FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO22_SCHPO (Probable hydroxyacylglutathione hydrolase C13B11.03c OS=Schizosaccharomyces pombe GN=SPCC13B11.03c PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.560e-32
Identity = 75/179 (41.90%), Postives = 107/179 (59.78%), Query Frame = 1
Query:   55 EDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXW----DHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFA 579
            +DNYAYL++ E T++AA+VDP E   ++   K+                   DH+GGN  +K+  P + +YGGS  N  G +H +++ +   IG +V + +LHTPCHT+  I +Y       + AVFTGDTLF AGCG+FFEG+A +M+ +L   L SLP  T +Y GHEYT  N+ FA
Sbjct:   15 QDNYAYLLLCEETRQAAIVDPAEVNVVMPILKKKLKNKEIDLQAILTTHHHADHSGGNLNLKKEFPHVTIYGGSDQN--GVSHVLQDKETLRIG-NVQIEALHTPCHTRDSICFYA--HSSNEHAVFTGDTLFNAGCGRFFEGTAAEMHIALNAVLSSLPNNTVIYPGHEYTKSNVKFA 188          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_TRIEI (Hydroxyacylglutathione hydrolase OS=Trichodesmium erythraeum (strain IMS101) GN=gloB PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.537e-32
Identity = 79/211 (37.44%), Postives = 112/211 (53.08%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLD--NVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKE-GEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAG 651
            M I+ +P L DNY +L+ +      AVVDP E   +I+  +               +DH G N+++ +  P +KVYGG  D   + G    ++ GD+      V  + L  P HT GHI+YY      GE   +F GDTLF  GCG+ FEG+  QM  SL   L +LP  T+++C HEYT+KNL FA+TV+  N  LQ +  WA+ +   G
Sbjct:    1 MDIYRLPALSDNYIFLLHDPNQNIGAVVDPAEVRPVIDKLESLGAELVTIFNTHHHFDHVGANKQLIQKFPQLKVYGGVEDRGRIPGQQVFLQEGDRVHFADRVGEV-LFVPGHTIGHIAYYFPSVAFGETGELFCGDTLFAGGCGRLFEGTPAQMVDSL-NKLRNLPDNTRIWCAHEYTLKNLQFAITVDKDNTDLQSR--WAEVKTARG 207          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_METCA (Hydroxyacylglutathione hydrolase OS=Methylococcus capsulatus GN=gloB PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.537e-32
Identity = 79/213 (37.09%), Postives = 117/213 (54.93%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            ++I  IP LEDNY YL+ E  +   A VDP     ++EA                  DH GGN ++K    G  V G + D   + G    +++G++F +G+  +   L  P HT GH++++      +D A+F GDTLF  GCG+ FEGSAEQM++SL   L +LP  T+V+C HEYT  N  FA+T+EP N  L++++   +  R+ G  T
Sbjct:    2 LEILQIPVLEDNYVYLLHEPGSGATAAVDPAVAGPVLEALDARGWRLGHVLNTHHHGDHVGGNLELKAAT-GCTVVGAAGDRHRIPGIDVALKDGEEFRLGS-ASARMLDVPGHTSGHVAFWFE----DDAALFCGDTLFALGCGRLFEGSAEQMWRSL-ERLRALPAETKVFCAHEYTQANARFAVTIEPGNAALRERVERVEALRREGAAT 207          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_NOSP7 (Hydroxyacylglutathione hydrolase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=gloB PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.011e-31
Identity = 76/214 (35.51%), Postives = 115/214 (53.74%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M++  +  L DNY +L+ ++    AAVVDP E + +++   +               DH GGN+++ E  P + VYGG+ D   + G    ++ GD+      +  + +  P HT+ HI+YY   +E  +   +F GDTLF  GCG+ FEG+  QM  SL   L SLP  T+++C HEYT+KNL FALTV+  N  LQ++    +  R  G  T
Sbjct:    1 MQVIRLEALSDNYIFLLYDDKRNIAAVVDPAEAQPVLKKLAELKADLVAIFNTHHHNDHVGGNKQLIEKFPQLIVYGGAEDRGRIPGQKVFLQQGDRVEFADRIAEV-IFVPGHTRAHIAYYFPPQEASETGDLFCGDTLFSGGCGRLFEGTPTQMVDSLS-KLRSLPDNTRIWCAHEYTLKNLQFALTVDGDNADLQRRFNEVKAYRSRGEAT 212          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_KLEP7 (Hydroxyacylglutathione hydrolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=gloB PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.841e-31
Identity = 72/191 (37.70%), Postives = 105/191 (54.97%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSN 600
            M +  IP  +DNY + ++ E      +VDP E   ++ A ++               DH GG ++++E  P I VYG +    KG T  V +GD+ SI  H +     TP HT GHI YY       +P +F GDT+F  GCG+ FEG+AEQMYQS  + + +LP+ T + C HEYT+ N+ FAL++ P +
Sbjct:    1 MNLISIPAFQDNYIW-VLSENNGRCIIVDPGEAAPVLAAIEENQWQPEAILLTHHHQDHVGGVKQLREKFPSIVVYGPAETQDKGVTQVVGDGDRLSILGH-DFSIFSTPGHTLGHICYY------SEPYLFCGDTMFSGGCGRLFEGTAEQMYQSF-MKINALPEETLICCAHEYTLANMKFALSILPDD 182          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_CYAA5 (Hydroxyacylglutathione hydrolase OS=Cyanothece sp. (strain ATCC 51142) GN=gloB PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.841e-31
Identity = 79/217 (36.41%), Postives = 112/217 (51.61%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQV--ENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLPT 660
            M+I  +P L DNY +L+ +     AAVVDP   E ++    Q               DH GGN+K+ E  P + VYG   D  +    QV  E GD          +    P HT+GHI+YY    E E+   +F GDT+F  GCG+ FEG+  QM +S+   L +LP  T+++C HEYT+ NL FA+TV+  N  LQ   Q +  A+   +A +P+
Sbjct:    1 MEIKRLPALSDNYIFLLHDANNNTAAVVDPAVAEPVLNCLDQLGAKLIAIFNTHHHADHVGGNKKLMEQFPDLCVYGSKEDQGRIPGQQVFLEEGDTVEFAGKTGKVYF-VPGHTRGHIAYYFPPNENEEIGDLFCGDTIFAGGCGRLFEGTPAQMVESIG-KLRNLPDHTRIWCAHEYTLNNLKFAVTVDKDNSDLQIRYQDVIKARKNEEATVPS 215          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PELUB (Hydroxyacylglutathione hydrolase OS=Pelagibacter ubique GN=gloB PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.017e-31
Identity = 78/218 (35.78%), Postives = 115/218 (52.75%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIG-------AHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M+I  I CL+DNY+YLI+++    A V+DP E + +I+  +               +DH GGN+++KE       YG S+   KG   ++   D   +G        +      H P HT GHI +Y   +E    +VFTGDTLF  GCGK FEG+  QMY SL + + +LP+ T++YCGHEYT +N  F +  +  N  L+ K+     + +  LPT
Sbjct:    1 MEIQIIRCLQDNYSYLIVDKAKNIACVIDPSEAKPVIKYLEDKNIHLKYILNTHHHYDHVGGNKELKEK------YGASVIGYKGDKDRIPEID-ILVGDQDIWHEENFQAKIFHIPGHTLGHICFYFYNEE----SVFTGDTLFSLGCGKIFEGTYSQMYNSL-MKIKALPEKTKIYCGHEYTKQNSKFCIAHDQDNENLKVKIKLIDEKLEKNLPT 206          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_KLEP3 (Hydroxyacylglutathione hydrolase OS=Klebsiella pneumoniae (strain 342) GN=gloB PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.557e-31
Identity = 71/191 (37.17%), Postives = 105/191 (54.97%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSN 600
            M +  IP  +DNY + ++ E      +VDP E   ++ A ++               DH GG ++++E  P I VYG +    KG T  + +GD+ SI  H +     TP HT GHI YY       +P +F GDT+F  GCG+ FEG+AEQMYQS  + + +LP+ T + C HEYT+ N+ FAL++ P +
Sbjct:    1 MNLISIPAFQDNYIW-VLSENNGRCIIVDPGEAAPVLAAIEENQWQPEAILLTHHHQDHVGGVKQLREKFPSIVVYGPAETQDKGVTQVLGDGDRLSILGH-DFSIFSTPGHTLGHICYY------SEPYLFCGDTMFSGGCGRLFEGTAEQMYQSF-MKINALPEETLICCAHEYTLANMKFALSILPDD 182          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_XANC5 (Hydroxyacylglutathione hydrolase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=gloB PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.118e-30
Identity = 75/211 (35.55%), Postives = 115/211 (54.50%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M++  +P  +DNY + +I    + A +VDP + E ++ AA+                DH GG  ++++  P ++++G + + +    HQV +G++  +   V    L  P HT+ HI++   G       +F+GDTLF  GCG+ FEG+A QM+ SL   L SLP  T V CGHEYT+ N  FAL V+P+N  LQ++   AQ  R A  PT
Sbjct:    1 MRLIALPAFDDNYIWALIAADGR-AIIVDPGQAEPVLAAAQHQGLVPSAVLLTHHHGDHIGGVAELQQRWPDLELFGPADERIPADAHQVGHGERLRL-LDVEFQVLQVPGHTRSHIAFVADGY------LFSGDTLFSLGCGRMFEGTAPQMFDSL-QRLASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPT 202          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_VIBCM (Hydroxyacylglutathione hydrolase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=gloB PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.460e-30
Identity = 83/214 (38.79%), Postives = 113/214 (52.80%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKL---QQKLAWAQNQRQAGLPT 660
            ++I  IP  +DNY +LI +   ++ AVVDP   E ++   KQ               DH GG  ++    P I V G + + +   TH VE+GD+  +      + L  P HT GHI Y   GK      +F GD LF AGCG+ FEG+ EQM+ SL   L SLP+ TQVY  HEYT  N+ FAL VEP N +L   + +++  + Q Q  LPT
Sbjct:    2 LQIKSIPAFDDNYIWLI-QNRDRDCAVVDPGSAEPVLAYLKQHDLNLKAVLITHHHHDHIGGVAELVHQFPEIHVVGPAQEPIPTLTHPVEDGDQIELFDE-RFMVLGLPGHTLGHIGYVGDGK------LFCGDVLFSAGCGRVFEGTMEQMFSSLNKLL-SLPEETQVYSAHEYTAANVAFALAVEPENEQLHIYRDEVSRLRAQNQPTLPT 206          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO22_SCHPO1.560e-3241.90Probable hydroxyacylglutathione hydrolase C13B11.0... [more]
GLO2_TRIEI4.537e-3237.44Hydroxyacylglutathione hydrolase OS=Trichodesmium ... [more]
GLO2_METCA4.537e-3237.09Hydroxyacylglutathione hydrolase OS=Methylococcus ... [more]
GLO2_NOSP71.011e-3135.51Hydroxyacylglutathione hydrolase OS=Nostoc punctif... [more]
GLO2_KLEP73.841e-3137.70Hydroxyacylglutathione hydrolase OS=Klebsiella pne... [more]
GLO2_CYAA53.841e-3136.41Hydroxyacylglutathione hydrolase OS=Cyanothece sp.... [more]
GLO2_PELUB5.017e-3135.78Hydroxyacylglutathione hydrolase OS=Pelagibacter u... [more]
GLO2_KLEP38.557e-3137.17Hydroxyacylglutathione hydrolase OS=Klebsiella pne... [more]
GLO2_XANC51.118e-3035.55Hydroxyacylglutathione hydrolase OS=Xanthomonas ca... [more]
GLO2_VIBCM1.460e-3038.79Hydroxyacylglutathione hydrolase OS=Vibrio cholera... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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