FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_CUPTR (Hydroxyacylglutathione hydrolase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=gloB PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.948e-23
Identity = 79/219 (36.07%), Postives = 103/219 (47.03%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPG------IKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLS-LHTPCHTKGHISYYVT-GKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +K+  IP  +DNY + I +     AAVVDP E   +     Q               DH GG   +    P       + V G + + + G T  +  GD  ++ A    L  L  P HT GHI+Y    G+ G  PA+F GDTLF +GCG+ FEG+  QM  SL   L +LP  T+VYC HEYT  N+ FA  VEP N  L    A  +  R    PT
Sbjct:    2 LKVEPIPAFQDNYIWAIHDGHC--AAVVDPGEAAPVERFLAQSGLALGAIVITHHHGDHQGGVAGLLAAHPRAPSGGPLPVLGPAGERIGGRTQALREGDVATLEAPALTLRVLDVPGHTAGHIAYVADLGEAG--PALFCGDTLFASGCGRLFEGTPAQMLASLD-KLAALPGDTRVYCAHEYTRSNVRFARAVEPGNAALAAWEARVEALRATNQPT 215          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHEB5 (Hydroxyacylglutathione hydrolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=gloB PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.850e-23
Identity = 72/218 (33.03%), Postives = 107/218 (49.08%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPG-IKVYGGSLDNVKGCTHQVENG--DKFSIGAHVNVLS-LHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLPT 660
            + I  I    DNY +++ ++   +  VVDP +   +I+  +                DH GG  +++      + VYG   + ++G TH +      +F +      L  L  P HT GHI+Y +        A+F GDTLF AGCG+ FEG+  QM  SL   L  LP  T+VYC HEYT+ NL FAL V P+N  LQ   ++    + Q +A +P+
Sbjct:    2 LTITAIKAFNDNYIWVLQQQPHTQVYVVDPGDASVVIDYLEANQLTLAGILLTHHHNDHTGGVAELQAYSQNRLTVYGPDNEKIEGITHPLNATAQPRFILDYMSGELQVLDVPGHTAGHIAYVIAD------ALFCGDTLFSAGCGRLFEGTPAQMLNSL-QQLAQLPADTRVYCAHEYTLSNLKFALAVNPNNRALQDYNERAVALRRQDKATIPS 212          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_NEIG1 (Hydroxyacylglutathione hydrolase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=gloB PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.850e-23
Identity = 72/203 (35.47%), Postives = 97/203 (47.78%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQN 636
            MKI  +  L DNY ++I  +    A  VDP EP  ++E   +               DH GG   +        VYG S  +++  TH V  G +F+ G +  V    TP HT  H SY +   +G    VF GDTLF AGCG+ F G+ EQ+Y +       LP+ T  Y  HEYT  NL FA  +EP N  +Q  L  A++
Sbjct:    1 MKITPVKALTDNYIWMI--QHGNHAVCVDPSEPSPVLEFLVRNRLMLAQTWVTHPHPDHEGGAAALWRGYMESPVYGES--DIEAATHTVTAGTRFTFG-NGQVTVWATPGHTDRHTSYLLETSDGIH--VFCGDTLFSAGCGRVFTGTVEQLYDNF-QRFNQLPEGTLFYPAHEYTAANLRFAAHIEPDNADIQTALKAAEH 195          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_RHOBL (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas blastica GN=gloB PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.028e-23
Identity = 66/210 (31.43%), Postives = 103/210 (49.05%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLD--NVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAG 651
            + +  +PCL+DN+A+L+ +  +   A+VD  E   ++ A                  DH     +I     G +V+G + D   +    H +  GD+ +IGA   V+ +  P HT+GHI+++  G        FTGD+L  AGCG+ FEG+  +M+ SL   L +LP  T +  GH+Y   NL FAL +EP N  L  +       R+ G
Sbjct:    3 LNLLTVPCLKDNFAFLLHDAASGRTALVDAPEAAPVLSALAAQGWRLTDILLTHHHDDHIQAVPEI-HAATGARVHGAAADAHRLPPLDHALREGDRVAIGAESAVV-IDVPGHTRGHIAFHFPGSA----LAFTGDSLMAAGCGRLFEGTPAEMWASLS-KLAALPPETLICSGHDYLDGNLRFALALEPGNPALISRQGRLSEMRREG 205          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PROM1 (Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain NATL1A) GN=gloB PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.028e-23
Identity = 68/218 (31.19%), Postives = 112/218 (51.38%), Query Frame = 1
Query:   10 LEQRIKMKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGL 654
            L ++    I  I  L+DN  ++ +      A VVDP     + +   +               DH GG +K+ +  P  KV     ++  +   T  V++ D F++  A + V+ +H   HT  HI++Y++ +  +   +F GDTLF  GCG+  EGS  QM++SL   L SLP+ T++Y  HEYT  NL +AL++EP N+ + ++L   Q + Q G+
Sbjct:    2 LGEKSDFTIHPINVLQDNIVWVWVHNCN--AVVVDPSISGPVEKWLLEKNLSLKAILQTHHHDDHIGGTQKLIKTWPEAKVVASKKEHKRIPFQTFSVDDNDIFNLMDAEIKVIEVHG--HTDNHIAFYISKQNAKCNILFPGDTLFGGGCGRLLEGSPVQMFESL-YKLNSLPENTEIYPAHEYTESNLKWALSLEPGNISIIERLKLIQKKLQKGM 214          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHEB8 (Hydroxyacylglutathione hydrolase OS=Shewanella baltica (strain OS185) GN=gloB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.567e-23
Identity = 71/218 (32.57%), Postives = 106/218 (48.62%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPG-IKVYGGSLDNVKGCTHQVENG--DKFSIGAHVNVLS-LHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLPT 660
            + I  I    DNY +++ ++   +  VVDP +   +I+  +                DH GG  +++      + VYG   + ++G TH +      +F +      L  L  P HT GHI+Y +        A+F GDTLF  GCG+ FEG+  QM  SL   L  LP  T+VYC HEYT+ NL FAL V P+N  LQ   ++    + Q +A +P+
Sbjct:    2 LTITAIKAFNDNYIWVLQQQPHTQVYVVDPGDASVVIDYLEANKLTLAGILLTHHHNDHTGGVAELQAYSQNRLSVYGPDNEKIEGITHPLHATAQPRFILDYMSGELQVLDVPGHTAGHIAYVIAD------ALFCGDTLFSGGCGRLFEGTPAQMLNSL-QQLAQLPADTRVYCAHEYTLSNLKFALAVNPNNRALQDYNERAIALRRQEKATIPS 212          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PROMT (Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain NATL2A) GN=gloB PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 6.567e-23
Identity = 68/218 (31.19%), Postives = 112/218 (51.38%), Query Frame = 1
Query:   10 LEQRIKMKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGL 654
            L ++    I  I  L+DN  ++ +      A VVDP     + +   +               DH GG +K+ +  P  KV     ++  +   T  V++ D F++  A + V+ +H   HT  HI++Y++ +  +   +F GDTLF  GCG+  EGS  QM++SL   L SLP+ T++Y  HEYT  NL +AL++EP N+ + ++L   Q + Q G+
Sbjct:    2 LGKKSDFTIHPINVLQDNIVWVWVHNCN--AVVVDPSISGPVEKWLLEKNLSLKAILQTHHHDDHIGGTQKLIKTWPEAKVVASKKEHKRIPFQTFSVDDNDIFNLMDAEIKVIEVHG--HTDNHIAFYISKQNAKCNILFPGDTLFGGGCGRLLEGSPVQMFESL-YKLNSLPENTEIYPAHEYTESNLKWALSLEPGNISIIERLKLIQKKLQKGM 214          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_NITWN (Hydroxyacylglutathione hydrolase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=gloB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.567e-23
Identity = 69/205 (33.66%), Postives = 97/205 (47.32%), Query Frame = 1
Query:   49 CLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLD-NVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            CL DN+  LI +  T   A +D  E E +I+A  +               DH GG  ++K       V        +     +V  GD   +G  +  + L TP HT  H+SY       ++  VF  DTLF  GCG+ FEG+   M+ SL + L +LP   ++YCGHEYT  N+ FALT+EP+N  L+ +       R  G PT
Sbjct:   10 CLTDNFGVLIHDPATGATAAIDAPEAEPVIQALDREGWVLTDILITHHHSDHVGGVAELKRKYACRVVAPHDRSAEIANVDLRVGQGDIIKVGTLLGRV-LETPGHTLDHVSYVFD----DEKVVFAADTLFSIGCGRVFEGTYPMMWDSL-LKLRALPDSFRLYCGHEYTDSNIKFALTIEPNNPVLKARAEEVTRLRAEGRPT 208          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_NEIMA (Hydroxyacylglutathione hydrolase OS=Neisseria meningitidis serogroup A GN=gloB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.567e-23
Identity = 74/203 (36.45%), Postives = 97/203 (47.78%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIG-AHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQ 633
            MKI  +  L DNY ++I  +    A  VDP EP  ++E   +               DH GG   +        VYG S  +++  TH V  G +F+ G   V V +  TP HT  H SY +   +G    VF GDTLF AGCG+ F G+ EQ+Y S       LP+ T  Y  HEYT  NL FA  +EP N  +Q  L  A+
Sbjct:    1 MKITPVKALTDNYIWMI--QHGNHAVCVDPSEPSPVLEFLVRNRLMLAQTWVTHPHPDHEGGAAALWRGYMESPVYGES--DIEAATHTVTAGTQFTFGDGQVTVWA--TPGHTDRHTSYLLETSDGIH--VFCGDTLFSAGCGRVFTGTIEQLYDSF-QRFNRLPENTLFYPAHEYTAANLRFAAHIEPDNADIQTALKAAE 194          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_MARMS (Hydroxyacylglutathione hydrolase OS=Marinomonas sp. (strain MWYL1) GN=gloB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.567e-23
Identity = 67/211 (31.75%), Postives = 105/211 (49.76%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M IF +P   DNY ++I ++ +     VDP + + ++    +               DH GG  ++K+      VYG      +  TH V++GD+  + + V  + + TP HT  H+ Y+    E E P + +GDTLF  GCG+  EG+ EQM  ++ + +  LP  T +Y  HEYT+ N  FAL++EP+N  L +     Q  R    PT
Sbjct:    1 MTIFPLPAFNDNYIWIIQDKDSSGIWAVDPGKADVVLNFCHEYQKTLTGILITHHHKDHTGGVAELKQH-SNCPVYGPE-HLTELVTHPVDDGDRILVFSKVFTV-IATPGHTLDHLCYF---SEQETPILLSGDTLFKGGCGRIMEGTHEQMLAAM-IKISGLPNDTLIYGTHEYTLANYRFALSLEPNNKDLIESNITCQKLRTEEKPT 204          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO2_CUPTR2.948e-2336.07Hydroxyacylglutathione hydrolase OS=Cupriavidus ta... [more]
GLO2_SHEB53.850e-2333.03Hydroxyacylglutathione hydrolase OS=Shewanella bal... [more]
GLO2_NEIG13.850e-2335.47Hydroxyacylglutathione hydrolase OS=Neisseria gono... [more]
GLO2_RHOBL5.028e-2331.43Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]
GLO2_PROM15.028e-2331.19Hydroxyacylglutathione hydrolase OS=Prochlorococcu... [more]
GLO2_SHEB86.567e-2332.57Hydroxyacylglutathione hydrolase OS=Shewanella bal... [more]
GLO2_PROMT6.567e-2331.19Hydroxyacylglutathione hydrolase OS=Prochlorococcu... [more]
GLO2_NITWN6.567e-2333.66Hydroxyacylglutathione hydrolase OS=Nitrobacter wi... [more]
GLO2_NEIMA6.567e-2336.45Hydroxyacylglutathione hydrolase OS=Neisseria meni... [more]
GLO2_MARMS6.567e-2331.75Hydroxyacylglutathione hydrolase OS=Marinomonas sp... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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