FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_VIBCH (Hydroxyacylglutathione hydrolase OS=Vibrio cholerae GN=gloB PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.460e-30
Identity = 83/214 (38.79%), Postives = 113/214 (52.80%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKL---QQKLAWAQNQRQAGLPT 660
            ++I  IP  +DNY +LI +   ++ AVVDP   E ++   KQ               DH GG  ++    P I V G + + +   TH VE+GD+  +      + L  P HT GHI Y   GK      +F GD LF AGCG+ FEG+ EQM+ SL   L SLP+ TQVY  HEYT  N+ FAL VEP N +L   + +++  + Q Q  LPT
Sbjct:    2 LQIKSIPAFDDNYIWLI-QNRDRDCAVVDPGSAEPVLAYLKQHDLNLKAVLITHHHHDHIGGVAELVHQFPEIHVVGPAQEPIPTLTHPVEDGDQIELFDE-RFMVLGLPGHTLGHIGYVGDGK------LFCGDVLFSAGCGRVFEGTMEQMFSSLNKLL-SLPEETQVYSAHEYTAANVAFALAVEPENEQLHIYRDEVSRLRAQNQPTLPT 206          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_VIBC3 (Hydroxyacylglutathione hydrolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gloB PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.460e-30
Identity = 83/214 (38.79%), Postives = 113/214 (52.80%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKL---QQKLAWAQNQRQAGLPT 660
            ++I  IP  +DNY +LI +   ++ AVVDP   E ++   KQ               DH GG  ++    P I V G + + +   TH VE+GD+  +      + L  P HT GHI Y   GK      +F GD LF AGCG+ FEG+ EQM+ SL   L SLP+ TQVY  HEYT  N+ FAL VEP N +L   + +++  + Q Q  LPT
Sbjct:    2 LQIKSIPAFDDNYIWLI-QNRDRDCAVVDPGSAEPVLAYLKQHDLNLKAVLITHHHHDHIGGVAELVHQFPEIHVVGPAQEPIPTLTHPVEDGDQIELFDE-RFMVLGLPGHTLGHIGYVGDGK------LFCGDVLFSAGCGRVFEGTMEQMFSSLNKLL-SLPEETQVYSAHEYTAANVAFALAVEPENEQLHIYRDEVSRLRAQNQPTLPT 206          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PHOLL (Hydroxyacylglutathione hydrolase OS=Photorhabdus luminescens subsp. laumondii GN=gloB PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.461e-30
Identity = 75/213 (35.21%), Postives = 109/213 (51.17%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNV--KLQQKLAWAQNQRQAGLPT 660
            M++  IP L DNY +L+ +E  +   +VDP E + +++  +                DH GG   I +  P + VYG +    KG T  V  GD  + G H +   +  P HT GHI++Y      + P +F GDTLF  GCG+ FEG+AEQMY S+   +  LP  T + C HEYT+ N+ FA  V P+    + QQK+   +   Q  +PT
Sbjct:    1 MELISIPALSDNYIWLLCDEN-RHVVIVDPAESQPVLDTLESRGWIPDAILLTHHHHDHVGGVPGIIDRFPELLVYGPAETQSKGATIIVCGGDSINFG-HFSFQIIDVPGHTLGHIAFY------QAPYLFCGDTLFSGGCGRLFEGTAEQMYTSI-GKIAELPDDTLICCAHEYTISNMKFAHAVLPNQTISEYQQKVIRMRENNQPTIPT 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_XANCP (Hydroxyacylglutathione hydrolase OS=Xanthomonas campestris pv. campestris GN=gloB PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.236e-29
Identity = 72/211 (34.12%), Postives = 113/211 (53.55%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M++  +P  +DNY + ++    + A +VDP +   ++EAA++               DH GG  ++++  P +++YG   + +   T  V +GD  +    ++   L  P HT+ H++Y   G       +F+GDTLF  GCG+ FEG+  QM+ +L   L SLP  T V CGHEYT+ N  FAL V+P+N  LQ++   AQ  R A  PT
Sbjct:    1 MRLTALPAFDDNYIWALVANDGR-AVIVDPGQAAPVLEAAQREGFTPVAALLTHHHADHIGGVAELQQHFPALELYGPDDERMPSATRHVAHGDTVT-ALGIDFAVLEVPGHTRSHVAYVGDGH------LFSGDTLFSLGCGRMFEGTPPQMFDAL-QRLASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPT 202          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_XANCB (Hydroxyacylglutathione hydrolase OS=Xanthomonas campestris pv. campestris (strain B100) GN=gloB PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.236e-29
Identity = 72/211 (34.12%), Postives = 113/211 (53.55%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M++  +P  +DNY + ++    + A +VDP +   ++EAA++               DH GG  ++++  P +++YG   + +   T  V +GD  +    ++   L  P HT+ H++Y   G       +F+GDTLF  GCG+ FEG+  QM+ +L   L SLP  T V CGHEYT+ N  FAL V+P+N  LQ++   AQ  R A  PT
Sbjct:    1 MRLTALPAFDDNYIWALVANDGR-AVIVDPGQAAPVLEAAQREGFTPVAALLTHHHADHIGGVAELQQHFPALELYGPDDERMPSATRHVAHGDTVT-ALGIDFAVLEVPGHTRSHVAYVGDGH------LFSGDTLFSLGCGRMFEGTPPQMFDAL-QRLASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPT 202          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_XANC8 (Hydroxyacylglutathione hydrolase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=gloB PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.236e-29
Identity = 72/211 (34.12%), Postives = 113/211 (53.55%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M++  +P  +DNY + ++    + A +VDP +   ++EAA++               DH GG  ++++  P +++YG   + +   T  V +GD  +    ++   L  P HT+ H++Y   G       +F+GDTLF  GCG+ FEG+  QM+ +L   L SLP  T V CGHEYT+ N  FAL V+P+N  LQ++   AQ  R A  PT
Sbjct:    1 MRLTALPAFDDNYIWALVANDGR-AVIVDPGQAAPVLEAAQREGFTPVAALLTHHHADHIGGVAELQQHFPALELYGPDDERMPSATRHVAHGDTVT-ALGIDFAVLEVPGHTRSHVAYVGDGH------LFSGDTLFSLGCGRMFEGTPPQMFDAL-QRLASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPT 202          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_VIBHB (Hydroxyacylglutathione hydrolase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=gloB PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.236e-29
Identity = 76/211 (36.02%), Postives = 108/211 (51.18%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            ++I  IP   DNY +LI + + K  AVVDP + + ++E  +                DH GG   +    P + V G   + +   T+ +E GDK  +   + ++ L  P HT GHI Y   GK      +F GD LF AGCG+ FEG+ EQM++SL   +  LP+ T+V+C HEYT  N+ FAL VEP N  L+Q        R   +PT
Sbjct:    2 LEIKSIPAFNDNYIWLI-QNSDKRCAVVDPGDAKPVLEYLQANELTLEAILITHHHNDHIGGVSDLVRAFPHVSVVGPKAEPIPTLTNAMEEGDKLELFGEIFMV-LGLPGHTLGHIGYVGDGK------LFCGDVLFSAGCGRIFEGTPEQMFESLSKIM-KLPEETEVFCAHEYTASNVAFALAVEPDNEHLRQYRDDVNRLRGLNIPT 203          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PSEAE (Hydroxyacylglutathione hydrolase OS=Pseudomonas aeruginosa GN=gloB PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.236e-29
Identity = 79/208 (37.98%), Postives = 113/208 (54.33%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEA--AKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQ 645
            ++I  +P   DNY +L+ + T++  AVVDP +  K +EA  A                 DH GG   +KE+  G +V G + + +      +E+G++  +   V  +  H P HT GHI+YY      E P +F GDTLF AGCG+ FEG+  QM+ SL   L +LP  T+VYC HEYT+ NL FAL VEP N  L+++   A   R+
Sbjct:    2 IQIDALPAFNDNYIWLLQDATSRRCAVVDPGDA-KPVEAWLAAHPDWRLSDILVTHHHHDHVGGVAALKELT-GARVLGPANEKIPARDLALEDGERVEVLGLVFEI-FHVPGHTLGHIAYY---HPAETPLLFCGDTLFAAGCGRLFEGTPAQMHHSLA-RLAALPANTRVYCTHEYTLSNLRFALAVEPDNAALRERFEEATRLRE 202          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PSEA8 (Hydroxyacylglutathione hydrolase OS=Pseudomonas aeruginosa (strain LESB58) GN=gloB PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.236e-29
Identity = 79/208 (37.98%), Postives = 113/208 (54.33%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEA--AKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQ 645
            ++I  +P   DNY +L+ + T++  AVVDP +  K +EA  A                 DH GG   +KE+  G +V G + + +      +E+G++  +   V  +  H P HT GHI+YY      E P +F GDTLF AGCG+ FEG+  QM+ SL   L +LP  T+VYC HEYT+ NL FAL VEP N  L+++   A   R+
Sbjct:    2 IQIDALPAFNDNYIWLLQDATSRRCAVVDPGDA-KPVEAWLAAHPDWRLSDILVTHHHHDHVGGVAALKELT-GARVLGPANEKIPARDLALEDGERVEVLGLVFEI-FHVPGHTLGHIAYY---HPAETPLLFCGDTLFAAGCGRLFEGTPAQMHHSLA-RLAALPANTRVYCTHEYTLSNLRFALAVEPDNAALRERFEEATRLRE 202          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_VIBPA (Hydroxyacylglutathione hydrolase OS=Vibrio parahaemolyticus GN=gloB PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.614e-29
Identity = 76/211 (36.02%), Postives = 107/211 (50.71%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            ++I  IP   DNY +LI + + K  AVVDP + + +++  +                DH GG   +    P + V G   + +   T  +E GDK  +   +  L L  P HT GHI Y        D  +F GD LF AGCG+ FEG+ EQM++SL   + +LP+ TQV+C HEYT  N+ FAL VEP N +L+Q        R   +PT
Sbjct:    2 LEIKSIPAFNDNYIWLI-QNSDKRCAVVDPGDAQPVLDYLQANELTLEAILVTHHHNDHIGGVPDLVRAFPHVTVVGPKAEPIPTLTTPMEEGDKLELFGEI-FLVLGLPGHTLGHIGYV------GDSKLFCGDVLFSAGCGRIFEGTPEQMFESLS-KIAALPEETQVFCAHEYTASNVAFALAVEPDNEQLRQYRDDVNRLRALNIPT 203          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO2_VIBCH1.460e-3038.79Hydroxyacylglutathione hydrolase OS=Vibrio cholera... [more]
GLO2_VIBC31.460e-3038.79Hydroxyacylglutathione hydrolase OS=Vibrio cholera... [more]
GLO2_PHOLL9.461e-3035.21Hydroxyacylglutathione hydrolase OS=Photorhabdus l... [more]
GLO2_XANCP1.236e-2934.12Hydroxyacylglutathione hydrolase OS=Xanthomonas ca... [more]
GLO2_XANCB1.236e-2934.12Hydroxyacylglutathione hydrolase OS=Xanthomonas ca... [more]
GLO2_XANC81.236e-2934.12Hydroxyacylglutathione hydrolase OS=Xanthomonas ca... [more]
GLO2_VIBHB1.236e-2936.02Hydroxyacylglutathione hydrolase OS=Vibrio harveyi... [more]
GLO2_PSEAE1.236e-2937.98Hydroxyacylglutathione hydrolase OS=Pseudomonas ae... [more]
GLO2_PSEA81.236e-2937.98Hydroxyacylglutathione hydrolase OS=Pseudomonas ae... [more]
GLO2_VIBPA1.614e-2936.02Hydroxyacylglutathione hydrolase OS=Vibrio parahae... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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