FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHEPA (Hydroxyacylglutathione hydrolase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=gloB PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.614e-29
Identity = 85/218 (38.99%), Postives = 108/218 (49.54%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAA-----VVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEK-IKEMVPGIKVYGGSLDNVKGCTHQ-VENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            + I  +    DNY ++   +    A      VVDP + + +I+   Q               DH GG E+ I+     I VYG   +N+ G  H  V NGD     A +N   +  P HT GHI+Y +      +  +F GDTLF AGCG+ FEGSAEQMYQSL   LG LP  T+V C HEYT+ NL FA  VEP+N  L      AQ  R   LPT
Sbjct:    2 LHITPLAAFNDNYIWVFQSQQNTGAESSGIYVVDPGDGQVVIDYLIQTGQALLGILITHHHHDHTGGIEQLIRRFGAQIAVYGPQSENIIGVNHPIVANGDISLTNAGLNAKVIQLPGHTLGHIAYLI------EDVLFCGDTLFSAGCGRIFEGSAEQMYQSLS-ELGQLPDNTKVCCAHEYTIANLAFANRVEPNNAALIDYTKKAQALRAQNLPT 212          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_VIBVU (Hydroxyacylglutathione hydrolase OS=Vibrio vulnificus GN=gloB PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.108e-29
Identity = 78/211 (36.97%), Postives = 106/211 (50.24%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            ++I  IP   DNY +LI + + +  AVVDP + + ++   +Q               DH GG   +    P + V G   + +   TH VE+GD+  +      L L    HT GHI Y   GK      +F GD LF AGCG+ FEG+A+QM+ SL   L +LP+ T+V+C HEYT  N+ FAL VEP N  L Q        R   LPT
Sbjct:    2 LEIKSIPAFNDNYIWLI-QNSDQRCAVVDPGDAKPVLHYIEQHQLTLEAILITHHHNDHIGGVADLVRAFPNVNVVGPKAEPIPTLTHPVEDGDRLELFDET-FLVLGLGGHTLGHIGYVGDGK------LFCGDVLFSAGCGRIFEGTAQQMFDSLNKLL-ALPEETEVFCAHEYTASNVAFALAVEPDNELLHQYRDTVNRLRAQNLPT 203          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ALISL (Hydroxyacylglutathione hydrolase OS=Aliivibrio salmonicida (strain LFI1238) GN=gloB PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.108e-29
Identity = 81/209 (38.76%), Postives = 104/209 (49.76%), Query Frame = 1
Query:   43 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQ---KLAWAQNQRQAGLPT 660
            IP   DNY +LI         VVDP E   ++   K+               DH GG  ++    P I V G   + +   TH V +GD   +  +   + L    HTKGHI+Y        D  +F GDTLF AGCG+ FEG+AEQM+ SL   L +LP  T+VYC HEYT  NL FAL VEP N  LQQ   K+   +   +A +PT
Sbjct:    7 IPAFNDNYIWLI-HNNDNHCVVVDPGEAAPVLACLKEHGLILDAILITHHHHDHIGGVPELVRQFPNINVVGPENEPIPTLTHPVGDGDFVEL-FNEKFMVLGVEGHTKGHIAYI------GDEKLFCGDTLFSAGCGRLFEGTAEQMFHSL-QKLAALPDETEVYCAHEYTASNLAFALAVEPDNDYLQQYREKVLRLRANGKATIPT 206          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_AERHH (Hydroxyacylglutathione hydrolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=gloB PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.108e-29
Identity = 77/210 (36.67%), Postives = 108/210 (51.43%), Query Frame = 1
Query:   34 IFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQ-VENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +  +P   DNY +LI  E      VVDP + E ++E                   DH GG   +    P  ++YG  LD +     Q +++GD+ +    +++  +H P HT GHI+YY  G       +F GDTLF AGCG+ FEG+  QM+ SL   L +LP  T +YC HEYT+ NL FA  VEP N  +QQ++      RQ GLP+
Sbjct:    4 VITVPAFNDNYIWLIRHEN--HCLVVDPGDAEPVLERLAALDLQLDAILLTHHHHDHVGGVTALLGHFPHARLYGPKLDPMPAHHGQWLDDGDQINWHG-LSLEVIHVPGHTHGHIAYYGHGM------LFCGDTLFSAGCGRLFEGTPAQMHASL-QRLAALPDDTLIYCAHEYTLSNLRFAYAVEPDNHAIQQRIGLISKLRQQGLPS 203          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO22_VIBVY (Hydroxyacylglutathione hydrolase 2 OS=Vibrio vulnificus (strain YJ016) GN=gloB2 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.108e-29
Identity = 78/211 (36.97%), Postives = 106/211 (50.24%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            ++I  IP   DNY +LI + + +  AVVDP + + ++   +Q               DH GG   +    P + V G   + +   TH VE+GD+  +      L L    HT GHI Y   GK      +F GD LF AGCG+ FEG+A+QM+ SL   L +LP+ T+V+C HEYT  N+ FAL VEP N  L Q        R   LPT
Sbjct:    2 LEIKSIPAFNDNYIWLI-QNSDQRCAVVDPGDAKPVLHYIEQHQLTLEAILITHHHNDHIGGVADLVRAFPNVNVVGPKAEPIPTLTHPVEDGDRLELFDET-FLVLGLGGHTLGHIGYVGDGK------LFCGDVLFSAGCGRIFEGTAQQMFDSLNKLL-ALPEETEVFCAHEYTASNVAFALAVEPDNELLHQYRDTVNRLRAQNLPT 203          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_XANAC (Hydroxyacylglutathione hydrolase OS=Xanthomonas axonopodis pv. citri GN=gloB PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.753e-29
Identity = 72/211 (34.12%), Postives = 113/211 (53.55%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M++  +P  +DNY + ++    + A +VDP + E ++ AA++               DH GG  ++++  P + ++G + + +    H V  G++  +   V    +  P HT+ HI++   G       +F+GDTLF  GCG+ FEG+A QM+ SL   L SLP  T V CGHEYT+ N  FAL V+P+N  LQ++   AQ  R A  PT
Sbjct:    1 MRLIALPAFDDNYIWALVAADGR-AIIVDPGQAEPVLAAAQRQGLVPSAVLLTHHHGDHIGGVAELQQRWPDLALFGPADERIPTNAHHVGRGERLRL-LDVEFQVIKVPGHTRSHIAFLADGH------LFSGDTLFSLGCGRMFEGTAPQMFDSL-QRLASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPT 202          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PSEPG (Hydroxyacylglutathione hydrolase OS=Pseudomonas putida (strain GB-1) GN=gloB PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.009e-29
Identity = 74/199 (37.19%), Postives = 111/199 (55.78%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIE-AAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQK 618
            ++I  +P   DNY +L+ +   +  AVVDP +   +    A                 DH GG E++K++  G +V G + + + G    ++ GDK  + G    VL++  P HT GHI+++  G     P +F+GDTLF AGCG+ FEG+ EQM  +L   L +LP+ T+VYC HEYT+ NL FA  VEP+N  +QQ+
Sbjct:    2 IQIDALPAFSDNYIWLLQDTAKRRCAVVDPGDAAPVERWLAANPEWVLSDILVTHHHNDHVGGVERLKQL-SGARVCGPANERIPGRDLALDEGDKVDVLGVTFQVLAV--PGHTLGHIAFFSDGPP--TPVLFSGDTLFAAGCGRMFEGTPEQMQPALA-RLAALPEQTEVYCAHEYTLSNLRFAKAVEPTNTHVQQR 194          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_MARAV (Hydroxyacylglutathione hydrolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=gloB PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.009e-29
Identity = 73/212 (34.43%), Postives = 111/212 (52.36%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            M+I  +P   DNY + +    + +  +VDP + + +++                   DH GG +++++  P +++ G +    KG T+ V  GD+    G   NVL++  P HT  HI+YY   +  + P +F GDTLFV GCG+ FEG+ EQM+ SL  TL  LP  T VYC HEYT+ NL FA    P +  L +     ++ R+ G PT
Sbjct:    1 MRIHPVPAFSDNYIWCLTNLESGKTLIVDPGQAKPVLDYLSDSGFSADTILITHHHPDHTGGVKELQQQYPDLRIVGPTDSPFKGATNTVHAGDEVVWEGITFNVLAV--PGHTLDHIAYYSDTQVNDKPVLFCGDTLFVCGCGRLFEGTPEQMHTSL-QTLRDLPDNTAVYCAHEYTLANLRFARHWLPEDKALAEFENACKDLRERGKPT 209          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PSEA7 (Hydroxyacylglutathione hydrolase OS=Pseudomonas aeruginosa (strain PA7) GN=gloB PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.046e-28
Identity = 77/208 (37.02%), Postives = 113/208 (54.33%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEA--AKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQ 645
            ++I  +P   DNY +L+ + T++  AVVDP +   + EA  A                 DH GG   +KE+  G +V G + + +      +E+G++  +   V  +  H P HT GHI+YY      + P +F GDTLF AGCG+ FEG+  QM++SL   L +LP  T+VYC HEYT+ NL FAL VEP N  L+++   A   R+
Sbjct:    2 IQIDALPAFNDNYIWLLQDATSRRCAVVDPGDARPV-EAWLAAHPDWRLSDILVTHHHHDHVGGVAALKEL-SGARVLGPANEKIPARDLALEDGERVEVLGLVFEI-FHVPGHTLGHIAYY---HAAQTPLLFCGDTLFAAGCGRLFEGTPAQMHRSLA-RLAALPANTRVYCTHEYTLSNLRFALAVEPENQALRERFEEATRLRE 202          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PSEE4 (Hydroxyacylglutathione hydrolase OS=Pseudomonas entomophila (strain L48) GN=gloB PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.366e-28
Identity = 74/199 (37.19%), Postives = 110/199 (55.28%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIE-AAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQK 618
            ++I  +P   DNY +L+ +   +  AVVDP +   ++    K                DH GG E +K    G +V+G + + +      +E+G +  + G   +VL++  P HT GHI+YY    +   P +F+GDTLF AGCG+ FEG+ EQM+ SL   L +LP+ TQVYC HEYT+ NL FA  VEP +  +QQ+
Sbjct:    2 IQIDALPAFSDNYIWLLQDTANRRCAVVDPGDDAPVLAWLGKHPGWVLEAILVTHHHHDHVGGVEALKHAT-GAQVFGPANERIPARDIALEDGAQVHVLGLAFDVLAM--PGHTLGHIAYYTA--QSPTPLLFSGDTLFAAGCGRLFEGTPEQMHHSL-QRLAALPEQTQVYCAHEYTLSNLRFARAVEPHSEPVQQR 194          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO2_SHEPA1.614e-2938.99Hydroxyacylglutathione hydrolase OS=Shewanella pea... [more]
GLO2_VIBVU2.108e-2936.97Hydroxyacylglutathione hydrolase OS=Vibrio vulnifi... [more]
GLO2_ALISL2.108e-2938.76Hydroxyacylglutathione hydrolase OS=Aliivibrio sal... [more]
GLO2_AERHH2.108e-2936.67Hydroxyacylglutathione hydrolase OS=Aeromonas hydr... [more]
GLO22_VIBVY2.108e-2936.97Hydroxyacylglutathione hydrolase 2 OS=Vibrio vulni... [more]
GLO2_XANAC2.753e-2934.12Hydroxyacylglutathione hydrolase OS=Xanthomonas ax... [more]
GLO2_PSEPG8.009e-2937.19Hydroxyacylglutathione hydrolase OS=Pseudomonas pu... [more]
GLO2_MARAV8.009e-2934.43Hydroxyacylglutathione hydrolase OS=Marinobacter a... [more]
GLO2_PSEA71.046e-2837.02Hydroxyacylglutathione hydrolase OS=Pseudomonas ae... [more]
GLO2_PSEE41.366e-2837.19Hydroxyacylglutathione hydrolase OS=Pseudomonas en... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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