FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_NITEC (Hydroxyacylglutathione hydrolase OS=Nitrosomonas eutropha (strain C91) GN=gloB PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.372e-25
Identity = 71/212 (33.49%), Postives = 109/212 (51.42%), Query Frame = 1
Query:   34 IFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFS---IGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +F +   +DNY +++  +  + A ++DP +   ++    Q               DH GG   + +    I VYG + + + G TH +  GD  S   +    +VL +  P HT GHI+YY     G++  +F GDTLF  GCG+ FEGSA+QM  SL   L SLP  T VYC HEYT+ N+ FA  ++P N  L +  +  + + +  +PT
Sbjct:    4 VFPVRAFKDNYIWIVHNQ--QFALIIDPGDATPVLAWISQQNLQPIAILCTHHHHDHTGGIPSLVQEF-AIPVYGPANEKIPGMTHPLTGGDTLSFPELSLEFSVLDI--PGHTAGHIAYY-----GQN-YLFCGDTLFACGCGRIFEGSAQQMLASL-QKLASLPDETLVYCAHEYTLANVRFARVLDPDNPDLIKLESTVEEKLKQNIPT 203          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_CHRSD (Hydroxyacylglutathione hydrolase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=gloB PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.372e-25
Identity = 71/213 (33.33%), Postives = 106/213 (49.77%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEK-IKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            + +  IP  +DNY +L+ ++ + +  +VDP + + +IE  ++               DH GG +  +K   P  +V G     +      V + D+  + G    V ++  P HT  HI++Y  G  G    +F GDTLF  GCG+ FEG+AEQM++SL   L +LP  T V+ GHEYT+ NL FA   EP N      L   +  RQ   PT
Sbjct:    2 LTVIPIPAFQDNYIWLLRQDASDKVVIVDPGDAQPVIEYLEREGLSLAAILVTHHHHDHTGGIDALVKRYSP--RVIGPDNSAIPAIDEVVGDEDECRVQGRRFEVFAV--PGHTLDHIAFYAPGTPG---LLFCGDTLFSGGCGRLFEGTAEQMHRSL-ARLAALPDDTLVFAGHEYTLANLRFAQAAEPDNPARDAHLGECERARQLERPT 206          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_BRASO (Hydroxyacylglutathione hydrolase OS=Bradyrhizobium sp. (strain ORS278) GN=gloB PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.372e-25
Identity = 74/206 (35.92%), Postives = 100/206 (48.54%), Query Frame = 1
Query:   49 CLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYG--GSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            CL DN+ YLI +  T   A VD  E   I+   +               +DH GG  ++K+   G +V G       +     +V +GD   +G  +    L TP HT  H+SY        D AVF  DTLF  GCG+ FEG+   M+ SL + L +LP   ++YCGHEYT  N+ FALTV+P N  L+ + A     R A  PT
Sbjct:   10 CLSDNFGYLIHDPATGATASVDAPEAGPIVRQLEANGWTLTDILITHHHYDHVGGVAELKQRY-GCRVIGPHDRKAAIADVDLRVAHGDVVKVG-ELLARVLETPGHTLDHVSYVFDA----DKAVFAADTLFSIGCGRVFEGTYPMMWDSL-LKLRTLPDDFRLYCGHEYTASNVKFALTVDPDNEALKARAAEVTRLRAANQPT 208          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_BART1 (Hydroxyacylglutathione hydrolase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=gloB PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.372e-25
Identity = 74/199 (37.19%), Postives = 105/199 (52.76%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQK 618
            M I    C +DN+  LI +E +   A +D  E + I  A K+               DH     ++K++   I V+G + +  K       +++ +K   G+  ++L+L TP HT G +SYY   K+     +F GDTLF  GCG+ FEG+A QM  SL   L  LP  T +YCGHEYT  N LFALT++P N KLQQ+
Sbjct:    1 MLIEQFICRKDNFGVLIHDEKSGMTAAIDAPESKAIHNALKRRNWTLHTIFVTHHHHDHVEALAELKQVYNAI-VFGPAAEKNKIYHLDQTLQSDEKLLFGSQ-SLLALSTPGHTLGALSYYFPEKK----LLFAGDTLFSLGCGRLFEGTAVQMLNSL-KKLCKLPDETLLYCGHEYTKNNALFALTLDPHNQKLQQR 192          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_XYLFA (Hydroxyacylglutathione hydrolase OS=Xylella fastidiosa GN=gloB PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.017e-25
Identity = 75/212 (35.38%), Postives = 109/212 (51.42%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M++  +P  ++NY + +I    + A +VDP +   I+EA  +               DH GG  ++ E  P + +Y      +    H++  GD  +I G    V+  HTP HT  H+++      G D  +F GDTLF  GCG+ FEG+  QM  SL   L +LP  T+V CGHEYT+ N  FAL V+P+N  LQ++   A   R A LPT
Sbjct:    1 MRLTPLPAFDNNYIWTLIAPDGR-AIIVDPGQALPILEAHSKGLIPTAILLTHHHA-DHIGGVPELLERWPTLPIYAPHDTRIALNYHRIGEGDSLNILGLRFQVI--HTPGHTHSHLTFI-----GND-LLFCGDTLFSLGCGQIFEGTPTQMLASL-QRLAALPIQTRVCCGHEYTLSNAAFALHVDPTNTALQKRRQQANAMRLANLPT 201          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_RHOP5 (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas palustris (strain BisA53) GN=gloB PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.017e-25
Identity = 78/208 (37.50%), Postives = 100/208 (48.08%), Query Frame = 1
Query:   49 CLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEM----VPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            CL DN+ YLI +  T   A VD  E   II A  +               DH GG  ++K+     V       G +  V     +V  GD   +G  +  + L TP HT  H++Y       +D AVF GDTLF  GCG+ FEG+   M+ SL + L  LP   ++YCGHEYT  N+ FAL VEP N  LQ + A     R AG PT
Sbjct:   10 CLNDNFGYLIHDPATGATASVDAPEAAPIIAALAREGWTLTDILVTHHHGDHVGGVAELKQKYRCRVVAPHDRNGRIPEVD---LRVAQGDVVKVGGLLARV-LETPGHTLDHLAYVFD----DDKAVFAGDTLFSIGCGRVFEGTYPMMWDSL-LKLRVLPDDMRLYCGHEYTAANVKFALGVEPDNPALQARAAQVTALRAAGQPT 208          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PSE14 (Hydroxyacylglutathione hydrolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=gloB PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.017e-25
Identity = 67/200 (33.50%), Postives = 108/200 (54.00%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIE-AAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLA 624
            ++I  +P   DNY +L+ + ++++ AVVDP + + ++    +                DH GG  ++K+     +V G + + +      + + D+ ++     V+    P HT GHI++Y   ++   P +F+GDTLF AGCG+ FEG+ EQM+ SL   L  LP  T +YC HEYT+ NL FA  VEP N  + Q+LA
Sbjct:    2 IQIHALPAFNDNYIWLLQDLSSQQCAVVDPGDAKPVLGWLTEHPDYRLTDILITHHHNDHVGGVAELKQATRA-RVLGPAAETIPARDVALVDHDRLTVLGLEFVVHA-VPGHTLGHIAFY--HEDATTPLLFSGDTLFAAGCGRLFEGTPEQMHDSL-ERLAKLPDSTLIYCAHEYTLSNLRFAQAVEPDNQDIAQRLA 196          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_RHILO (Hydroxyacylglutathione hydrolase OS=Rhizobium loti GN=gloB PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.164e-25
Identity = 69/213 (32.39%), Postives = 103/213 (48.36%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            ++I    C  DN+  L+ +  + + A++D  E   I+ A K+               DH   N  +KE    +++ G   +  K  G    VE G    +G    +  + TP HT GH+SY++   +      FT DTLF  GCG+ FE     MY+SL   L +LP  T +YCGHEYT+ N  FALTV+P+N  L+++    +  R    PT
Sbjct:    3 VEIEQFMCRSDNFGVLVHDPKSGQTAIIDAPEEAPILAAIKRTGWTPTMILTTHHHMDHVEANLALKERFK-LRIVGPEAEKAKIPGIDETVEEGSVLHLGDE-RIEVIATPGHTAGHVSYHLPASK----VAFTADTLFALGCGRLFECKPPVMYESLR-KLAALPAATTIYCGHEYTLANARFALTVDPTNSALKERATRIEALRVDNKPT 208          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_RALME (Hydroxyacylglutathione hydrolase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=gloB PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.164e-25
Identity = 79/218 (36.24%), Postives = 103/218 (47.25%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPG------IKVYGGSLDNVKGCTHQVENGDKFSIG-AHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +K+  IP  +DNY + I +  +  AAVVDP E   + +   Q               DH GG   +    P       + V G   + +   T  V  GD  ++    V    L  P HT GH++Y V    G  P VF GDTLF +GCG+ FEG+  QM  SL   L +LP  T+VYC HEYT  N+ FA  VEP+N  L    A     R+AG PT
Sbjct:    2 LKVEPIPAFQDNYIWAIHDGHS--AAVVDPGEAAPVEQFLAQRGLALGAIVITHHHGDHQGGVSDLLARHPSGPNGEPLPVIGPQGERIGHRTQAVREGDTVTLRHPAVTFRVLDVPGHTAGHVAY-VGDLPGAGPVVFCGDTLFASGCGRLFEGTPAQMLASLD-KLAALPGDTRVYCAHEYTRSNVRFAQAVEPANPDLAAWAARVDILREAGTPT 215          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ENT38 (Hydroxyacylglutathione hydrolase OS=Enterobacter sp. (strain 638) GN=gloB PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.164e-25
Identity = 70/218 (32.11%), Postives = 104/218 (47.71%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLH-------TPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M +  IP  +DNY +++ ++  +   +VDP E   +++A ++               DH GG   +    P ++VYG      KG T  V+ G         NVL L        TP HT GHI +Y        P +F GDT+F  GCG+ FEG+ EQMYQS    + +LP+ T + C HEYT+ N+ FA ++ P +  +Q      +  R   L T
Sbjct:    1 MNLISIPAFQDNYIWVLADDKDR-CVIVDPGEAAPVLKAIEENGWQPEAILLTHHHNDHVGGVPALCAKFPHLEVYGPQETQNKGTTCVVDEGQ--------NVLILEWEFSVFATPGHTSGHICFY------SSPYLFCGDTMFSGGCGRLFEGTPEQMYQSF-QKINALPEETIICCAHEYTLANMKFAASILPEDRAIQDYYHKVKELRAKNLST 202          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO2_NITEC5.372e-2533.49Hydroxyacylglutathione hydrolase OS=Nitrosomonas e... [more]
GLO2_CHRSD5.372e-2533.33Hydroxyacylglutathione hydrolase OS=Chromohalobact... [more]
GLO2_BRASO5.372e-2535.92Hydroxyacylglutathione hydrolase OS=Bradyrhizobium... [more]
GLO2_BART15.372e-2537.19Hydroxyacylglutathione hydrolase OS=Bartonella tri... [more]
GLO2_XYLFA7.017e-2535.38Hydroxyacylglutathione hydrolase OS=Xylella fastid... [more]
GLO2_RHOP57.017e-2537.50Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]
GLO2_PSE147.017e-2533.50Hydroxyacylglutathione hydrolase OS=Pseudomonas sy... [more]
GLO2_RHILO9.164e-2532.39Hydroxyacylglutathione hydrolase OS=Rhizobium loti... [more]
GLO2_RALME9.164e-2536.24Hydroxyacylglutathione hydrolase OS=Ralstonia meta... [more]
GLO2_ENT389.164e-2532.11Hydroxyacylglutathione hydrolase OS=Enterobacter s... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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