FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SYNS9 (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain CC9902) GN=gloB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.514e-19
Identity = 64/210 (30.48%), Postives = 98/210 (46.67%), Query Frame = 1
Query:   43 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGC--THQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPA----VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAG 651
            +P L+DN  +  I    K A VVDP   E + +                   DH GG   +    P  +V   + D ++    T  V +GD  ++ G  + V+ +    HT  HI++ +   + +DP+     F GDTLF  GCG+ FEGSA+ MY++L     +LP  T V C HEYT  NL +A    P++V++  +    +  R  G
Sbjct:    8 LPVLQDNVIW--IWARGKNAVVVDPAVAEPVNQWLNAHGMCLRAILQTHHHADHIGGTPDLLREWPQAEVVAATADRLRIPLQTRGVADGDVINLLGRRLEVIDV--AAHTSAHIAFIIRNDDDQDPSFGPLAFCGDTLFAGGCGRLFEGSAQDMYRAL-QRFAALPDETLVCCAHEYTEANLRWATEQRPNDVQITTRHQTVKALRSRG 212          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_HAEDU (Hydroxyacylglutathione hydrolase OS=Haemophilus ducreyi GN=gloB PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.813e-19
Identity = 63/211 (29.86%), Postives = 103/211 (48.82%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +KI  IP L+DNY + I  +  +E  +VDP + + +     +               DH GG   ++   P + +YG S +  +   H V+ GD   +  + +V  +++  HT  HIS+    +      +F GD LF AGCG+ F G  +  + +L     +LP+ T V+  HEYT+ NL FA +V P+N  +++  A A+  R    PT
Sbjct:    2 LKITAIPALQDNYIWAI--QQGQEVMIVDPAQADPVFHFLAKNKLNLTTILITHYHQDHIGGIAGLQATYPDLTIYG-SHEVAQYVNHIVQAGDHLHL-LNSDVEVINSAGHTAQHISFLFAQQY-----LFCGDALFSAGCGRVFTGDYQAQFNTL-QRFKTLPESTLVFPAHEYTLTNLKFAASVLPNNNDIREAQARAETLRAQQQPT 202          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_POLSJ (Hydroxyacylglutathione hydrolase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=gloB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.870e-18
Identity = 62/186 (33.33%), Postives = 81/186 (43.55%), Query Frame = 1
Query:   61 NYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKI-----KEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGS-AEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSN 600
            N+ YLI    T EA  +DP++ EK +  A+                DH GGN  +      +++   K  G     + G    V+ GD   +G  V +  L TP HT  HI         E PA+F+GDTLF AG G    G     +Y +    L  LP  T VY GH+Y   NL F L  EP N
Sbjct:   14 NFNYLIACPETGEALAIDPLDHEKTLATARVKGWQITQVLNTHEHHDHTGGNAAVIAATGAKLIAHHKAGG----RIAGVDRGVKAGDVIKVGKTVELECLDTPGHTMCHICLR---SHTEQPALFSGDTLFNAGAGNVHNGGDVNALYATFAEQLARLPDDTLVYPGHDYIENNLRFTLAREPDN 192          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_HAES2 (Hydroxyacylglutathione hydrolase OS=Haemophilus somnus (strain 2336) GN=gloB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.870e-18
Identity = 66/206 (32.04%), Postives = 95/206 (46.12%), Query Frame = 1
Query:   43 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            IP L DNY ++   E      V+D  E   + +  +                DH G   + K+  P + +YG +    +G T  ++ G       H++VL   T  HT  H+S+ V G       +F GDTLF AGCG+ F G   QM+ SL + L SLP  T V   HEYT+ NL FALT   +   +Q++L   +  R    P+
Sbjct:    5 IPALNDNYIWVYKRENLS-VIVIDIPEIAALSQFIQAQNLVIGALLITHNHRDHIGALAEFKQFYPHVHIYGPAECADQGVTQVIDAGRLIIDEYHIDVLP--TGGHTAQHLSFLVDGH------LFCGDTLFSAGCGRVFTGDYSQMFTSLQL-LKSLPDETIVCPAHEYTLGNLAFALTTGKNKSAVQKQLEKVKKLRAENNPS 200          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_HAES1 (Hydroxyacylglutathione hydrolase OS=Haemophilus somnus (strain 129Pt) GN=gloB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.870e-18
Identity = 65/206 (31.55%), Postives = 95/206 (46.12%), Query Frame = 1
Query:   43 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            IP L DNY ++   E      V+D  E   + +  +                DH G   + K+  P + +YG +    +G T  ++ G       H++VL   T  HT  H+S+ + G       +F GDTLF AGCG+ F G   QM+ SL + L SLP  T V   HEYT+ NL FALT   +   +Q++L   +  R    P+
Sbjct:    5 IPALNDNYIWVYKRENLS-VIVIDIPEIAALSQFIQAQNLVIGALLITHNHRDHIGALAEFKQFYPHVHIYGPAECADQGVTQVIDAGRLIIDEYHIDVLP--TGGHTAQHLSFLIDGH------LFCGDTLFSAGCGRVFTGDYSQMFTSLQL-LKSLPDETIVCPAHEYTLGNLAFALTTGKNKSAVQKQLEKVKKLRAENKPS 200          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ACTSZ (Hydroxyacylglutathione hydrolase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=gloB PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.308e-18
Identity = 65/206 (31.55%), Postives = 90/206 (43.69%), Query Frame = 1
Query:   43 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            I  L DNY ++   E      VVD  E E ++   ++               DH GG    K   P + VYG      KG T  V  G+  +    + V+   T  HT  H+SY   G       +F GDTLF AGCG+ F G+  QMY S+   L +LP  T V   HEYT+ NL FA +V      ++ +    + +R    P+
Sbjct:    5 ISALNDNYIWVYGRENCP-VIVVDITEIEPLLPFLRENKFAVEAVLLTHKHDDHVGGVAAFKRYFPDVPVYGPQECADKGATRIVNEGEIVTANYRIRVIP--TGGHTAQHVSYVTDG------CLFCGDTLFSAGCGRVFTGNYGQMYDSV-QRLKTLPDDTLVCPAHEYTLANLAFAESVMKDKSAVKNQRVLVEKKRAENRPS 200          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_BLOFL (Hydroxyacylglutathione hydrolase OS=Blochmannia floridanus GN=gloB PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.417e-17
Identity = 60/192 (31.25%), Postives = 90/192 (46.88%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGG-SLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSN 600
            M I     L+ NY ++I     ++  ++DP E  K+I+                   DH  G   + +  P IK+YG     N    T  V  GD   I  +  +  L+ P HT  HI +Y          +F+GDT+F AGCG    G  + MY+SL + +  LP+ T +Y GHEYT+ NL FA+++ P +
Sbjct:    1 MNIIKCISLQTNYIWIIYNHI-RQCIIIDPGESLKVIKMLNHLQLIPEAILLTHNHRDHTNGVFTLIQHFPKIKIYGPIETQNQNFATITVSEGDTLQI-LNQEIKVLNFPGHTPHHIGFYYKSW------LFSGDTIFSAGCGTIQTGYTQAMYKSL-LKIQCLPKNTLIYSGHEYTLLNLNFAISILPQD 183          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_HAEIN (Hydroxyacylglutathione hydrolase OS=Haemophilus influenzae GN=gloB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.417e-17
Identity = 69/217 (31.80%), Postives = 97/217 (44.70%), Query Frame = 1
Query:   34 IFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALT-------VEPSNVKLQQKLAWAQN-QRQAGLPT 660
            +F +P L DNY +L   E      +VD  E +K+    ++               DH  G    K+  P + +YG      KG T  V  G   +    ++V+   T  HTK H+S+ V      D  +F GD LF AGCG+ F G+   M++ L   L +LP  T V   HEYT+ NL FA T       VE S V+ Q+     Q  + +  LPT
Sbjct:    2 LFALPALNDNYIWLYQRENLP-LIIVDLPETDKLFAWLEKQNATIEAVLLTHEHDDHTQGVSAFKKRYPTVPIYGPQECEKKGATQIVNEGKILTANYQIDVIP--TGGHTKQHVSFLV------DNHLFCGDALFSAGCGRVFTGNYALMFEGL-QRLNTLPDETIVCPAHEYTLGNLAFAETVLVDKSAVEKSAVEKQRIFVETQRAENKPSLPT 208          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_METNO (Hydroxyacylglutathione hydrolase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=gloB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.123e-17
Identity = 58/203 (28.57%), Postives = 90/203 (44.33%), Query Frame = 1
Query:   49 CLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSL--DNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAG 651
            C  DN   L+ +  T   A +D  E   ++ A K+              +DH  G  ++K    G +V   +   D V      V  GD   +G+ V  +   TP H   H++Y+       +   F GDTLF  GCG+  E   E +++SL   L +LP  T +Y GH+Y + N  FAL  +P N  L+ +   A+  ++ G
Sbjct:    9 CRSDNIGVLLHDPVTSACAAIDVPEAGAVLRALKETGWRLTDILVTHRHFDHVEGIPEVKART-GARVTAPAKAGDAVPEVDATVREGDVVKVGSLVGTV-WETPGHCADHVTYWFE----RERLAFAGDTLFTLGCGRVMESPPEVLWRSLSRFL-ALPDETAIYSGHDYVLSNARFALAADPDNSNLKARAELAERVKRDG 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_HAEIG (Hydroxyacylglutathione hydrolase OS=Haemophilus influenzae (strain PittGG) GN=gloB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.033e-17
Identity = 61/185 (32.97%), Postives = 84/185 (45.41%), Query Frame = 1
Query:   34 IFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTV 588
            +F +P L DNY +L   E      +VD  E +K+     +               DH  G    K+  P + +YG      KG T  V  G   +    ++V+   T  HTK H+S+ V      D  +F GD LF AGCG+ F G+   M++ L   L +LP  T V   HEYT+ NL FA TV
Sbjct:    2 LFALPALNDNYIWLYQRENLP-LIIVDLPETDKLFAWLDKQNATVEAVLLTHEHDDHTQGVSAFKKRYPTVPIYGPQECEKKGATQIVNEGKILTANYQIDVIP--TGGHTKQHVSFLV------DNHLFCGDALFSAGCGRVFTGNYALMFEGL-QRLNTLPDETIVCPAHEYTLGNLAFAETV 176          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO2_SYNS97.514e-1930.48Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_HAEDU9.813e-1929.86Hydroxyacylglutathione hydrolase OS=Haemophilus du... [more]
GLO2_POLSJ4.870e-1833.33Hydroxyacylglutathione hydrolase OS=Polaromonas sp... [more]
GLO2_HAES24.870e-1832.04Hydroxyacylglutathione hydrolase OS=Haemophilus so... [more]
GLO2_HAES14.870e-1831.55Hydroxyacylglutathione hydrolase OS=Haemophilus so... [more]
GLO2_ACTSZ8.308e-1831.55Hydroxyacylglutathione hydrolase OS=Actinobacillus... [more]
GLO2_BLOFL1.417e-1731.25Hydroxyacylglutathione hydrolase OS=Blochmannia fl... [more]
GLO2_HAEIN2.417e-1731.80Hydroxyacylglutathione hydrolase OS=Haemophilus in... [more]
GLO2_METNO4.123e-1728.57Hydroxyacylglutathione hydrolase OS=Methylobacteri... [more]
GLO2_HAEIG7.033e-1732.97Hydroxyacylglutathione hydrolase OS=Haemophilus in... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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