FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PHOPR (Hydroxyacylglutathione hydrolase OS=Photobacterium profundum GN=gloB PE=3 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 1.784e-28
Identity = 72/206 (34.95%), Postives = 102/206 (49.51%), Query Frame = 1 
Query:   43 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            IP   DNY +LI   +     VVDP +   +++  ++               DH GG  ++K   P + V G + + + G +  VE+GD+  +      + L  P HT GH++Y   GK      +F GDTLF  GCG+ FEG+  QM+QSL   L +LP  T++YC HEYT  NL FAL  E  N  LQ+        R  G+ T
Sbjct:    7 IPAFNDNYIWLI-HNSHNHCVVVDPGDATPVLKVLEEQSLTLDAILITHHHHDHIGGISELKRHYPNLNVVGPASEPIPGISQSVEDGDQVELFGE-RFMVLGVPGHTLGHVAYVGDGK------LFCGDTLFSVGCGRLFEGTPAQMFQSL-KKLAALPDETEIYCAHEYTSSNLAFALVAEQDNPHLQRYREDVSRMRAQGIST 203
[Close]
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECOLI (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain K12) GN=gloB PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.784e-28
Identity = 77/214 (35.98%), Postives = 114/214 (53.27%), Query Frame = 1 
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204
[Close]
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECOHS (Hydroxyacylglutathione hydrolase OS=Escherichia coli O9:H4 (strain HS) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.784e-28
Identity = 77/214 (35.98%), Postives = 114/214 (53.27%), Query Frame = 1 
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204
[Close]
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECODH (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain K12 / DH10B) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.784e-28
Identity = 77/214 (35.98%), Postives = 114/214 (53.27%), Query Frame = 1 
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204
[Close]
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECOBW (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain K12 / BW2952) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.784e-28
Identity = 77/214 (35.98%), Postives = 114/214 (53.27%), Query Frame = 1 
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204
[Close]
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECO5E (Hydroxyacylglutathione hydrolase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.784e-28
Identity = 77/214 (35.98%), Postives = 114/214 (53.27%), Query Frame = 1 
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204
[Close]
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECO57 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O157:H7 GN=gloB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.784e-28
Identity = 77/214 (35.98%), Postives = 114/214 (53.27%), Query Frame = 1 
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204
[Close]
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHISS (Hydroxyacylglutathione hydrolase OS=Shigella sonnei (strain Ss046) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.330e-28
Identity = 77/214 (35.98%), Postives = 114/214 (53.27%), Query Frame = 1 
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-NKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204
[Close]
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_SHIB3 (Hydroxyacylglutathione hydrolase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.330e-28
Identity = 77/214 (35.98%), Postives = 114/214 (53.27%), Query Frame = 1 
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-NKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204
[Close]
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_RHOPS (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas palustris (strain BisB5) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.330e-28
Identity = 77/208 (37.02%), Postives = 107/208 (51.44%), Query Frame = 1 
Query:   43 IPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            +PCL DN+ YLI + ++   A +D  E   +I A ++               DH GG  ++K+     +V      N K      +VE GD   +G  ++   L TP HT  HISY       +D A+F  DTLF  GCG+ FEG+   M++SL + L  LP   ++YCGHEYT  N+ FALT+EP N  LQ +    + QR AG PT
Sbjct:    8 VPCLTDNFGYLIHDPSSGATASIDAPEAAPLIAALEKEGWKLTDILVTHHHGDHVGGVAELKKKYQ-CRVVAPHDANAKIADIDLRVEEGDVVRVGG-LSARVLETPGHTLDHISYVFD----DDRALFAADTLFSIGCGRVFEGTYPMMWESL-LKLRELPDDFKLYCGHEYTASNVKFALTIEPDNAALQARAKQVEQQRAAGQPT 208
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO2_PHOPR1.784e-2834.95Hydroxyacylglutathione hydrolase OS=Photobacterium... [more]
GLO2_ECOLI1.784e-2835.98Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECOHS1.784e-2835.98Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECODH1.784e-2835.98Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECOBW1.784e-2835.98Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO5E1.784e-2835.98Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO571.784e-2835.98Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_SHISS2.330e-2835.98Hydroxyacylglutathione hydrolase OS=Shigella sonne... [more]
GLO2_SHIB32.330e-2835.98Hydroxyacylglutathione hydrolase OS=Shigella boydi... [more]
GLO2_RHOPS2.330e-2837.02Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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