FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHEON (Hydroxyacylglutathione hydrolase OS=Shewanella oneidensis GN=gloB PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.257e-22
Identity = 73/221 (33.03%), Postives = 104/221 (47.06%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPG-----IKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLS-----LHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            + I  I    DNY +++ ++T +   VVDP +   +++                   DH GG   +   V       + VYG   + ++G    +E   + +   H+  L+     L  P HT GHI+Y V G      A+F GDTLF  GCG+ FEG+  QM  SL + L +LP  T+VYC HEYT+ NL FA   +PSN KL+     A   R  G  T
Sbjct:    2 LTITAINAFNDNYIWVLQQDTQQAVYVVDPGDVNVVLDYLNAHQLTLAGILITHHHRDHTGGIAALVAYVEQTTGHTLAVYGPQSEAIQGVNIAIE--PQITQILHLPFLNSPVQVLSVPGHTAGHIAYLVDG------ALFCGDTLFSGGCGRLFEGTPAQMCHSLRL-LAALPAETRVYCAHEYTLANLKFAQAADPSNAKLKAYNEQATALRAQGKAT 213          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_BUCAP (Hydroxyacylglutathione hydrolase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=gloB PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.257e-22
Identity = 67/214 (31.31%), Postives = 107/214 (50.00%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  I  L+DNY +++  +      ++DP   E II+  ++               DH GG E+I    P + V+G      +     V+ GD   +  + ++V    TP HT GH+SYY+       P +F GDTLF  GCG+ F+     MYQS+   + SLP+ T + C HEYT+ NL FA+++ P + K++   +K+    +Q +  LP
Sbjct:    1 MILTSISVLKDNYVWILYNDNCS-CIIIDPGVSEDIIKKIEKKNWKLIAILLTHNHIDHVGGVEEIIRRYPNVTVFGPEETKTRNVNKIVKQGDVIKLLKSEIHVFL--TPGHTLGHVSYYLK------PYIFCGDTLFSGGCGRVFKNKFFDMYQSINF-IKSLPKKTILCCSHEYTLSNLNFAMSILPFDKKIKKYYKKIKKHISQNKTSLP 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHEB2 (Hydroxyacylglutathione hydrolase OS=Shewanella baltica (strain OS223) GN=gloB PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.261e-22
Identity = 69/218 (31.65%), Postives = 104/218 (47.71%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPG-IKVYGGSLDNVKGCTHQVENGDKFSIGAHV---NVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLPT 660
            + I  I    DNY +++ ++   +  VVDP +   +I+  +                DH GG  +++      + VYG   + ++G TH +    +  +        +  L  P HT GHI+Y +        A+F GDTLF  GCG+ FEG+  QM  SL   L  LP  T+VYC HEYT  NL FAL V P+N  LQ   ++    + Q +A +P+
Sbjct:    2 LTITAIKAFNDNYIWVLQQQPHTQVYVVDPGDASVVIDYLEANQLTLAGILLTHHHNDHTGGVAELQAYSQDRLTVYGPDNEKIEGITHPLNATAQPRLTLDYMSGELQVLDVPGHTAGHIAYVIAD------ALFCGDTLFSGGCGRLFEGTPAQMLNSL-QQLAQLPADTRVYCAHEYTFSNLKFALAVNPNNRALQDYNERAIALRRQDKATIPS 212          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_NITHX (Hydroxyacylglutathione hydrolase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=gloB PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.261e-22
Identity = 69/205 (33.66%), Postives = 95/205 (46.34%), Query Frame = 1
Query:   49 CLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVP-GIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            CL DN+  LI +  T   A +D  E   IIEA  +               DH GG  ++K+     +         +     +V  GD   +G  +  + L TP HT  HISY       ++  VF  DTLF  GCG+  EG+   M+ SL + L +LP   ++YCGHEYT  N+ FALTVEP+N  L+ +       R    PT
Sbjct:   10 CLTDNFGVLIHDPATDATAAIDAPEAGPIIEALDREGWTLTDILVTHHHADHIGGIAELKQKYKCRVVAPHDKKAPIANVDLRVGQGDIVKVGTLLGRV-LETPGHTLDHISYVFD----DEKVVFAADTLFSIGCGRVIEGTYPMMWDSL-LKLRALPDDFRLYCGHEYTASNVKFALTVEPNNAALKARAEDVARLRAENKPT 208          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_BRASB (Hydroxyacylglutathione hydrolase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=gloB PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.239e-21
Identity = 71/206 (34.47%), Postives = 95/206 (46.12%), Query Frame = 1
Query:   49 CLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYG--GSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            CL DN+ YLI +  T   A VD  E   II   +                DH G   ++K+   G +V         +     +V +GD   +G  +    L TP HT  H+SY        D AVF  DTLF  GCG+ FEG+   M+ SL + L +LP   ++YCGHEYT  N+ FALTV+  N  L+ + A     R A   T
Sbjct:   10 CLSDNFGYLIHDPATGATASVDAPEAGPIIRQLEAAGWTLTDILITHHHHDHVGAVAELKQKY-GCRVVAPHDKTTAIADVDLRVGHGDVIKVG-ELLARVLETPGHTLDHVSYVFDA----DKAVFAADTLFSVGCGRVFEGTYPMMWDSL-LKLRALPDDFRLYCGHEYTASNVKFALTVDGDNEALKARAAEVTRLRAANEST 208          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_AGRT5 (Hydroxyacylglutathione hydrolase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=gloB PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.239e-21
Identity = 69/203 (33.99%), Postives = 97/203 (47.78%), Query Frame = 1
Query:   49 CLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYG--GSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQA 648
            C  DN+  L+ +  +   A +D  E   I+ A                  DH   N  +K+     +V+G       + G      +GD+F   G  V V++  TP HT GHI YY+     +D  +F  DTLF  GCG+ FE  A  M+ S    L +LP  T+VY GHEYT+ N  FALTV+P N  L+++ A  +  RQA
Sbjct:   11 CRSDNFGVLLHDPESGATAAIDAPEEGPILRALDGHGWKLTHIFTTHHHQDHVEANLVLKDKFR-CEVHGPYDEAIAIPGLDRSQADGDEFEFAGRRVQVIA--TPGHTAGHICYYLP----DDGLLFAADTLFAMGCGRLFERPAADMWHSF-QKLMALPDDTRVYFGHEYTLSNARFALTVDPDNAVLRERAARVETARQA 205          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SODGM (Hydroxyacylglutathione hydrolase OS=Sodalis glossinidius (strain morsitans) GN=gloB PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.113e-21
Identity = 68/215 (31.63%), Postives = 103/215 (47.91%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHV-NVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSN---VKLQQKLAWAQNQRQAGLPT 660
            M +  IP L DNY +L+  +  +   VVDP +   +++A                  DH GG  ++ +  P + VYG      KG T  V  GD  ++  H  ++++L  P HT GHI +Y        P +F GDT+F AG G+ FEG+  QMY+S    +  L   T +   HEYT+ NL FA  + P +      Q+K+   + + Q  +PT
Sbjct:    1 MNLISIPALADNYIWLLHNDD-RRCLVVDPGDATPVLQALADHRLTPVAVLLTHHHQDHVGGVSELLQHFP-VPVYGPEETRSKGATQIVNEGDSLTLLDHTFSIMAL--PGHTLGHIGFYSA------PWLFCGDTVFSAGSGRLFEGTPRQMYESF-QKVNQLSSATLICAAHEYTLSNLNFAAALLPQDSVITDYQRKIKELRLKNQPSMPT 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_STRM5 (Hydroxyacylglutathione hydrolase OS=Stenotrophomonas maltophilia (strain R551-3) GN=gloB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.604e-21
Identity = 62/198 (31.31%), Postives = 104/198 (52.53%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKF-SIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQK 618
            M++  +    DNY +++I++    A VVDP +   ++  A Q               DH GG   ++   PG++V     + +   T +V  G++  ++G   +VLS+  P HT+ HI+++          +F+GD+LF  GCG+ FEG+  Q+  S+ + LG+LP    + C HEYTV N +FA  V+P+N  L Q+
Sbjct:    1 MRLTALTAFADNYIWMLIDDDGA-AVVVDPGDAAPVLALADQGLRVDSILLTHHHD-DHIGGVPALQARFPGVRVIAPVEERIPTATERVGEGERVQALGRMFHVLSV--PGHTRSHIAFHTAEH------LFSGDSLFSLGCGRLFEGTPSQLLASM-LKLGALPAQLLLCCAHEYTVSNAVFARHVDPANAALWQR 187          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO4_YEAST (Hydroxyacylglutathione hydrolase, mitochondrial OS=Saccharomyces cerevisiae GN=GLO4 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.147e-21
Identity = 60/184 (32.61%), Postives = 99/184 (53.80%), Query Frame = 1
Query:   61 NYAYLIIEETTKEAAVVDPVEPEKII-EAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMV------PGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSL-CVTLGSLPQ----PTQVYCGHEYTVKNLLF 576
            NY+YL+  E  + + ++DP EP ++  + + +              +DH+GGN  +  ++        IK+ GGS  +  G T   +N  ++ +G ++ V  + TPCHTK  I YY+   E  +  +FTGDTLF+AGCG+FFEG+   M  +L  + L ++ +      ++Y GHEYT  N+ F
Sbjct:   26 NYSYLLSTEDRRNSWLIDPAEPLEVSPKLSAEEKKSIDAIVNTHHHYDHSGGNLALYSILCQENSGHDIKIIGGSKSS-PGVTEVPDNLQQYHLG-NLRVTCIRTPCHTKDSICYYIKDLETGEQCIFTGDTLFIAGCGRFFEGTGRDMDMALNQIMLRAVGETNWNKVKIYPGHEYTKGNVSF 207          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_WIGBR (Hydroxyacylglutathione hydrolase OS=Wigglesworthia glossinidia brevipalpis GN=gloB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.028e-21
Identity = 72/195 (36.92%), Postives = 92/195 (47.18%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKL 609
            M +  I   EDNY +L+     K   +VDP E   I    K+               DH  G E +K       VYG       G T  V+ GD+ F +     V  L  P HT GH+ +Y        P  F GDTLF AGCG+ FEGSA+ MY S+   + SLP  T +  GHEYT++NL FA++V P N  L
Sbjct:    1 MNLVSISINEDNYIWLLYNND-KNCIIVDPGEFISIHNICKKKKLTPVAIFLTHHHHDHVDGVESLKTYF-NTPVYGPKETIKYGTTKIVKEGDEIFLLNKCFKVFEL--PGHTLGHVGFY------SPPWFFCGDTLFSAGCGRLFEGSAKDMYFSI-KKINSLPPNTLICAGHEYTLQNLNFAISVFPKNTIL 184          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO2_SHEON4.257e-2233.03Hydroxyacylglutathione hydrolase OS=Shewanella one... [more]
GLO2_BUCAP4.257e-2231.31Hydroxyacylglutathione hydrolase OS=Buchnera aphid... [more]
GLO2_SHEB27.261e-2231.65Hydroxyacylglutathione hydrolase OS=Shewanella bal... [more]
GLO2_NITHX7.261e-2233.66Hydroxyacylglutathione hydrolase OS=Nitrobacter ha... [more]
GLO2_BRASB1.239e-2134.47Hydroxyacylglutathione hydrolase OS=Bradyrhizobium... [more]
GLO2_AGRT51.239e-2133.99Hydroxyacylglutathione hydrolase OS=Agrobacterium ... [more]
GLO2_SODGM2.113e-2131.63Hydroxyacylglutathione hydrolase OS=Sodalis glossi... [more]
GLO2_STRM53.604e-2131.31Hydroxyacylglutathione hydrolase OS=Stenotrophomon... [more]
GLO4_YEAST6.147e-2132.61Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_WIGBR8.028e-2136.92Hydroxyacylglutathione hydrolase OS=Wigglesworthia... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
back to top