FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_RHIEC (Hydroxyacylglutathione hydrolase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=gloB PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.197e-24
Identity = 72/203 (35.47%), Postives = 96/203 (47.29%), Query Frame = 1
Query:   49 CLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYG--GSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAG 651
            C  DN+  L+ +  T   A +D  E   I+EAA +               DH   N  +KE   G ++ G       + G    + +GD F  G H  V  + TP HT GHI Y+      +D  +F  DTLF  GCG+ FE  A  M+ SL   L  LP  T VY GHEYT+ N  FALTV+P N +L+ + A  +  R  G
Sbjct:   11 CRTDNFGVLVHDPETGFTAAIDAPEEAPILEAATRRGWKITHIFTTHHHTDHVAANLALKEQF-GCEIIGPINEAIAIPGLDRTMADGDSFLFGDHT-VKVIETPGHTAGHICYHFV----DDKLLFAADTLFALGCGRLFERPAADMWHSL-QKLAVLPDETAVYFGHEYTLSNARFALTVDPDNERLKSRAAEIEALRAEG 206          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHELP (Hydroxyacylglutathione hydrolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gloB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.563e-24
Identity = 75/210 (35.71%), Postives = 103/210 (49.05%), Query Frame = 1
Query:   43 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPG-IKVYGGSLDNVKGCTHQVENGDKFSIGAHV---NVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            IP   DNY +LI  + +    VVDP + + +++  +Q               DH GG  +++      + VYG   +N+KG  H + +G   S+       +    H P HT GHI+Y +      D  +F GDTLF AGCG+ FEG+  QM+ SL  TL  L + T VY  HEYT  NL FALTVE  N  L    A  +  R   LP+
Sbjct:    7 IPAFNDNYIWLIHAKDSGGHYVVDPGDAKAVLDYLEQHQIVLDGILITHHHSDHTGGIAELQASHDHKLTVYGPDNENIKGINHPI-SGQTESVKPEKLDSDAAVFHLPGHTLGHIAYLI------DDHLFCGDTLFSAGCGRLFEGTPAQMHHSL-QTLAQLDETTLVYPAHEYTQANLAFALTVENDNEALIAHAAKVKQLRDQNLPS 208          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_RHOS4 (Hydroxyacylglutathione hydrolase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=gloB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.563e-24
Identity = 70/213 (32.86%), Postives = 108/213 (50.70%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLD--NVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +++  +PCL DNYA+L+ +  T E +VVD  E   I++A ++               DH  G E+++    G +V G + D   +     ++  GD   +GA    + +  P HT GHI+++      +    FTGD+L   GCG+ FEG+AE M+QSL   L +LP  T +  GHEY   N  FA T+EP +  L  ++      R+ G PT
Sbjct:    3 LELVTVPCLSDNYAFLVHDAGTGETSVVDVPEAGPILKALEERGWHLSQILLTHHHSDHVAGVEELRAAT-GARVAGAAADAHRLPPLDLELAEGDLVRVGASEGRV-IEVPGHTVGHIAFHFP----DSSLAFTGDSLMAMGCGRLFEGTAEAMWQSL-RKLSALPPETMICSGHEYAASNARFAATLEPDSPMLIFRVGSIAAARKEGRPT 208          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_RHOS1 (Hydroxyacylglutathione hydrolase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=gloB PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.042e-24
Identity = 69/213 (32.39%), Postives = 108/213 (50.70%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLD--NVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +++  +PCL DNYA+L+ +  T E +VVD  E   +++A ++               DH  G E+++    G +V G + D   +     ++  GD   +GA    + +  P HT GHI+++      +    FTGD+L   GCG+ FEG+AE M+QSL   L +LP  T +  GHEY   N  FA T+EP +  L  ++      R+ G PT
Sbjct:    3 LELVTVPCLSDNYAFLVHDAGTGETSVVDVPEAGPVLKALEERGWHLSQILLTHHHSDHVAGVEELRAAT-GARVAGAAADAHRLPPLDLELAEGDLVRVGASEGRV-IEVPGHTVGHIAFHFP----DSSLAFTGDSLMAMGCGRLFEGTAEAMWQSL-RKLSALPPETMICSGHEYAASNARFAATLEPDSPMLIFRVGSIAAARKEGRPT 208          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_RHIL3 (Hydroxyacylglutathione hydrolase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=gloB PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.042e-24
Identity = 75/204 (36.76%), Postives = 99/204 (48.53%), Query Frame = 1
Query:   49 CLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAH-VNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAG 651
            C  DN+  L+ +  T   A +D  E   I+EAA +               DH   N  +KE   G ++ G   + V   G    + +GD F  G H VNV+   TP HT GHI Y+      +D  +F  DTLF  GCG+ FE  A  M+ SL   L  LP  T VY GHEYT+ N  FALTV+P N +L+ + A  +  R  G
Sbjct:   11 CRTDNFGVLVHDPETGFTAAIDAPEEAPILEAATRRGWKITHIFTTHHHTDHVTANLALKEQF-GCEIIGPINEAVAIPGLDRAMADGDSFLFGDHTVNVIE--TPGHTAGHICYHFV----DDKLLFAADTLFALGCGRLFERPAADMWHSL-QKLAVLPDETAVYFGHEYTLSNARFALTVDPDNERLKSRAAEIEALRADG 206          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PSESM (Hydroxyacylglutathione hydrolase OS=Pseudomonas syringae pv. tomato GN=gloB PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24
Identity = 66/200 (33.00%), Postives = 109/200 (54.50%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIE-AAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLA 624
            ++I  +P   DNY +L+ + ++++  VVDP +   ++E  A+                DH GG  ++K+     +V G + +++      + + D+ ++     V+    P HT GHI++Y   ++   P +F+GDTLF AGCG+ FEG+  QM+ SL   L +LP  T +YC HEYT+ NL FA  VEP N  + ++LA
Sbjct:    2 IQIHALPAFNDNYIWLLQDLSSQQCVVVDPGDAAPVLEWLAQNPHCRLTDILITHHHNDHVGGVVELKQATRA-RVLGPAAESIPARDVALADHDRLTVLGLEFVVHA-VPGHTLGHIAFY--HEDAAAPLLFSGDTLFAAGCGRLFEGTPGQMHASL-ERLAALPDSTLIYCAHEYTLSNLRFAQAVEPDNQDIAERLA 196          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_TOLAT (Hydroxyacylglutathione hydrolase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=gloB PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.548e-24
Identity = 76/213 (35.68%), Postives = 102/213 (47.89%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQ-VENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +++  IP  +DNY +LI  +   +A VVDP E   +IE  +Q               DH  G  ++  + P   VYG  +        Q + + D  S     +     HTP HT  HI ++  G      A+F GDTLF  GCG+ F G+AEQMY SL   L SLP+ T VY  HEYT  NL + L  EP NV   +++      RQ G PT
Sbjct:    2 LQVQTIPSRQDNYIWLI--KQGNQAIVVDPGESAPVIERLRQQSLNLKAIFVTHHHHDHVDGVAELLALYPQCAVYGPQITLTDVPQLQTMRDQDLISFPDLDLTFTVWHTPGHTAEHIVFHGHG------ALFCGDTLFSGGCGRLFSGTAEQMYHSL-QRLASLPEDTLVYPAHEYTYNNLSYCLQAEPDNVFTIKRIKEVSKLRQQGCPT 205          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHEAM (Hydroxyacylglutathione hydrolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gloB PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.548e-24
Identity = 76/211 (36.02%), Postives = 99/211 (46.92%), Query Frame = 1
Query:   43 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPG----IKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            IP   DNY ++I+      A VVDP +   +I   ++               DH GG  ++++          VYG    +         +GD   I G    V  L  P HT  H+++ V      D A+F GDTLF  GCG+ FEG A Q+Y SL   L SLP  T VYC HEYT+ NL FAL VEP N  LQ  +    N R+A  P+
Sbjct:    7 IPAFADNYIWMIVLPDGG-AVVVDPGDAMPVINTLQRLNLQLTAVLLTHHHRDHNGGINQLRDWAKSNGQSFTVYGAVTSDYSDVL--CRDGDTVDISGLTSPVRVLSVPGHTLDHLAFVV------DNALFCGDTLFSGGCGRLFEGDAGQLYDSLA-KLASLPDDTLVYCAHEYTLSNLRFALAVEPQNQCLQDYVKQVNNLREANKPS 207          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PROMS (Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain AS9601) GN=gloB PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 4.548e-24
Identity = 67/200 (33.50%), Postives = 106/200 (53.00%), Query Frame = 1
Query:   34 IFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLA 624
            I  +  L DN  +L+ ++  K   V+DP   E +I    +               DH GG + + E  P +KV   S +   +      VE+G+  +I G  V ++ +    HT  HI++++ G   E+P +F GDTLF  GCG+ FEG+ +QMY SL   + SLP+ T +YC HEYT  N+L+AL ++P +  ++ KL+
Sbjct:    9 IIGLRVLSDNVIWLMAKD--KSVVVIDPSVHEPVIRYINENNFHLEAILQTHHHSDHIGGTKSLIEKWPNVKVIASSKEKKRIPFQNVSVEDGETLNILGEEVKIIEVLG--HTSSHIAFFLNG---ENPVLFIGDTLFSGGCGRIFEGTYQQMYSSL-ERIKSLPKNTLIYCAHEYTKANILWALNLKPKDQDIKNKLS 200          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_JANSC (Hydroxyacylglutathione hydrolase OS=Jannaschia sp. (strain CCS1) GN=gloB PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.548e-24
Identity = 75/212 (35.38%), Postives = 101/212 (47.64%), Query Frame = 1
Query:   31 KIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLD--NVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +I  IPCL+DNYA+L+ + +T   A +D  +   I  A                 WDH  G   + E   G KV+G + D   +    H +  GD   IGA    + +    HT GH++++         AVFT D+L   GCG+ FEG+  QM+ SL   L  LP  T V  GHEYT  N  FALT+EP N  L  ++      R AG PT
Sbjct:    5 QIITIPCLQDNYAFLLHDPSTGATACIDVPDAAPIQAALGAQGWTLTDILLTHHHWDHIDGVPALVEAT-GAKVWGAAADAHRLPPLDHALAEGDTIRIGALEGDV-MDVSGHTVGHVAFHFPAAT----AVFTADSLMALGCGRLFEGTPAQMHGSL-EKLKMLPPGTLVCSGHEYTASNARFALTIEPDNPDLIFRVERITAARAAGQPT 209          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO2_RHIEC1.197e-2435.47Hydroxyacylglutathione hydrolase OS=Rhizobium etli... [more]
GLO2_SHELP1.563e-2435.71Hydroxyacylglutathione hydrolase OS=Shewanella loi... [more]
GLO2_RHOS41.563e-2432.86Hydroxyacylglutathione hydrolase OS=Rhodobacter sp... [more]
GLO2_RHOS12.042e-2432.39Hydroxyacylglutathione hydrolase OS=Rhodobacter sp... [more]
GLO2_RHIL32.042e-2436.76Hydroxyacylglutathione hydrolase OS=Rhizobium legu... [more]
GLO2_PSESM2.666e-2433.00Hydroxyacylglutathione hydrolase OS=Pseudomonas sy... [more]
GLO2_TOLAT4.548e-2435.68Hydroxyacylglutathione hydrolase OS=Tolumonas auen... [more]
GLO2_SHEAM4.548e-2436.02Hydroxyacylglutathione hydrolase OS=Shewanella ama... [more]
GLO2_PROMS4.548e-2433.50Hydroxyacylglutathione hydrolase OS=Prochlorococcu... [more]
GLO2_JANSC4.548e-2435.38Hydroxyacylglutathione hydrolase OS=Jannaschia sp.... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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