEQRIKMKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGS--LDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYV-TGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAG 651
            A   + +  I  +P L+DN  ++ I+    +A VVDP   E +    +                DH GG  ++    P   V   +   D +   T  V + DK S+  + V VL++    HT+ HI+YY+ T KE  EDPAVF GDTLF AGCG+ FEG+AE M+++L   L  LP  T+VYC HEYT  NL +A  + P ++ + ++L    ++RQ G
Sbjct:    8 ATSDKQRSSIHALPVLQDNIIWIWIKGD--QAVVVDPAIAEPVKTWLQTRKLSLAAVLQTHHHADHIGGTLELLRDWPNAAVVAAADDRDRIPFQTISVRDRDKISLLNSSVEVLAVAG--HTRAHIAYYLPTNKEDREDPAVFCGDTLFGAGCGRLFEGTAEDMFKAL-QRLCCLPAKTRVYCAHEYTEANLRWASALHPEDIAISERLVDVSSRRQRG 222          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_NITEU (Hydroxyacylglutathione hydrolase OS=Nitrosomonas europaea GN=gloB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.113e-25
Identity = 68/212 (32.08%), Postives = 107/212 (50.47%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLS-LHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            + +F +    DNY +++  +  + A ++DP +   ++   +Q               DH GG   + +    I VYG + + + G TH +  GD          LS L  P HT GHI+ +   +      +F GDTLF  GCG+ FEG+A+QM+ SL   L  LP  TQVYC HEYT+ N+ FA  ++P N +L +  +  + +R+  +PT
Sbjct:    2 INVFPVRAFRDNYIWIVHNQ--QFALIIDPGDATPVLTWLRQQKLQPIAILCTHHHHDHTGGISLLVQKFE-IPVYGPASEKIPGMTHPLAEGDTLVFPELSLELSILDVPGHTAGHIACHGQNR------LFCGDTLFACGCGRIFEGNAQQMFDSL-QKLTDLPDETQVYCAHEYTLDNIRFARAIDPDNPELIELESNVEEKREQNMPT 203          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO2_SHESW1.414e-2533.78Hydroxyacylglutathione hydrolase OS=Shewanella sp.... [more]
GLO2_THICR2.412e-2533.02Hydroxyacylglutathione hydrolase OS=Thiomicrospira... [more]
GLO2_RHOFD2.412e-2535.07Hydroxyacylglutathione hydrolase OS=Rhodoferax fer... [more]
GLO2_MESSB2.412e-2535.21Hydroxyacylglutathione hydrolase OS=Mesorhizobium ... [more]
GLO2_HAHCH2.412e-2534.76Hydroxyacylglutathione hydrolase OS=Hahella chejue... [more]
GLO2_SHESA4.113e-2534.39Hydroxyacylglutathione hydrolase OS=Shewanella sp.... [more]
GLO2_RHOPB4.113e-2536.06Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]
GLO2_PSEMY4.113e-2533.33Hydroxyacylglutathione hydrolase OS=Pseudomonas me... [more]
GLO2_PROM34.113e-2535.45Hydroxyacylglutathione hydrolase OS=Prochlorococcu... [more]
GLO2_NITEU4.113e-2532.08Hydroxyacylglutathione hydrolase OS=Nitrosomonas e... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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