FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SYNPW (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain WH7803) GN=gloB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.577e-23
Identity = 66/199 (33.17%), Postives = 102/199 (51.26%), Query Frame = 1
Query:   43 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVT---GKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKL 621
            +P L+DN  +  I     EA VVDP   E +IEA +Q               DH GG   +    P   V     D   +   T  V  G +F++ G  V+V+ +    HT  H+++++       G  PA+F GDTLF  GCG+ FEG+ + M+++L  TL +LP+ T++YC HEYT  NL +A  ++P +  ++ +L
Sbjct:   13 LPVLQDNIIW--IWSCGSEAVVVDPAVAEPVIEALQQKGLTLIAVLQTHHHADHIGGTPDLLRQWPDAAVIASGQDRGRIPFQTQPVAAGTRFTLLGVPVDVIDVRA--HTSAHLAFFLPEGCSPGGHPPALFCGDTLFSGGCGRLFEGTPDDMHRAL-QTLATLPESTRIYCAHEYTEGNLRWAHALQPEDRAIKARL 206          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PSYIN (Hydroxyacylglutathione hydrolase OS=Psychromonas ingrahamii (strain 37) GN=gloB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.577e-23
Identity = 66/211 (31.28%), Postives = 100/211 (47.39%), Query Frame = 1
Query:   34 IFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKI-KEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +  I   EDNY +LI +  ++   +VDP +   ++   +               +DH GG + +       I +Y  S   +      V   D  S     +++  +  P HT  H+++Y       D  +F GDTLF  GCG+ FEGS EQM++++   L  LP+ T+VYC HEYT  NL+FA  +EP N  L   +     +RQ G PT
Sbjct:    4 VITIKAFEDNYIWLIKDSQSQHCIIVDPGDAAPVLTILEDQKLIVDAILLTHHHYDHIGGVDALLSARDEKISIY--SKKKLFDRCRLVNESDTLSFFDGKLSLQVMEVPGHTLDHVAFY------NDELLFCGDTLFSGGCGRVFEGSFEQMFKAVS-RLALLPENTKVYCAHEYTQNNLIFAHQIEPKNKALLNYIQQVSKKRQQGQPT 205          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SYNPX (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain WH8102) GN=gloB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.120e-22
Identity = 69/208 (33.17%), Postives = 105/208 (50.48%), Query Frame = 1
Query:   43 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGED--PAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAG 651
            +P L+DN  ++ +     EAAVVDP   E +I+  +Q               DH GG   + E  P   V     D   +   T  V +GD+ ++ G  + VL +    HT  HI++ +  +E  D  P VF GDTLF  GCG+ FEG+   M+++L   L  LP+ T+V C HEYT  NLL+A+  +P +  ++Q+     + R+ G
Sbjct:    8 LPVLQDNVLWIWVRGD--EAAVVDPAVAEPVIDWLQQRQLQLSAVLQTHHHADHIGGTPGLLERWPDAAVVAAGADRSRIPFQTISVSDGDQVTVLGRSLQVLDV--AAHTSAHIAFVIPEQEDPDLGPVVFCGDTLFSGGCGRLFEGTPADMHRAL-RRLSELPESTKVCCAHEYTEGNLLWAIQQQPQDAAIRQRYDAVVDLRRRG 210          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHEB9 (Hydroxyacylglutathione hydrolase OS=Shewanella baltica (strain OS195) GN=gloB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.120e-22
Identity = 71/218 (32.57%), Postives = 107/218 (49.08%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPG-IKVYGGSLDNVKGCTHQVENG--DKFSIGAHVNVLS-LHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLPT 660
            + I  I    DNY +++ ++   +  VVDP +   +I+  +                DH GG  +++      + VYG   + ++G TH +      +F++      L  L  P HT GHI+Y +        A+F GDTLF  GCG+ FEG+  QM  SL   L  LP  T+VYC HEYT+ NL FAL V P+N  LQ   ++    + Q +A +P+
Sbjct:    2 LTITAIKAFNDNYIWVLQQQPHTQVYVVDPGDASVVIDYLEANQLTLVGILLTHHHNDHTGGVAELQAYSQDRLTVYGPDNEKIEGITHPLHATAQPRFTLDYISGELQVLDVPGHTAGHIAYVIAD------ALFCGDTLFSGGCGRLFEGTPAQMLNSL-QQLAQLPAYTRVYCAHEYTLSNLKFALAVNPNNCALQDYNERAIALRRQDKATIPS 212          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_NEIMB (Hydroxyacylglutathione hydrolase OS=Neisseria meningitidis serogroup B GN=gloB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.120e-22
Identity = 73/199 (36.68%), Postives = 95/199 (47.74%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIG-AHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKL 621
            MKI  +  L DNY ++I  +    A  VDP EP  ++E   +               DH GG   +        VYG S  +++  TH V  G +F+ G   V V +  TP HT  H SY +   +G    VF GDTLF AGCG+ F G+ EQ+Y S       LP+ T  Y  HEYT  NL FA  +EP N  +Q  L
Sbjct:    1 MKITPVKALTDNYIWMI--QHGNHAVCVDPSEPSPVLEFLVRNRLMLAQTWVTHPHPDHEGGAAALWRGYMESPVYGES--DIEAATHTVTAGTQFTFGDGQVTVWA--TPGHTDRHTSYLLETSDGIH--VFCGDTLFSAGCGRVFTGTIEQLYDSF-QRFNRLPENTLFYPAHEYTAANLRFAAHIEPDNADIQTAL 190          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_NEIM0 (Hydroxyacylglutathione hydrolase OS=Neisseria meningitidis serogroup C (strain 053442) GN=gloB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.120e-22
Identity = 73/199 (36.68%), Postives = 95/199 (47.74%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIG-AHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKL 621
            MKI  +  L DNY ++I  +    A  VDP EP  ++E   +               DH GG   +        VYG S  +++  TH V  G +F+ G   V V +  TP HT  H SY +   +G    VF GDTLF AGCG+ F G+ EQ+Y S       LP+ T  Y  HEYT  NL FA  +EP N  +Q  L
Sbjct:    1 MKITPVKALTDNYIWMI--QHGNHAVCVDPSEPSPVLEFLVRNRLMLAQTWVTHPHPDHEGGAAALWRGYMESPVYGES--DIEAATHTVTAGTQFTFGDGQVTVWA--TPGHTDRHTSYLLETSDGIH--VFCGDTLFSAGCGRVFTGTIEQLYDSF-QRFNRLPENTLFYPAHEYTAANLRFAAHIEPDNADIQTAL 190          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_BARQU (Hydroxyacylglutathione hydrolase OS=Bartonella quintana GN=gloB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.463e-22
Identity = 69/200 (34.50%), Postives = 98/200 (49.00%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKL 621
            M I    C EDN+  LI +E +   A +D  E + I  A K+               DH     ++K++   + V G   +  K       ++  +    G H  +L+L TP HT G +SYY      ++  +F+GDTLF  GCG+ FEG+  QM  S    L  LP  T +YCGHEYT  N LFALT++  N KL Q++
Sbjct:    1 MLIEQFICREDNFGVLIHDERSGYTAAIDAPESKAICSALKRRNWTLQTIFVTHHHHDHIEALAELKQIYKAV-VIGPEAEKEKIGHLDQALQPDESLFFGTHT-LLALSTPGHTLGSLSYYFP----QENLLFSGDTLFSLGCGRLFEGTPAQMLNSF-KKLRQLPDETLLYCGHEYTKTNALFALTLDSHNQKLHQRV 193          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_NEIMF (Hydroxyacylglutathione hydrolase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=gloB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.911e-22
Identity = 73/199 (36.68%), Postives = 95/199 (47.74%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIG-AHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKL 621
            MKI  +  L DNY ++I  +    A  VDP EP  ++E   +               DH GG   +        VYG S  +++  TH V  G +F+ G   V V +  TP HT  H SY +   +G    VF GDTLF AGCG+ F G+ EQ+Y S       LP+ T  Y  HEYT  NL FA  +EP N  +Q  L
Sbjct:    1 MKITPVKALTDNYIWMI--QHGNHAVCVDPSEPSPVLEFLVRNRLMLAQTWVTHPHPDHEGGAAALWRGYMESPVYGES--DIEAATHTVTAGTQFTFGDGQVTVWA--TPGHTDRHTSYLLETSDGIH--VFCGDTLFSAGCGRVFTGTIEQLYDSF-QRFNRLPENTLFYPAHEYTAANLDFAAHIEPDNADIQTAL 190          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SYNSC (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain CC9605) GN=gloB PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.496e-22
Identity = 67/208 (32.21%), Postives = 106/208 (50.96%), Query Frame = 1
Query:   43 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGED--PAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAG 651
            +P L+DN  ++ +     EA V+DP     +    ++               DH GG  ++ +  P  +V   + D   +   T  V  GD  ++ G  V V+ +    HT+ HI++++   +G +  P +F GDTLF  GCG+ FEGSAEQM+Q+L   L  LP+ TQV C HEYT  NL +A+  +P+N  L ++    ++ R  G
Sbjct:    8 LPVLQDNVIWIWVRGA--EAVVIDPAVAPPVRAWLEKRQLSLAAVLQTHHHADHIGGTPELLQRWPEAEVIASADDRERIPFQTMPVRGGDHVTVLGETVEVMDV--AAHTRAHIAFFLPNPKGAEIRPLLFCGDTLFSGGCGRLFEGSAEQMHQAL-QKLAELPEATQVCCAHEYTEANLQWAVAQQPNNTVLVERYREVRSLRAKG 210          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_RHOCA (Hydroxyacylglutathione hydrolase OS=Rhodobacter capsulatus GN=gloB PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.496e-22
Identity = 70/213 (32.86%), Postives = 103/213 (48.36%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLD--NVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +++  IPCL DNYA+L  +  T    VVD  E   +++                   DH  G E + +   G KV G + D   +    H V  GD   +G     + +    HT GHI++Y+ G       +F+GD+L   GCG+ FEG+  QM+ +L   L +LP  T+V  GHEYT  N  FAL++EP N +L  ++      R AG P+
Sbjct:    3 LELTPIPCLTDNYAWLWHDTATDTVVVVDVPEAAPVLKVLTDRRWQLHHILITHHHADHIAGVEALAQAT-GAKVAGAAADAHRLPPLDHPVAPGDVLHLGMEAAQV-IAADGHTLGHIAWYLPGAG----LLFSGDSLMSWGCGRLFEGTPAQMFDTL-TRLAALPPETRVCSGHEYTAANGRFALSLEPGNGRLHDRMDRVTALRLAGEPS 208          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO2_SYNPW8.577e-2333.17Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_PSYIN8.577e-2331.28Hydroxyacylglutathione hydrolase OS=Psychromonas i... [more]
GLO2_SYNPX1.120e-2233.17Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_SHEB91.120e-2232.57Hydroxyacylglutathione hydrolase OS=Shewanella bal... [more]
GLO2_NEIMB1.120e-2236.68Hydroxyacylglutathione hydrolase OS=Neisseria meni... [more]
GLO2_NEIM01.120e-2236.68Hydroxyacylglutathione hydrolase OS=Neisseria meni... [more]
GLO2_BARQU1.463e-2234.50Hydroxyacylglutathione hydrolase OS=Bartonella qui... [more]
GLO2_NEIMF1.911e-2236.68Hydroxyacylglutathione hydrolase OS=Neisseria meni... [more]
GLO2_SYNSC2.496e-2232.21Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_RHOCA2.496e-2232.86Hydroxyacylglutathione hydrolase OS=Rhodobacter ca... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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