FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14527 contig Ccv1_Contig14527:5..666. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ANASP (Hydroxyacylglutathione hydrolase OS=Anabaena sp. (strain PCC 7120) GN=gloB PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.968e-35
Identity = 82/214 (38.32%), Postives = 121/214 (56.54%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQV--ENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M++  +  L DNY +L+ +     AAVVDP E E +++   Q               DH GGN+K+ +  P +KVYGG+ D  +    QV  + GD+      V  + +  P HT+ HI+YY   +  + P  +F GDTLF  GCG+ FEG+  QM +SL   L SLP+ T+V+C HEYT+KNL FAL+V+  N +LQ++L   + +R  G+ T
Sbjct:    1 MQVIRLAALSDNYIFLLHDSHKNIAAVVDPAEAEPVLKQLAQLKAELVAIFNTHHHNDHVGGNQKLIQKFPQVKVYGGAKDQGRIPGQQVFLQPGDRVQFADRVAEV-IFVPGHTRAHIAYYFPPQTDDTPGELFCGDTLFAGGCGRLFEGTPAQMVESL-TKLRSLPENTRVWCAHEYTLKNLQFALSVDSKNTELQKRLDEVKTKRSQGIAT 212          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_CYAP7 (Hydroxyacylglutathione hydrolase OS=Cyanothece sp. (strain PCC 7424) GN=gloB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.385e-35
Identity = 83/214 (38.79%), Postives = 113/214 (52.80%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGK-EGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            MKIF +P L DNY +L+ +     AAVVDP EPE ++   K+               DH G N  + E  P + VYGG  D   + G    ++ GD+   G     +    P HT+ HI+YY   + E E   +F GDT+F  GCG+ FEG+  QM  SL   L +LP  T+++C HEYT+ NL FALTVEP N+ LQ + +  +  R  G  T
Sbjct:    1 MKIFRLPALSDNYIFLLHDPQRNIAAVVDPAEPEPVLTCLKKLGAELVTIFNTHHHGDHVGANRALIEHFPNLTVYGGEEDRGRIPGQEVFLKEGDRVQFGDRSGEV-FFVPGHTRAHIAYYFPPQGEEETGELFCGDTIFAGGCGRLFEGTPAQMVNSLS-KLRALPDNTRIWCAHEYTLNNLKFALTVEPENIDLQNRFSDVKIARSEGEAT 212          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_CYAP4 (Hydroxyacylglutathione hydrolase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=gloB PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.479e-35
Identity = 83/213 (38.97%), Postives = 115/213 (53.99%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQV--ENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M+I  +P L DNY +L+++   ++AAVVDP     ++E  +                DH GGN+++ +  P   VYGG+ D  +    QV  + GD+ +       + L  P HT+ HI+YY          +F GDTLF  GCG+ FEG+  QM  SL   L  LP  T+V+C HEYT+KNL FALT+EP NV+LQ +LA     RQ   PT
Sbjct:    1 MQIDRLPVLSDNYIFLVLDPERRQAAVVDPAVAAPVLERLRSLQFQLVAIFNTHHHHDHVGGNQELLQHFPTAVVYGGAEDRGRIPGQQVFLQPGDRVNFAQRTAEV-LFVPGHTRAHIAYYFPPVNHSSGELFCGDTLFAGGCGRLFEGTPAQMVNSLN-QLRQLPDNTRVWCAHEYTLKNLQFALTIEPENVELQTRLAQVYLARQHFQPT 211          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ACAM1 (Hydroxyacylglutathione hydrolase OS=Acaryochloris marina (strain MBIC 11017) GN=gloB PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.479e-35
Identity = 81/214 (37.85%), Postives = 113/214 (52.80%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGED-PAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M+I  +P   DNY +++ +     AAVVDP +P+ +++   +               DH GGN  + +  P   VYGG  D   + G  H ++ GD+ S  AH        P HT+ HI+YY     GE+   +F GDTLF  GCG+ FEG+  QM  SL   L +LP+ T+V+C HEYT+KNL FALTV+  N  L+ +    QN R    PT
Sbjct:    1 MQIHRLPAFSDNYIFVLHDPGQNIAAVVDPADPQPVLKKLAELGAELVAIFNTHHHSDHVGGNRTLLQAFPNTVVYGGEQDRGRIPGQQHFLKEGDQVSF-AHRRAEVYFVPGHTRAHIAYYFPPTTGEEWGELFCGDTLFAGGCGRLFEGTPAQMVDSLS-KLRNLPETTRVWCAHEYTLKNLQFALTVDSDNSHLKNRFKQVQNARNLSQPT 212          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: PNKD_HUMAN (Probable hydrolase PNKD OS=Homo sapiens GN=PNKD PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 9.768e-35
Identity = 78/206 (37.86%), Postives = 117/206 (56.80%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQR 642
            +K+  IP L DNY+YLII+   + A  VDP +P  +  + ++              WDH+GGN  +       +VYG   D +   TH + + D  S+G  + + +L TP HT+GH+ Y + G+  + P+ +F+GD LF++GCG+ FEG+AE M  SL   LG L   T ++ GHEY  +NL FA  VEP N+  ++K+ W Q QR
Sbjct:  119 VKVLPIPVLSDNYSYLIIDTQAQLAVAVDPSDPRAVQASIEKEGVTLVAILCTHKHWDHSGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVG-RLQIRALATPGHTQGHLVYLLDGEPYKGPSCLFSGDLLFLSGCGRTFEGNAETMLSSLDTVLG-LGDDTLLWPGHEYAEENLGFAGVVEPENLARERKMQWVQRQR 322          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SYNY3 (Hydroxyacylglutathione hydrolase OS=Synechocystis sp. (strain PCC 6803) GN=gloB PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.768e-35
Identity = 82/214 (38.32%), Postives = 114/214 (53.27%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M I  +P L DNY +L+ +    +AAVVDP E + +++  +                DH G N ++    P ++VYGG  D   + G T  + +GD+ S  A         P HT+GHI+YY     GE    +F GDT+F  GCG+ FEG+  QM QS+   L  LP  T+++C HEYT+ NL FALTV+PSN  LQ++    Q  RQ G  T
Sbjct:    1 MDIHRLPALADNYIFLLHDRQRNQAAVVDPAEAKPVLDCLETLGADLVTIYNTHHHGDHVGANRELLAKYPNLEVYGGVEDQGRIPGQTVFLRDGDRLSF-ADREATVYFVPGHTRGHIAYYFAPGSGETIGDLFCGDTIFAGGCGRLFEGTPAQMVQSIG-KLRQLPDQTRLWCAHEYTLGNLKFALTVDPSNKDLQERFQTVQGDRQRGQAT 212          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SYNJB (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. GN=gloB PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.768e-35
Identity = 83/213 (38.97%), Postives = 113/213 (53.05%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M++  +P L DNY YL+    T  AAVVDP   E ++E   +               DH GGN ++ E  P  +VYG  +D   + G T +++ G+       +  + L  P HT+GHI+YY +    E   +F GDTLF  GCG+ FEG+ EQM  SL   L  LP+ T+V+C HEYT+ NL FALTV+  N  LQ +       RQ G PT
Sbjct:    1 MRVLQLPALRDNYIYLLHNPDTATAAVVDPAVAEPVLEKLAELGAELVAIFNTHHHHDHVGGNRQLLERYPRARVYGSQVDRGRIPGQTVELKAGETVEFAGRLAKV-LFVPGHTRGHIAYYFS----ESGDLFCGDTLFAGGCGRLFEGTPEQMVGSLD-QLRQLPEATRVWCAHEYTLNNLRFALTVDGDNPDLQARYQQVAALRQTGSPT 207          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO21_SCHPO (Probable hydroxyacylglutathione hydrolase C824.07 OS=Schizosaccharomyces pombe GN=SPAC824.07 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.276e-34
Identity = 81/181 (44.75%), Postives = 104/181 (57.46%), Query Frame = 1
Query:   58 DNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXX----WDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTV 588
            +NYAYL+  + TK  A+VDP EPE +I   K+                  +DHAGGNE I    P +KVYGG   N  G T+  ++ + F +G  V V +LHTPCHT+  I YYV+       AVFTGDTLF +GCG+FFEG A+QM  +L   L +LP  T  Y GHEYT  N  F+ T+
Sbjct:   16 NNYAYLLTCDKTKITAIVDPAEPESVIPVIKEKTAKKEIDLQYILTTHHHYDHAGGNEDILSYFPSLKVYGGK--NASGVTYTPKDKEIFKVG-EVQVEALHTPCHTQDSICYYVSSPSKR--AVFTGDTLFTSGCGRFFEGDAKQMDYALNHVLAALPDDTVTYPGHEYTKSNAKFSSTI 191          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ANAVT (Hydroxyacylglutathione hydrolase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gloB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.712e-34
Identity = 80/214 (37.38%), Postives = 120/214 (56.07%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQV--ENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M++  +  L DNY +L+ +     AAVVDP E E +++   Q               DH GGN+++ +  P +KVYGG+ D  +    QV  + GD+      V  + +  P HT+ HI+YY   +  + P  +F GDTLF  GCG+ FEG+  QM +SL   L SLP+ T+V+C HEYT+KNL FAL+V+  N +LQ++    + +R  G+ T
Sbjct:    1 MQVIRLAALSDNYIFLLHDSQKNIAAVVDPAEAEPVLKQLAQLNAELVAIFNTHHHNDHVGGNQQLIQNFPQLKVYGGAEDKGRIPGQQVFLQPGDRVQFTDRVAEV-IFVPGHTRAHIAYYFPPQTADTPGELFCGDTLFAGGCGRLFEGTPAQMVESL-TKLRSLPENTRVWCAHEYTLKNLQFALSVDSENTELQKRFDEVKTKRSQGIAT 212          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_MARMM (Hydroxyacylglutathione hydrolase OS=Maricaulis maris (strain MCS10) GN=gloB PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.269e-34
Identity = 81/214 (37.85%), Postives = 114/214 (53.27%), Query Frame = 1
Query:   25 KMKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            ++ I   PCL DNY +LI +  + E A +D  + + I+  A Q              +DHAGGNE I+ +  G KV     D   + G + +VE+GD  S+G H      +TP HT GH+ Y++      D   F GDTLF  GCG+ FEG+  +M+ SL   L +LP  T++YC HEYT  N  FAL+++P N  LQ   A  + +R  G PT
Sbjct:    3 ELLIRQFPCLSDNYGFLIHDPDSGETATIDTPDADVILNEADQAGWSITQIWNTHHHFDHAGGNETIQALT-GAKVVAPRYDRHRIPGISMEVEDGDVISLGDH-KAKVFYTPGHTMGHVCYHMP----MDGIAFVGDTLFALGCGRLFEGTPAEMWHSLS-RLAALPDETRIYCAHEYTEANARFALSIDPDNHDLQVYAAMVEGERARGEPT 209          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO2_ANASP1.968e-3538.32Hydroxyacylglutathione hydrolase OS=Anabaena sp. (... [more]
GLO2_CYAP74.385e-3538.79Hydroxyacylglutathione hydrolase OS=Cyanothece sp.... [more]
GLO2_CYAP47.479e-3538.97Hydroxyacylglutathione hydrolase OS=Cyanothece sp.... [more]
GLO2_ACAM17.479e-3537.85Hydroxyacylglutathione hydrolase OS=Acaryochloris ... [more]
PNKD_HUMAN9.768e-3537.86Probable hydrolase PNKD OS=Homo sapiens GN=PNKD PE... [more]
GLO2_SYNY39.768e-3538.32Hydroxyacylglutathione hydrolase OS=Synechocystis ... [more]
GLO2_SYNJB9.768e-3538.97Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO21_SCHPO1.276e-3444.75Probable hydroxyacylglutathione hydrolase C824.07 ... [more]
GLO2_ANAVT3.712e-3437.38Hydroxyacylglutathione hydrolase OS=Anabaena varia... [more]
GLO2_MARMM8.269e-3437.85Hydroxyacylglutathione hydrolase OS=Maricaulis mar... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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